Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is pebB

Identifier: 148243161

GI number: 148243161

Start: 1784322

End: 1785110

Strand: Direct

Name: pebB

Synonym: SynRCC307_2062

Alternate gene names: 148243161

Gene position: 1784322-1785110 (Clockwise)

Preceding gene: 148243160

Following gene: 148243162

Centisome position: 80.2

GC content: 60.96

Gene sequence:

>789_bases
ATGACCACGCCTCGCCAGAGCAGCCTTGAGCCACTCAGCATCGCCAACTGGCGGTGGCAACCCTTCTTGGATCACGCCTG
CGGGGCCCTACAGCCACTGGAGCTTGAGCCTTACCCGGTCGCGCCAGAGTTTCTGCTGCAAACCAGCCAAACCGGTTCCA
AGAGCAAACCGGTTCAGGTCACCACAGCCACTTGGGCCTGCAAGACCAACAAGCTTCGTCAAGTGCGGGCGGCCTGCGTG
GAAGCCGGCGCAGCGGCTTCGGTGCTGAATTTTGTGGTCAATCCGAGCACCAGCTACGACCTGCCGTTTTTCGGTGCCGA
CCTGGTGACCCTGCCAGCTGGTCATCTGCTGGCCCTCGACCTTCAGCCAGCCTTGAAAACAGACGCCGAACACACCAAGG
CTGTTTGGGAAAGGCTGATGCCGATTTTCGAGCGCTGGCAACAACGCCTCCCTGGCGGCGGCCCCATCCCCGAAGAAGCG
AAGCCCTACTTTTCTCCTGGTTTCCTGTGGACCCGCATCCCCCTGGGAAGCGAGGGCGATGCCCTGATCGAGGAAGCCGT
CAAGCCGGCCTTCCGCGACTACCTCGAGCTCTACCTCCAATTGGTGCACGAAGCGGAGGAGGTGAGCCCAGAGCGCAGCG
CTGAACTCCTGGCTGGGCAAAAGCGCTACACGAGCTACCGCGCGGAAAAAGATCCCGCCCGCGGCATGTTGACTCGCTTC
CACGGAGCGGAATGGACCGAGGCCTACATCCACGGAGTTCTTTTCGATCTTGATAAGAAGTGGATGTAA

Upstream 100 bases:

>100_bases
GCGCCGAACGTGATCCCGCTCACGGGCTCTTCACCAGCCATTTCGGCAAGGAGTGGTCCGACCGCTTCCTGCATGAATTT
CTGTTCCCAGCGTCTGCTTC

Downstream 100 bases:

>100_bases
AGTGCTCTCACAGGCAAAAAACAAGGCCCTGAAAGGCTTGTCAGTGAAACGTGTGAATTAAACATTGTGAACAGGGTTCC
AGGGTCTGATAACTCATTGG

Product: phycoerythrobilin:ferredoxin oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MTTPRQSSLEPLSIANWRWQPFLDHACGALQPLELEPYPVAPEFLLQTSQTGSKSKPVQVTTATWACKTNKLRQVRAACV
EAGAAASVLNFVVNPSTSYDLPFFGADLVTLPAGHLLALDLQPALKTDAEHTKAVWERLMPIFERWQQRLPGGGPIPEEA
KPYFSPGFLWTRIPLGSEGDALIEEAVKPAFRDYLELYLQLVHEAEEVSPERSAELLAGQKRYTSYRAEKDPARGMLTRF
HGAEWTEAYIHGVLFDLDKKWM

Sequences:

>Translated_262_residues
MTTPRQSSLEPLSIANWRWQPFLDHACGALQPLELEPYPVAPEFLLQTSQTGSKSKPVQVTTATWACKTNKLRQVRAACV
EAGAAASVLNFVVNPSTSYDLPFFGADLVTLPAGHLLALDLQPALKTDAEHTKAVWERLMPIFERWQQRLPGGGPIPEEA
KPYFSPGFLWTRIPLGSEGDALIEEAVKPAFRDYLELYLQLVHEAEEVSPERSAELLAGQKRYTSYRAEKDPARGMLTRF
HGAEWTEAYIHGVLFDLDKKWM
>Mature_261_residues
TTPRQSSLEPLSIANWRWQPFLDHACGALQPLELEPYPVAPEFLLQTSQTGSKSKPVQVTTATWACKTNKLRQVRAACVE
AGAAASVLNFVVNPSTSYDLPFFGADLVTLPAGHLLALDLQPALKTDAEHTKAVWERLMPIFERWQQRLPGGGPIPEEAK
PYFSPGFLWTRIPLGSEGDALIEEAVKPAFRDYLELYLQLVHEAEEVSPERSAELLAGQKRYTSYRAEKDPARGMLTRFH
GAEWTEAYIHGVLFDLDKKWM

Specific function: Catalyzes the two-electron reduction of the C2 and C3(1) diene system of 15,16-dihydrobiliverdin

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HY2 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PEBB_SYNR3 (A5GVQ6)

Other databases:

- EMBL:   CT978603
- RefSeq:   YP_001228318.1
- ProteinModelPortal:   A5GVQ6
- SMR:   A5GVQ6
- STRING:   A5GVQ6
- GeneID:   5157772
- GenomeReviews:   CT978603_GR
- KEGG:   syr:SynRCC307_2062
- eggNOG:   NOG40636
- HOGENOM:   HBG635096
- OMA:   DLPFFGA
- ProtClustDB:   PRK13249
- HAMAP:   MF_00793
- InterPro:   IPR009249
- InterPro:   IPR022827

Pfam domain/function: PF05996 Fe_bilin_red

EC number: =1.3.7.3

Molecular weight: Translated: 29378; Mature: 29247

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPRQSSLEPLSIANWRWQPFLDHACGALQPLELEPYPVAPEFLLQTSQTGSKSKPVQV
CCCCCCCCCCCCEECCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEE
TTATWACKTNKLRQVRAACVEAGAAASVLNFVVNPSTSYDLPFFGADLVTLPAGHLLALD
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCEEEEE
LQPALKTDAEHTKAVWERLMPIFERWQQRLPGGGPIPEEAKPYFSPGFLWTRIPLGSEGD
CCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCH
ALIEEAVKPAFRDYLELYLQLVHEAEEVSPERSAELLAGQKRYTSYRAEKDPARGMLTRF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHH
HGAEWTEAYIHGVLFDLDKKWM
CCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TTPRQSSLEPLSIANWRWQPFLDHACGALQPLELEPYPVAPEFLLQTSQTGSKSKPVQV
CCCCCCCCCCCEECCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEE
TTATWACKTNKLRQVRAACVEAGAAASVLNFVVNPSTSYDLPFFGADLVTLPAGHLLALD
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCEEEEE
LQPALKTDAEHTKAVWERLMPIFERWQQRLPGGGPIPEEAKPYFSPGFLWTRIPLGSEGD
CCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCH
ALIEEAVKPAFRDYLELYLQLVHEAEEVSPERSAELLAGQKRYTSYRAEKDPARGMLTRF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHH
HGAEWTEAYIHGVLFDLDKKWM
CCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA