| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
Click here to switch to the map view.
The map label for this gene is fusA [H]
Identifier: 148243268
GI number: 148243268
Start: 1877732
End: 1879807
Strand: Direct
Name: fusA [H]
Synonym: SynRCC307_2169
Alternate gene names: 148243268
Gene position: 1877732-1879807 (Clockwise)
Preceding gene: 148243267
Following gene: 148243269
Centisome position: 84.4
GC content: 56.74
Gene sequence:
>2076_bases GTGCCTCGCGACTTCCCCCTCGATCGCGTCAGGAATATCGGCATTGCCGCTCATATCGACGCTGGCAAAACCACGACCAC GGAACGCATCCTGTTTTATTCAGGCGTGGTGCACAAGATTGGCGAGGTCCACGATGGCGCCGCCGTGACTGACTGGATGG CCCAGGAGCGCGAGCGCGGCATCACCATTACGGCTGCGGCTATTTCCACTGCGTGGAATGACCACCGCATCAACATCATT GATACCCCCGGTCACGTGGACTTCACCATTGAGGTGGAGCGTTCCATGCGTGTGCTCGATGGCGTGATTGCCGTCTTCTG CGCCGTGGGTGGTGTTCAACCTCAGTCGGAAACTGTTTGGCGTCAGGCGGATCGTTACAGCGTTCCCCGCATGGTGTTCG TCAACAAGATGGATCGAACCGGGGCTGACTTCCTCAAGGTCTATGGACAAATCGTTGATCGCCTGAAAGCAAAAGCTGCC CCCATTCAGCTTCCGATTGGCGCCGAAGGTGACCTGAGCGGAATTATCGATTTGGTGGCCAACAAGGCCTATATCTATAA GAACGATCTGGGCACAGATATCGAAGAAGCTGAGATTCCTGCCGACATGGCAGACGAAGCAGCTGAATGGCGGGCAAAGC TCATGGAAAGTGTTGCCGAAAACGACGAAGAACTGATTGAAAAGTTCCTCGAAACCGGTGAACTTACAGAAGCTGAACTC AAAAAAGGCATCCGTGACGGCGTGTTGAAGCACGGCCTTGTTCCGATGCTCTGCGGTTCTGCTTTCAAGAACAAAGGTGT GCAGCTGGTGCTCGACGCTGTGGTCGATTACCTGCCCGCTCCCATCGATGTGCCCCCGATCCAGGGTGTGTTGGCCGATG GCAGCGAAGCCGTTCGTCCTTCTGACGACAATGCTCCCTTTAGTGCACTGGCCTTCAAGGTCATGGCTGACCCCTACGGA AAGCTCACCTTCGTGCGGATGTATTCCGGCGTGCTCTCCAAGGGCAGCTACGTGATGAATTCGACCAAGGACGTCAAAGA GCGCATCTCCCGTCTGGTGGTGCTGAAGGCTGACGATCGCGAGGAGGTGGACCAACTGCGCGCTGGTGACCTGGGCGCGG TGCTGGGCCTGAAGAACACCACCACCGGTGACACCCTCTGCGATCCCGACAACAGCATCGTTCTGGAGACCCTGTTCATT CCCGAACCGGTGATCTCCGTGGCTGTGGAGCCCAAGACCAAGGGCGACATGGAGAAGCTCTCCAAAGCGCTGACGTCCCT ATCCGAGGAAGACCCCACCTTCCGCGTCTCCACCGATGAGGAAACCGGCCAAACCGTAATCGCCGGCATGGGCGAGCTTC ACCTTGAAATCCTGGTGGACCGCATGCTGCGGGAGTTCAAGGTGGAAGCCAACATCGGCGCCCCGCAGGTGTCGTATCGC GAAACCATCCGCTCCTCCTCCAAAGGGGAAGGCAAGTTCGCTCGCCAAACCGGTGGTAAGGGTCAATACGGCCACGTGGT GATCGAAATGGAGCCTGGTGAGCCCGGCACCGGCTTCGAATTCATCAACAAAATTGTTGGTGGCGCCGTTCCCAAGGAAT TCATCAAGCCCGCTGAAATGGGCATGAAGGAAACCTGCGAATCTGGCGTGATTGCCGGTTTCCCGTTGATCGACGTGAAA TGCACAATGGTCGACGGTTCTTATCACGACGTCGACTCTTCGGAGATGGCGTTCAAGATCGCCGGCTCCATGGCCTTCAA AGACGGCGTCAAGAAGTGCAATCCCGTACTGCTTGAACCGATGATGAAGGTGGAAGTCGAGGTGCCCGAGGATTTCCTCG GTTCCATCATCGGCGATCTCTCCTCCCGGAGAGGCCAAGTCGAGGGTCAGTCCATCGACGATGGCATCTCAAAGGTCTCT GCAAAAGTGCCTCTGGCCGAGATGTTCGGCTACGCCACGCAGCTCCGCTCCATGACCCAGGGGAGGGGTATATTTTCAAT GGAATTCAGCCGTTACGAGGAGGTTCCTCGCAACGTGGCCGAAGCCATTATTTCCAAGAATCAGGGAAATTCCTGA
Upstream 100 bases:
>100_bases GCTACTAATCCAAACCTCCCTTTTGCGGGTCAACGGCTGCCTGAGGTCAGCCTGTAGAGTTGCGCCCGCTTTTTAGCAAC ATTCCCCTTAGGAGCATCAC
Downstream 100 bases:
>100_bases TCCTTCCCCCCTCTTCATTTACCCCCCGATTCTTCATTAACAATGGCCCGCGAGAAGTTTGAGAGGAACAAACCTCACGT CAACATCGGCACCATCGGCC
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 691; Mature: 690
Protein sequence:
>691_residues MPRDFPLDRVRNIGIAAHIDAGKTTTTERILFYSGVVHKIGEVHDGAAVTDWMAQERERGITITAAAISTAWNDHRINII DTPGHVDFTIEVERSMRVLDGVIAVFCAVGGVQPQSETVWRQADRYSVPRMVFVNKMDRTGADFLKVYGQIVDRLKAKAA PIQLPIGAEGDLSGIIDLVANKAYIYKNDLGTDIEEAEIPADMADEAAEWRAKLMESVAENDEELIEKFLETGELTEAEL KKGIRDGVLKHGLVPMLCGSAFKNKGVQLVLDAVVDYLPAPIDVPPIQGVLADGSEAVRPSDDNAPFSALAFKVMADPYG KLTFVRMYSGVLSKGSYVMNSTKDVKERISRLVVLKADDREEVDQLRAGDLGAVLGLKNTTTGDTLCDPDNSIVLETLFI PEPVISVAVEPKTKGDMEKLSKALTSLSEEDPTFRVSTDEETGQTVIAGMGELHLEILVDRMLREFKVEANIGAPQVSYR ETIRSSSKGEGKFARQTGGKGQYGHVVIEMEPGEPGTGFEFINKIVGGAVPKEFIKPAEMGMKETCESGVIAGFPLIDVK CTMVDGSYHDVDSSEMAFKIAGSMAFKDGVKKCNPVLLEPMMKVEVEVPEDFLGSIIGDLSSRRGQVEGQSIDDGISKVS AKVPLAEMFGYATQLRSMTQGRGIFSMEFSRYEEVPRNVAEAIISKNQGNS
Sequences:
>Translated_691_residues MPRDFPLDRVRNIGIAAHIDAGKTTTTERILFYSGVVHKIGEVHDGAAVTDWMAQERERGITITAAAISTAWNDHRINII DTPGHVDFTIEVERSMRVLDGVIAVFCAVGGVQPQSETVWRQADRYSVPRMVFVNKMDRTGADFLKVYGQIVDRLKAKAA PIQLPIGAEGDLSGIIDLVANKAYIYKNDLGTDIEEAEIPADMADEAAEWRAKLMESVAENDEELIEKFLETGELTEAEL KKGIRDGVLKHGLVPMLCGSAFKNKGVQLVLDAVVDYLPAPIDVPPIQGVLADGSEAVRPSDDNAPFSALAFKVMADPYG KLTFVRMYSGVLSKGSYVMNSTKDVKERISRLVVLKADDREEVDQLRAGDLGAVLGLKNTTTGDTLCDPDNSIVLETLFI PEPVISVAVEPKTKGDMEKLSKALTSLSEEDPTFRVSTDEETGQTVIAGMGELHLEILVDRMLREFKVEANIGAPQVSYR ETIRSSSKGEGKFARQTGGKGQYGHVVIEMEPGEPGTGFEFINKIVGGAVPKEFIKPAEMGMKETCESGVIAGFPLIDVK CTMVDGSYHDVDSSEMAFKIAGSMAFKDGVKKCNPVLLEPMMKVEVEVPEDFLGSIIGDLSSRRGQVEGQSIDDGISKVS AKVPLAEMFGYATQLRSMTQGRGIFSMEFSRYEEVPRNVAEAIISKNQGNS >Mature_690_residues PRDFPLDRVRNIGIAAHIDAGKTTTTERILFYSGVVHKIGEVHDGAAVTDWMAQERERGITITAAAISTAWNDHRINIID TPGHVDFTIEVERSMRVLDGVIAVFCAVGGVQPQSETVWRQADRYSVPRMVFVNKMDRTGADFLKVYGQIVDRLKAKAAP IQLPIGAEGDLSGIIDLVANKAYIYKNDLGTDIEEAEIPADMADEAAEWRAKLMESVAENDEELIEKFLETGELTEAELK KGIRDGVLKHGLVPMLCGSAFKNKGVQLVLDAVVDYLPAPIDVPPIQGVLADGSEAVRPSDDNAPFSALAFKVMADPYGK LTFVRMYSGVLSKGSYVMNSTKDVKERISRLVVLKADDREEVDQLRAGDLGAVLGLKNTTTGDTLCDPDNSIVLETLFIP EPVISVAVEPKTKGDMEKLSKALTSLSEEDPTFRVSTDEETGQTVIAGMGELHLEILVDRMLREFKVEANIGAPQVSYRE TIRSSSKGEGKFARQTGGKGQYGHVVIEMEPGEPGTGFEFINKIVGGAVPKEFIKPAEMGMKETCESGVIAGFPLIDVKC TMVDGSYHDVDSSEMAFKIAGSMAFKDGVKKCNPVLLEPMMKVEVEVPEDFLGSIIGDLSSRRGQVEGQSIDDGISKVSA KVPLAEMFGYATQLRSMTQGRGIFSMEFSRYEEVPRNVAEAIISKNQGNS
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=694, Percent_Identity=43.8040345821326, Blast_Score=578, Evalue=1e-165, Organism=Homo sapiens, GI19923640, Length=728, Percent_Identity=39.6978021978022, Blast_Score=474, Evalue=1e-133, Organism=Homo sapiens, GI25306287, Length=727, Percent_Identity=37.6891334250344, Blast_Score=435, Evalue=1e-122, Organism=Homo sapiens, GI25306283, Length=443, Percent_Identity=43.3408577878104, Blast_Score=318, Evalue=1e-86, Organism=Homo sapiens, GI157426893, Length=151, Percent_Identity=37.7483443708609, Blast_Score=102, Evalue=2e-21, Organism=Homo sapiens, GI4503483, Length=496, Percent_Identity=26.008064516129, Blast_Score=97, Evalue=6e-20, Organism=Homo sapiens, GI94966754, Length=134, Percent_Identity=38.8059701492537, Blast_Score=94, Evalue=5e-19, Organism=Homo sapiens, GI310132016, Length=118, Percent_Identity=38.9830508474576, Blast_Score=77, Evalue=6e-14, Organism=Homo sapiens, GI310110807, Length=118, Percent_Identity=38.9830508474576, Blast_Score=77, Evalue=6e-14, Organism=Homo sapiens, GI310123363, Length=118, Percent_Identity=38.9830508474576, Blast_Score=77, Evalue=6e-14, Organism=Escherichia coli, GI1789738, Length=699, Percent_Identity=60.9442060085837, Blast_Score=869, Evalue=0.0, Organism=Escherichia coli, GI1790835, Length=477, Percent_Identity=28.7211740041929, Blast_Score=174, Evalue=1e-44, Organism=Escherichia coli, GI48994988, Length=175, Percent_Identity=41.1428571428571, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI1788922, Length=152, Percent_Identity=36.1842105263158, Blast_Score=86, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17533571, Length=679, Percent_Identity=43.0044182621502, Blast_Score=537, Evalue=1e-153, Organism=Caenorhabditis elegans, GI17556745, Length=699, Percent_Identity=28.6123032904149, Blast_Score=283, Evalue=2e-76, Organism=Caenorhabditis elegans, GI17506493, Length=492, Percent_Identity=26.8292682926829, Blast_Score=110, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17557151, Length=148, Percent_Identity=38.5135135135135, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI71988819, Length=134, Percent_Identity=30.5970149253731, Blast_Score=76, Evalue=7e-14, Organism=Caenorhabditis elegans, GI71988811, Length=134, Percent_Identity=30.5970149253731, Blast_Score=75, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17552882, Length=135, Percent_Identity=34.0740740740741, Blast_Score=72, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6323098, Length=691, Percent_Identity=42.1128798842258, Blast_Score=551, Evalue=1e-157, Organism=Saccharomyces cerevisiae, GI6322359, Length=798, Percent_Identity=32.7067669172932, Blast_Score=401, Evalue=1e-112, Organism=Saccharomyces cerevisiae, GI6324707, Length=148, Percent_Identity=40.5405405405405, Blast_Score=96, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6320593, Length=148, Percent_Identity=40.5405405405405, Blast_Score=96, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6323320, Length=157, Percent_Identity=36.3057324840764, Blast_Score=91, Evalue=5e-19, Organism=Saccharomyces cerevisiae, GI6324166, Length=144, Percent_Identity=32.6388888888889, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24582462, Length=694, Percent_Identity=44.5244956772334, Blast_Score=599, Evalue=1e-171, Organism=Drosophila melanogaster, GI221458488, Length=725, Percent_Identity=32.9655172413793, Blast_Score=360, Evalue=3e-99, Organism=Drosophila melanogaster, GI24585711, Length=487, Percent_Identity=25.4620123203285, Blast_Score=105, Evalue=1e-22, Organism=Drosophila melanogaster, GI24585713, Length=487, Percent_Identity=25.4620123203285, Blast_Score=105, Evalue=1e-22, Organism=Drosophila melanogaster, GI24585709, Length=487, Percent_Identity=25.4620123203285, Blast_Score=105, Evalue=1e-22, Organism=Drosophila melanogaster, GI78706572, Length=149, Percent_Identity=38.255033557047, Blast_Score=97, Evalue=3e-20, Organism=Drosophila melanogaster, GI28574573, Length=140, Percent_Identity=36.4285714285714, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI21357743, Length=135, Percent_Identity=31.1111111111111, Blast_Score=70, Evalue=6e-12,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 75273; Mature: 75142
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRDFPLDRVRNIGIAAHIDAGKTTTTERILFYSGVVHKIGEVHDGAAVTDWMAQERERG CCCCCCHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC ITITAAAISTAWNDHRINIIDTPGHVDFTIEVERSMRVLDGVIAVFCAVGGVQPQSETVW EEEEEEHHHHCCCCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHH RQADRYSVPRMVFVNKMDRTGADFLKVYGQIVDRLKAKAAPIQLPIGAEGDLSGIIDLVA HHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHH NKAYIYKNDLGTDIEEAEIPADMADEAAEWRAKLMESVAENDEELIEKFLETGELTEAEL CCEEEEECCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHH KKGIRDGVLKHGLVPMLCGSAFKNKGVQLVLDAVVDYLPAPIDVPPIQGVLADGSEAVRP HHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCC SDDNAPFSALAFKVMADPYGKLTFVRMYSGVLSKGSYVMNSTKDVKERISRLVVLKADDR CCCCCCHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCEEECCHHHHHHHHHHEEEEECCCH EEVDQLRAGDLGAVLGLKNTTTGDTLCDPDNSIVLETLFIPEPVISVAVEPKTKGDMEKL HHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCHHEEEECCCCCCCHHHH SKALTSLSEEDPTFRVSTDEETGQTVIAGMGELHLEILVDRMLREFKVEANIGAPQVSYR HHHHHHCCCCCCCEEEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH ETIRSSSKGEGKFARQTGGKGQYGHVVIEMEPGEPGTGFEFINKIVGGAVPKEFIKPAEM HHHHCCCCCCCCHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCHHHCCHHHC GMKETCESGVIAGFPLIDVKCTMVDGSYHDVDSSEMAFKIAGSMAFKDGVKKCNPVLLEP CHHHHHCCCCEECCCEEEEEEEEECCCCCCCCCCHHEEEHHHHHHHHHHHHHCCHHHHCC MMKVEVEVPEDFLGSIIGDLSSRRGQVEGQSIDDGISKVSAKVPLAEMFGYATQLRSMTQ HHEEEEECCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH GRGIFSMEFSRYEEVPRNVAEAIISKNQGNS CCCEEEEHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PRDFPLDRVRNIGIAAHIDAGKTTTTERILFYSGVVHKIGEVHDGAAVTDWMAQERERG CCCCCHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC ITITAAAISTAWNDHRINIIDTPGHVDFTIEVERSMRVLDGVIAVFCAVGGVQPQSETVW EEEEEEHHHHCCCCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHH RQADRYSVPRMVFVNKMDRTGADFLKVYGQIVDRLKAKAAPIQLPIGAEGDLSGIIDLVA HHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHH NKAYIYKNDLGTDIEEAEIPADMADEAAEWRAKLMESVAENDEELIEKFLETGELTEAEL CCEEEEECCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHH KKGIRDGVLKHGLVPMLCGSAFKNKGVQLVLDAVVDYLPAPIDVPPIQGVLADGSEAVRP HHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCC SDDNAPFSALAFKVMADPYGKLTFVRMYSGVLSKGSYVMNSTKDVKERISRLVVLKADDR CCCCCCHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCEEECCHHHHHHHHHHEEEEECCCH EEVDQLRAGDLGAVLGLKNTTTGDTLCDPDNSIVLETLFIPEPVISVAVEPKTKGDMEKL HHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCHHEEEECCCCCCCHHHH SKALTSLSEEDPTFRVSTDEETGQTVIAGMGELHLEILVDRMLREFKVEANIGAPQVSYR HHHHHHCCCCCCCEEEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH ETIRSSSKGEGKFARQTGGKGQYGHVVIEMEPGEPGTGFEFINKIVGGAVPKEFIKPAEM HHHHCCCCCCCCHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCHHHCCHHHC GMKETCESGVIAGFPLIDVKCTMVDGSYHDVDSSEMAFKIAGSMAFKDGVKKCNPVLLEP CHHHHHCCCCEECCCEEEEEEEEECCCCCCCCCCHHEEEHHHHHHHHHHHHHCCHHHHCC MMKVEVEVPEDFLGSIIGDLSSRRGQVEGQSIDDGISKVSAKVPLAEMFGYATQLRSMTQ HHEEEEECCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH GRGIFSMEFSRYEEVPRNVAEAIISKNQGNS CCCEEEEHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA