Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148243177

Identifier: 148243177

GI number: 148243177

Start: 1795207

End: 1796421

Strand: Direct

Name: 148243177

Synonym: SynRCC307_2078

Alternate gene names: NA

Gene position: 1795207-1796421 (Clockwise)

Preceding gene: 148243175

Following gene: 148243179

Centisome position: 80.69

GC content: 68.64

Gene sequence:

>1215_bases
ATGCCCACCAATCGCCTGCTGGTGCTGAGCAATGGCCATGGGGAAGACCTCATCGCCCGCCGCATTCTTGAGCCGCTGCA
ACGGCTCGAGCCCTGCTTGGCAATCGCTGTGCTGCCCCTGGTGGGGCAGGGCAGCAGCTACCGGCAGCTGGAGGGCATCA
GCGCCATAGGGCCTCGGCTCACCTTGCCCAGCGGCGGATTTAGCAACCAAAGCGCAGGGGGCTTGGCGCAAGACCTCAAA
GCCGGCCTGCTGGGCAACACCTGGAAGCAGTGGCAAAGCCTGCGGCAGTGGAGCCATCAAGGCGGCCGGATCTTGGCGGT
GGGCGACCTGCTCCCCTTGGCCATGGCCTGGGCCAGCGGCTTGCCTTACGGCTTCATCGGCACCCCGAAAAGCGATTACA
CCTGGAGTAGCGGACCGGGATCCGCCTGGCCAGCCGACACCTACCACCGCTGCAAAGGCAGCGAATGGGATCCCTGGGAA
TGGGCCTTGATGCAAGGCAGCCACTGCCGGCTGGTGATCTGCCGCGACCGGCTGACAGCGCGGGGCCTGCGCCGCCATGG
CGTGCGCGCACTGGCCCCTGGCAATCCAATGATGGATGGCTTCCTGCCCCGCTCGATTCCGGCTTCCCTGACAGGCCTTC
GGCGCCTGCTGCTGCTGCCCGGCTCACGGGCACCGGAAGCCCGGCGCAACCTGCGGCGCCTGCTCAAAGCGCTGCCACCA
TCGAGCGAGCATGTGCTGCTGCTGGCCTGCGGACATCAGCCCGATGACGCCAGCCTGCGGGCCCTGATGGAGCCCCTCGG
TTACCAACACACTGAGGTCCCGGCTGGCAGCGATGCCGATGCGGCCTGGAACGGACCCGGCGGCTTGTTGCTGCTCGGCC
GCGGCCGCTTTGAAACCTGGGCCCCCTGGGCCGAGCTGGGCCTGGCCTGCGCCGGCACCGCCACCGAACAATTGGTGGGC
CTGGGCTGCCCGGCCCTCTCGCTGCCAGGTCAAGGCCCGCAGTTCAAGCGCGGCTTTGCCGAACGCCAAAGCCGCCTGCT
TGGCGGGGCCGTGCGGGTGTGCCAGAGCCCCGAGGCGTTGGCCGCTGGGTTGCAGCTCTTGCTCAACGAGCCACAACTGC
GCGCAGAACTTGGGCGGATTGGGCGCCGCCGCATGGGGCCAGCCGGCGGCAGCCTCGCCAGCGCCCAAGCGATTCAGCAC
CACCTCTTGCCCTAG

Upstream 100 bases:

>100_bases
TCGAACTGGGGATAAAGGATTTGCAGTCCTCTGCCTTACCACTTGGCCATGCCGCCGGCCGGGGAGCAAACTCCCGAAAA
CGGATCGTATCAGCCGCTCC

Downstream 100 bases:

>100_bases
GCCACTCAGGCGCGGTGCTCAAAGATTGAGCCGTATTGGAAGCGGTCGAGATCAGAGAACACGGGAATGCAGAGAAAGCA
GCGCTGCGCCAAGCTCCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 404; Mature: 403

Protein sequence:

>404_residues
MPTNRLLVLSNGHGEDLIARRILEPLQRLEPCLAIAVLPLVGQGSSYRQLEGISAIGPRLTLPSGGFSNQSAGGLAQDLK
AGLLGNTWKQWQSLRQWSHQGGRILAVGDLLPLAMAWASGLPYGFIGTPKSDYTWSSGPGSAWPADTYHRCKGSEWDPWE
WALMQGSHCRLVICRDRLTARGLRRHGVRALAPGNPMMDGFLPRSIPASLTGLRRLLLLPGSRAPEARRNLRRLLKALPP
SSEHVLLLACGHQPDDASLRALMEPLGYQHTEVPAGSDADAAWNGPGGLLLLGRGRFETWAPWAELGLACAGTATEQLVG
LGCPALSLPGQGPQFKRGFAERQSRLLGGAVRVCQSPEALAAGLQLLLNEPQLRAELGRIGRRRMGPAGGSLASAQAIQH
HLLP

Sequences:

>Translated_404_residues
MPTNRLLVLSNGHGEDLIARRILEPLQRLEPCLAIAVLPLVGQGSSYRQLEGISAIGPRLTLPSGGFSNQSAGGLAQDLK
AGLLGNTWKQWQSLRQWSHQGGRILAVGDLLPLAMAWASGLPYGFIGTPKSDYTWSSGPGSAWPADTYHRCKGSEWDPWE
WALMQGSHCRLVICRDRLTARGLRRHGVRALAPGNPMMDGFLPRSIPASLTGLRRLLLLPGSRAPEARRNLRRLLKALPP
SSEHVLLLACGHQPDDASLRALMEPLGYQHTEVPAGSDADAAWNGPGGLLLLGRGRFETWAPWAELGLACAGTATEQLVG
LGCPALSLPGQGPQFKRGFAERQSRLLGGAVRVCQSPEALAAGLQLLLNEPQLRAELGRIGRRRMGPAGGSLASAQAIQH
HLLP
>Mature_403_residues
PTNRLLVLSNGHGEDLIARRILEPLQRLEPCLAIAVLPLVGQGSSYRQLEGISAIGPRLTLPSGGFSNQSAGGLAQDLKA
GLLGNTWKQWQSLRQWSHQGGRILAVGDLLPLAMAWASGLPYGFIGTPKSDYTWSSGPGSAWPADTYHRCKGSEWDPWEW
ALMQGSHCRLVICRDRLTARGLRRHGVRALAPGNPMMDGFLPRSIPASLTGLRRLLLLPGSRAPEARRNLRRLLKALPPS
SEHVLLLACGHQPDDASLRALMEPLGYQHTEVPAGSDADAAWNGPGGLLLLGRGRFETWAPWAELGLACAGTATEQLVGL
GCPALSLPGQGPQFKRGFAERQSRLLGGAVRVCQSPEALAAGLQLLLNEPQLRAELGRIGRRRMGPAGGSLASAQAIQHH
LLP

Specific function: Unknown

COG id: COG4370

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43352; Mature: 43220

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTNRLLVLSNGHGEDLIARRILEPLQRLEPCLAIAVLPLVGQGSSYRQLEGISAIGPRL
CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHCCCEE
TLPSGGFSNQSAGGLAQDLKAGLLGNTWKQWQSLRQWSHQGGRILAVGDLLPLAMAWASG
ECCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCC
LPYGFIGTPKSDYTWSSGPGSAWPADTYHRCKGSEWDPWEWALMQGSHCRLVICRDRLTA
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHEECCCCEEEEEECCHHHH
RGLRRHGVRALAPGNPMMDGFLPRSIPASLTGLRRLLLLPGSRAPEARRNLRRLLKALPP
HHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC
SSEHVLLLACGHQPDDASLRALMEPLGYQHTEVPAGSDADAAWNGPGGLLLLGRGRFETW
CCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
APWAELGLACAGTATEQLVGLGCPALSLPGQGPQFKRGFAERQSRLLGGAVRVCQSPEAL
CCHHHHCCHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHH
AAGLQLLLNEPQLRAELGRIGRRRMGPAGGSLASAQAIQHHLLP
HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
PTNRLLVLSNGHGEDLIARRILEPLQRLEPCLAIAVLPLVGQGSSYRQLEGISAIGPRL
CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHCCCEE
TLPSGGFSNQSAGGLAQDLKAGLLGNTWKQWQSLRQWSHQGGRILAVGDLLPLAMAWASG
ECCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCC
LPYGFIGTPKSDYTWSSGPGSAWPADTYHRCKGSEWDPWEWALMQGSHCRLVICRDRLTA
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHEECCCCEEEEEECCHHHH
RGLRRHGVRALAPGNPMMDGFLPRSIPASLTGLRRLLLLPGSRAPEARRNLRRLLKALPP
HHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC
SSEHVLLLACGHQPDDASLRALMEPLGYQHTEVPAGSDADAAWNGPGGLLLLGRGRFETW
CCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
APWAELGLACAGTATEQLVGLGCPALSLPGQGPQFKRGFAERQSRLLGGAVRVCQSPEAL
CCHHHHCCHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHH
AAGLQLLLNEPQLRAELGRIGRRRMGPAGGSLASAQAIQHHLLP
HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA