Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148243274

Identifier: 148243274

GI number: 148243274

Start: 1884021

End: 1884572

Strand: Direct

Name: 148243274

Synonym: SynRCC307_2175

Alternate gene names: NA

Gene position: 1884021-1884572 (Clockwise)

Preceding gene: 148243272

Following gene: 148243278

Centisome position: 84.68

GC content: 60.33

Gene sequence:

>552_bases
GTGGGAATGGTTCTGGCCTTCCGTGCAACGCAAAGCCTGAATCTGGCGGTCCGGCAAGGAGCTGACGACCTGCCGGCTTA
CTTGCAAGAACAACAGCGTGTGGTGGGCGCATTGCTGAGCCCCGAACAGCTGGAACCGCTGGGAGAAGGGCGCTACCGCT
ACAGCGTCAGCCCCTTGCAACTCTTTCAGTTGCGCATCATGCCCACCGTGGAAATTCAGGTGGAGCAACAGGCCAGCCGC
CTGGAGATGCGCTCTCTGCAATGCAATCTCGATGGGGTGCCGGGGCTTGACGACGATTTCAAGCTCTCGCTGAGTTCCTG
GCTAGAGGCCACAGCCAATGGACTGGTGGGCGAGGCCAAATTGGGGGTTCAAGTGACCCAGCCAGCCGTGCTGCGCCTGA
TTCCAACCCGCCTCCTGGAGAGCACAGGGGAATCGCTGCTCAACGGGATCCTGCTCACCATCAAAGGCCGCGTTGGCCAG
CAGCTCATTCAAGATTTCCAGAGCTGGCGCCAGCAGGTGAGCCGCCCTTCAGTTCTGGCGCCAGAAAACTAA

Upstream 100 bases:

>100_bases
TGTTCGCCGTAGGTACCCGCCGGCCCTAAAAAGGCCATAGAAGTCAACATCGCAGGACGGGACCAGGACACACCGATAGG
ATCCCACCGCGTCCAGGTCA

Downstream 100 bases:

>100_bases
GCCGGTGCAAGGGGGTGGGCCCCCACTGCAGCAGCGCCGTGCGGTGCGCTTTGGTGCCATAGCCCTTATGCGAGGCCAGC
CCGTAGCCAGGCCAGCGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MGMVLAFRATQSLNLAVRQGADDLPAYLQEQQRVVGALLSPEQLEPLGEGRYRYSVSPLQLFQLRIMPTVEIQVEQQASR
LEMRSLQCNLDGVPGLDDDFKLSLSSWLEATANGLVGEAKLGVQVTQPAVLRLIPTRLLESTGESLLNGILLTIKGRVGQ
QLIQDFQSWRQQVSRPSVLAPEN

Sequences:

>Translated_183_residues
MGMVLAFRATQSLNLAVRQGADDLPAYLQEQQRVVGALLSPEQLEPLGEGRYRYSVSPLQLFQLRIMPTVEIQVEQQASR
LEMRSLQCNLDGVPGLDDDFKLSLSSWLEATANGLVGEAKLGVQVTQPAVLRLIPTRLLESTGESLLNGILLTIKGRVGQ
QLIQDFQSWRQQVSRPSVLAPEN
>Mature_182_residues
GMVLAFRATQSLNLAVRQGADDLPAYLQEQQRVVGALLSPEQLEPLGEGRYRYSVSPLQLFQLRIMPTVEIQVEQQASRL
EMRSLQCNLDGVPGLDDDFKLSLSSWLEATANGLVGEAKLGVQVTQPAVLRLIPTRLLESTGESLLNGILLTIKGRVGQQ
LIQDFQSWRQQVSRPSVLAPEN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018971 [H]

Pfam domain/function: PF09366 DUF1997 [H]

EC number: NA

Molecular weight: Translated: 20224; Mature: 20092

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMVLAFRATQSLNLAVRQGADDLPAYLQEQQRVVGALLSPEQLEPLGEGRYRYSVSPLQ
CCEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEECCHHH
LFQLRIMPTVEIQVEQQASRLEMRSLQCNLDGVPGLDDDFKLSLSSWLEATANGLVGEAK
HHHHHCCCEEEEEEHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
LGVQVTQPAVLRLIPTRLLESTGESLLNGILLTIKGRVGQQLIQDFQSWRQQVSRPSVLA
CCEEECCHHHHHHHHHHHHHHHHHHHHHCEEEEEECHHHHHHHHHHHHHHHHHCCCCCCC
PEN
CCC
>Mature Secondary Structure 
GMVLAFRATQSLNLAVRQGADDLPAYLQEQQRVVGALLSPEQLEPLGEGRYRYSVSPLQ
CEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEECCHHH
LFQLRIMPTVEIQVEQQASRLEMRSLQCNLDGVPGLDDDFKLSLSSWLEATANGLVGEAK
HHHHHCCCEEEEEEHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
LGVQVTQPAVLRLIPTRLLESTGESLLNGILLTIKGRVGQQLIQDFQSWRQQVSRPSVLA
CCEEECCHHHHHHHHHHHHHHHHHHHHHCEEEEEECHHHHHHHHHHHHHHHHHCCCCCCC
PEN
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1551590 [H]