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The map label for this gene is pex

Identifier: 148243179

GI number: 148243179

Start: 1797188

End: 1797607

Strand: Direct

Name: pex

Synonym: SynRCC307_2080

Alternate gene names: NA

Gene position: 1797188-1797607 (Clockwise)

Preceding gene: 148243177

Following gene: 148243180

Centisome position: 80.78

GC content: 63.33

Gene sequence:

>420_bases
ATGTCGCACCGGCGAGCCCAAGCCAACCATGGCTTGAATGACATCAAACGCTTCTTTGATCAGCCCCCGCTCCAGTACCT
CGGACTGGAACTGGCCGTCTGCTGGATCCTCGACTGCCTGCTGGCAGCCGATTCCTATCCAACAGCCCTGATGAATCTGC
TGGCCGAGCGCCATCCGCGCCTGCGTCTGTCGGAAACCGTGCTGCAGCAAGCGATTGCCTTCCTTGACCAGCAAGGCGCC
ATTGGCAGCTACTCCCAGCGCTGCCCCAGCCGCGGTCGCCCCCGCCGCATGCTGCACCTGGAGGAGTCCTACCGGGCCGA
AGCTGAAGAGCTCATGCCCGCCTGGCATCGCTGGCTGAAGGACACCGAGTCCACCTCGGCTGCTCCCCAGAAGGTCACAG
CAGAAGTGCTGAGCCGTTGA

Upstream 100 bases:

>100_bases
GCAAATCAGCCCCAATCTGCCCGATGACTCGGCTATCTCACTTGAAAATCAAAACGAGACTGGGTTAGTGCTCGTTCAGA
GCAAAACCACACGATCGGCC

Downstream 100 bases:

>100_bases
GAATGGCGGGGCTCAAAGCCCCGCAATGGATCCTGTTCTCAGCTCCACGCTGCTGCTCACCTCGCTGATGGGCATTGGCC
TGGGTTTCTTTCTCAGGGCC

Product: period-extender protein

Products: NA

Alternate protein names: Circadian Period Extender Pex; Period-Extender Protein; PadR Family Transcriptional Regulator; Circadian Period Extender Gene; Period-Extender; Transcriptional Regulator PadR Family; PadR-Like Family Transcriptional Regulator; Transcriptional Regulator PadR-Like Family; Transcriptional Regulator PadR Family Protein; Circadian Period Extender

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MSHRRAQANHGLNDIKRFFDQPPLQYLGLELAVCWILDCLLAADSYPTALMNLLAERHPRLRLSETVLQQAIAFLDQQGA
IGSYSQRCPSRGRPRRMLHLEESYRAEAEELMPAWHRWLKDTESTSAAPQKVTAEVLSR

Sequences:

>Translated_139_residues
MSHRRAQANHGLNDIKRFFDQPPLQYLGLELAVCWILDCLLAADSYPTALMNLLAERHPRLRLSETVLQQAIAFLDQQGA
IGSYSQRCPSRGRPRRMLHLEESYRAEAEELMPAWHRWLKDTESTSAAPQKVTAEVLSR
>Mature_138_residues
SHRRAQANHGLNDIKRFFDQPPLQYLGLELAVCWILDCLLAADSYPTALMNLLAERHPRLRLSETVLQQAIAFLDQQGAI
GSYSQRCPSRGRPRRMLHLEESYRAEAEELMPAWHRWLKDTESTSAAPQKVTAEVLSR

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15927; Mature: 15796

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHRRAQANHGLNDIKRFFDQPPLQYLGLELAVCWILDCLLAADSYPTALMNLLAERHPR
CCCCHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
LRLSETVLQQAIAFLDQQGAIGSYSQRCPSRGRPRRMLHLEESYRAEAEELMPAWHRWLK
CHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DTESTSAAPQKVTAEVLSR
HCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
SHRRAQANHGLNDIKRFFDQPPLQYLGLELAVCWILDCLLAADSYPTALMNLLAERHPR
CCCHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
LRLSETVLQQAIAFLDQQGAIGSYSQRCPSRGRPRRMLHLEESYRAEAEELMPAWHRWLK
CHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DTESTSAAPQKVTAEVLSR
HCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA