| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148243199
Identifier: 148243199
GI number: 148243199
Start: 1816757
End: 1817137
Strand: Direct
Name: 148243199
Synonym: SynRCC307_2100
Alternate gene names: NA
Gene position: 1816757-1817137 (Clockwise)
Preceding gene: 148243198
Following gene: 148243203
Centisome position: 81.66
GC content: 63.52
Gene sequence:
>381_bases ATGCCCACCATGCGTTTTCTGCCCGTTCTGCTCACCCCGGCGCTGTGGCTTCCAGCCCAGGCCATGGCCATGCCTCAAGA AGCCGCCGTTGATTTAGCCCTTGGCTATTGCCTGCATTCCGAGGGACGGGCCACCCAAATGCAGTCCTACCGCTTTGTGC AGGCGTTGGGTGCCAAGCAGGGTTGGCCCAGTGGTTGGTACCAACAGATTCGTCCCAATCAAATCCAAGCCGCCATCAAC AACGCCGGTGGCTGCGGCCGGTTGCTGCAGCGCGCCTCTGGCGGGCAGCCGCTGCAACGGCAACCCCAGGTGGTGCAGCG GGCTCCACAACCTGGTTCACGCAGTGCCGCCGAAGGCTTTGGCCTGGCGCCCTATCGCTAA
Upstream 100 bases:
>100_bases CTCGCGCCGGCTCTCCGAGCTGGAGGCGCGTTACACCGCCAAGCTCAACCCGGACCAGGTGTTGAGCCTCTTCCAGCGTT ACTGCGGTTGACCTCGATCC
Downstream 100 bases:
>100_bases ACGCTGGCCTGCGCTGAGTGGTTGAAAAAGCGGCGGTAATCCGGATCGCGCTCCAACAGATCCAAAAAGCGGTCACGGTC GAGCCTGAGCAAAAGACCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MPTMRFLPVLLTPALWLPAQAMAMPQEAAVDLALGYCLHSEGRATQMQSYRFVQALGAKQGWPSGWYQQIRPNQIQAAIN NAGGCGRLLQRASGGQPLQRQPQVVQRAPQPGSRSAAEGFGLAPYR
Sequences:
>Translated_126_residues MPTMRFLPVLLTPALWLPAQAMAMPQEAAVDLALGYCLHSEGRATQMQSYRFVQALGAKQGWPSGWYQQIRPNQIQAAIN NAGGCGRLLQRASGGQPLQRQPQVVQRAPQPGSRSAAEGFGLAPYR >Mature_125_residues PTMRFLPVLLTPALWLPAQAMAMPQEAAVDLALGYCLHSEGRATQMQSYRFVQALGAKQGWPSGWYQQIRPNQIQAAINN AGGCGRLLQRASGGQPLQRQPQVVQRAPQPGSRSAAEGFGLAPYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13702; Mature: 13571
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTMRFLPVLLTPALWLPAQAMAMPQEAAVDLALGYCLHSEGRATQMQSYRFVQALGAKQ CCCHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC GWPSGWYQQIRPNQIQAAINNAGGCGRLLQRASGGQPLQRQPQVVQRAPQPGSRSAAEGF CCCCHHHHHCCCHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCC GLAPYR CCCCCC >Mature Secondary Structure PTMRFLPVLLTPALWLPAQAMAMPQEAAVDLALGYCLHSEGRATQMQSYRFVQALGAKQ CCHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC GWPSGWYQQIRPNQIQAAINNAGGCGRLLQRASGGQPLQRQPQVVQRAPQPGSRSAAEGF CCCCHHHHHCCCHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCC GLAPYR CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA