Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148243175

Identifier: 148243175

GI number: 148243175

Start: 1794162

End: 1794650

Strand: Direct

Name: 148243175

Synonym: SynRCC307_2076

Alternate gene names: NA

Gene position: 1794162-1794650 (Clockwise)

Preceding gene: 148243174

Following gene: 148243177

Centisome position: 80.64

GC content: 60.94

Gene sequence:

>489_bases
GTGAGAAACCAATGGGCCATCGCCATGGCGCTGATGGCAAGCCTGCTCGGCCAACCCGCCGCCGCCCAAGGGGACGGTCA
ATTGGTACTGGAACCCAAGAGCTGCCAGCGCAGCCGCATGATGAACAAGCTCAAGCGGCAACCCAACCAAGGCCCTTGTG
CCCGAGTTGTGCTTGAGCAGGTCGATGGCAACTACATCACCGTCTCCTTTTTGGCGCGAGGCAGCGAGCGAGGCAGCAGC
AACAGCCTCAGCCTGGGGGGAACCACCACCACACCCTTGAGCTGCCGGCTGAACAAGTGCCGGCTAAGCCAACCGTTGCA
GCTGGAGCTCGATAACGCCAAAGAGGTGGCGTATGACAGCGAAGGAATTGAGAGTTCTCTGCCCAGTGCCTGGCCGGCCG
TGGGGAGCTGTCAGCTCAGTCCGGAGGCCATCAGCTGCTCAGCACGCTCGATGTTTAAGGCCGAATGGCAGGCCGAAGCG
AGTTTTTAA

Upstream 100 bases:

>100_bases
CTGCGGACGCACGGCCAACAACGGCCTGAGCTGCATTGGGATGTGCGTCGCTGACAACGAGTACTGAGGTGGCCACAATG
CAGCACCTGTCCAGGGTGTT

Downstream 100 bases:

>100_bases
AACCGCCCTACTGCTGGGAAAGACCCTCGCCATACCAGGCTTCGCCAAGCTGCCAGCGCACCAGCGGGCCATCGGAGCTG
GCCACCACTTTGAGATTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MRNQWAIAMALMASLLGQPAAAQGDGQLVLEPKSCQRSRMMNKLKRQPNQGPCARVVLEQVDGNYITVSFLARGSERGSS
NSLSLGGTTTTPLSCRLNKCRLSQPLQLELDNAKEVAYDSEGIESSLPSAWPAVGSCQLSPEAISCSARSMFKAEWQAEA
SF

Sequences:

>Translated_162_residues
MRNQWAIAMALMASLLGQPAAAQGDGQLVLEPKSCQRSRMMNKLKRQPNQGPCARVVLEQVDGNYITVSFLARGSERGSS
NSLSLGGTTTTPLSCRLNKCRLSQPLQLELDNAKEVAYDSEGIESSLPSAWPAVGSCQLSPEAISCSARSMFKAEWQAEA
SF
>Mature_162_residues
MRNQWAIAMALMASLLGQPAAAQGDGQLVLEPKSCQRSRMMNKLKRQPNQGPCARVVLEQVDGNYITVSFLARGSERGSS
NSLSLGGTTTTPLSCRLNKCRLSQPLQLELDNAKEVAYDSEGIESSLPSAWPAVGSCQLSPEAISCSARSMFKAEWQAEA
SF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17468; Mature: 17468

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNQWAIAMALMASLLGQPAAAQGDGQLVLEPKSCQRSRMMNKLKRQPNQGPCARVVLEQ
CCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
VDGNYITVSFLARGSERGSSNSLSLGGTTTTPLSCRLNKCRLSQPLQLELDNAKEVAYDS
CCCCEEEEEEEECCCCCCCCCCEECCCCCCCCCEEECCCCCCCCCEEEEECCCCHHHCCC
EGIESSLPSAWPAVGSCQLSPEAISCSARSMFKAEWQAEASF
CCCHHCCCCCCCCCCCCEECCHHHCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRNQWAIAMALMASLLGQPAAAQGDGQLVLEPKSCQRSRMMNKLKRQPNQGPCARVVLEQ
CCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
VDGNYITVSFLARGSERGSSNSLSLGGTTTTPLSCRLNKCRLSQPLQLELDNAKEVAYDS
CCCCEEEEEEEECCCCCCCCCCEECCCCCCCCCEEECCCCCCCCCEEEEECCCCHHHCCC
EGIESSLPSAWPAVGSCQLSPEAISCSARSMFKAEWQAEASF
CCCHHCCCCCCCCCCCCEECCHHHCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA