| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148243177
Identifier: 148243177
GI number: 148243177
Start: 1795207
End: 1796421
Strand: Direct
Name: 148243177
Synonym: SynRCC307_2078
Alternate gene names: NA
Gene position: 1795207-1796421 (Clockwise)
Preceding gene: 148243175
Following gene: 148243179
Centisome position: 80.69
GC content: 68.64
Gene sequence:
>1215_bases ATGCCCACCAATCGCCTGCTGGTGCTGAGCAATGGCCATGGGGAAGACCTCATCGCCCGCCGCATTCTTGAGCCGCTGCA ACGGCTCGAGCCCTGCTTGGCAATCGCTGTGCTGCCCCTGGTGGGGCAGGGCAGCAGCTACCGGCAGCTGGAGGGCATCA GCGCCATAGGGCCTCGGCTCACCTTGCCCAGCGGCGGATTTAGCAACCAAAGCGCAGGGGGCTTGGCGCAAGACCTCAAA GCCGGCCTGCTGGGCAACACCTGGAAGCAGTGGCAAAGCCTGCGGCAGTGGAGCCATCAAGGCGGCCGGATCTTGGCGGT GGGCGACCTGCTCCCCTTGGCCATGGCCTGGGCCAGCGGCTTGCCTTACGGCTTCATCGGCACCCCGAAAAGCGATTACA CCTGGAGTAGCGGACCGGGATCCGCCTGGCCAGCCGACACCTACCACCGCTGCAAAGGCAGCGAATGGGATCCCTGGGAA TGGGCCTTGATGCAAGGCAGCCACTGCCGGCTGGTGATCTGCCGCGACCGGCTGACAGCGCGGGGCCTGCGCCGCCATGG CGTGCGCGCACTGGCCCCTGGCAATCCAATGATGGATGGCTTCCTGCCCCGCTCGATTCCGGCTTCCCTGACAGGCCTTC GGCGCCTGCTGCTGCTGCCCGGCTCACGGGCACCGGAAGCCCGGCGCAACCTGCGGCGCCTGCTCAAAGCGCTGCCACCA TCGAGCGAGCATGTGCTGCTGCTGGCCTGCGGACATCAGCCCGATGACGCCAGCCTGCGGGCCCTGATGGAGCCCCTCGG TTACCAACACACTGAGGTCCCGGCTGGCAGCGATGCCGATGCGGCCTGGAACGGACCCGGCGGCTTGTTGCTGCTCGGCC GCGGCCGCTTTGAAACCTGGGCCCCCTGGGCCGAGCTGGGCCTGGCCTGCGCCGGCACCGCCACCGAACAATTGGTGGGC CTGGGCTGCCCGGCCCTCTCGCTGCCAGGTCAAGGCCCGCAGTTCAAGCGCGGCTTTGCCGAACGCCAAAGCCGCCTGCT TGGCGGGGCCGTGCGGGTGTGCCAGAGCCCCGAGGCGTTGGCCGCTGGGTTGCAGCTCTTGCTCAACGAGCCACAACTGC GCGCAGAACTTGGGCGGATTGGGCGCCGCCGCATGGGGCCAGCCGGCGGCAGCCTCGCCAGCGCCCAAGCGATTCAGCAC CACCTCTTGCCCTAG
Upstream 100 bases:
>100_bases TCGAACTGGGGATAAAGGATTTGCAGTCCTCTGCCTTACCACTTGGCCATGCCGCCGGCCGGGGAGCAAACTCCCGAAAA CGGATCGTATCAGCCGCTCC
Downstream 100 bases:
>100_bases GCCACTCAGGCGCGGTGCTCAAAGATTGAGCCGTATTGGAAGCGGTCGAGATCAGAGAACACGGGAATGCAGAGAAAGCA GCGCTGCGCCAAGCTCCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MPTNRLLVLSNGHGEDLIARRILEPLQRLEPCLAIAVLPLVGQGSSYRQLEGISAIGPRLTLPSGGFSNQSAGGLAQDLK AGLLGNTWKQWQSLRQWSHQGGRILAVGDLLPLAMAWASGLPYGFIGTPKSDYTWSSGPGSAWPADTYHRCKGSEWDPWE WALMQGSHCRLVICRDRLTARGLRRHGVRALAPGNPMMDGFLPRSIPASLTGLRRLLLLPGSRAPEARRNLRRLLKALPP SSEHVLLLACGHQPDDASLRALMEPLGYQHTEVPAGSDADAAWNGPGGLLLLGRGRFETWAPWAELGLACAGTATEQLVG LGCPALSLPGQGPQFKRGFAERQSRLLGGAVRVCQSPEALAAGLQLLLNEPQLRAELGRIGRRRMGPAGGSLASAQAIQH HLLP
Sequences:
>Translated_404_residues MPTNRLLVLSNGHGEDLIARRILEPLQRLEPCLAIAVLPLVGQGSSYRQLEGISAIGPRLTLPSGGFSNQSAGGLAQDLK AGLLGNTWKQWQSLRQWSHQGGRILAVGDLLPLAMAWASGLPYGFIGTPKSDYTWSSGPGSAWPADTYHRCKGSEWDPWE WALMQGSHCRLVICRDRLTARGLRRHGVRALAPGNPMMDGFLPRSIPASLTGLRRLLLLPGSRAPEARRNLRRLLKALPP SSEHVLLLACGHQPDDASLRALMEPLGYQHTEVPAGSDADAAWNGPGGLLLLGRGRFETWAPWAELGLACAGTATEQLVG LGCPALSLPGQGPQFKRGFAERQSRLLGGAVRVCQSPEALAAGLQLLLNEPQLRAELGRIGRRRMGPAGGSLASAQAIQH HLLP >Mature_403_residues PTNRLLVLSNGHGEDLIARRILEPLQRLEPCLAIAVLPLVGQGSSYRQLEGISAIGPRLTLPSGGFSNQSAGGLAQDLKA GLLGNTWKQWQSLRQWSHQGGRILAVGDLLPLAMAWASGLPYGFIGTPKSDYTWSSGPGSAWPADTYHRCKGSEWDPWEW ALMQGSHCRLVICRDRLTARGLRRHGVRALAPGNPMMDGFLPRSIPASLTGLRRLLLLPGSRAPEARRNLRRLLKALPPS SEHVLLLACGHQPDDASLRALMEPLGYQHTEVPAGSDADAAWNGPGGLLLLGRGRFETWAPWAELGLACAGTATEQLVGL GCPALSLPGQGPQFKRGFAERQSRLLGGAVRVCQSPEALAAGLQLLLNEPQLRAELGRIGRRRMGPAGGSLASAQAIQHH LLP
Specific function: Unknown
COG id: COG4370
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43352; Mature: 43220
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTNRLLVLSNGHGEDLIARRILEPLQRLEPCLAIAVLPLVGQGSSYRQLEGISAIGPRL CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHCCCEE TLPSGGFSNQSAGGLAQDLKAGLLGNTWKQWQSLRQWSHQGGRILAVGDLLPLAMAWASG ECCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCC LPYGFIGTPKSDYTWSSGPGSAWPADTYHRCKGSEWDPWEWALMQGSHCRLVICRDRLTA CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHEECCCCEEEEEECCHHHH RGLRRHGVRALAPGNPMMDGFLPRSIPASLTGLRRLLLLPGSRAPEARRNLRRLLKALPP HHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC SSEHVLLLACGHQPDDASLRALMEPLGYQHTEVPAGSDADAAWNGPGGLLLLGRGRFETW CCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC APWAELGLACAGTATEQLVGLGCPALSLPGQGPQFKRGFAERQSRLLGGAVRVCQSPEAL CCHHHHCCHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHH AAGLQLLLNEPQLRAELGRIGRRRMGPAGGSLASAQAIQHHLLP HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure PTNRLLVLSNGHGEDLIARRILEPLQRLEPCLAIAVLPLVGQGSSYRQLEGISAIGPRL CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHCCCEE TLPSGGFSNQSAGGLAQDLKAGLLGNTWKQWQSLRQWSHQGGRILAVGDLLPLAMAWASG ECCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCC LPYGFIGTPKSDYTWSSGPGSAWPADTYHRCKGSEWDPWEWALMQGSHCRLVICRDRLTA CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHEECCCCEEEEEECCHHHH RGLRRHGVRALAPGNPMMDGFLPRSIPASLTGLRRLLLLPGSRAPEARRNLRRLLKALPP HHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC SSEHVLLLACGHQPDDASLRALMEPLGYQHTEVPAGSDADAAWNGPGGLLLLGRGRFETW CCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC APWAELGLACAGTATEQLVGLGCPALSLPGQGPQFKRGFAERQSRLLGGAVRVCQSPEAL CCHHHHCCHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHH AAGLQLLLNEPQLRAELGRIGRRRMGPAGGSLASAQAIQHHLLP HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA