Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148243146

Identifier: 148243146

GI number: 148243146

Start: 1772548

End: 1773744

Strand: Direct

Name: 148243146

Synonym: SynRCC307_2047

Alternate gene names: NA

Gene position: 1772548-1773744 (Clockwise)

Preceding gene: 148243142

Following gene: 148243147

Centisome position: 79.67

GC content: 52.13

Gene sequence:

>1197_bases
ATGTCAGAAAGATTTGATATTTTATTTCAAGGGCTTGAAGAAGAATCCGCGCTCAAGCTGATTTTGGCCAACCCTGATGA
GTTGGCCAATCCAGTCGATAAATACATGGCAGCAACAAGGCTGGGAGCCAGCCACACGCCTGAATCACTCGATGTACTGA
TCCAAGCAATTGACTTAGACCCCGAAAATTTGTTTAACAGAATTACCCGAAGAAAGGCAGCTGAAGCATTGGGGAGACGC
AAAGACCCCAAAGCTCTTCCGGGTCTGTTCAAAGCATTGAGCTTTGACGATGAAGCAGCCGTCATCAATGCAGTCGACTC
GATCAGCCAAATCAGCGCGGCCCTTGACCAGAAGCAATGCGATCAACTGGTCAGTGCGCTCGCGGGAAGCGACAACATCA
AGCGCGCTGTCATCCAATGCCACACCCGTTTAAGACTGAAATCAGGGTTGGAGGCTGTTAAGAGCCTTCAAAACGATGAA
AACCCCTTGGTTTCTGGGGCAGCTCGGGCCTATGCAGCTCGAGTTTTTGGCGAATGCGAGTCTTTGAAGCCATTGCTGGC
CCAGCTGACAGACCCCATCGCGGGACGACGCAGAGCAGCCGTCATCGACTTGGGAGATGCAGGAGATGCCACAGCGTTGT
CAGCTCTCGCCAAAGCACCGGTCTCCATGCCGCTTAGGGCAAAAAGTGCTTTTCAACTGGTGGATCCTGAAAAAAGCGGG
TCCATTCCAATGGAATTCACTGAAACGATTAGGTCATTACTAATAGATGACCCCCGGAGCCTCTGGCTACAGGACGACTG
GATCTGCGAAGCGAACACCGAAGAGATCGAAAAGAACCTGCAGCACCGCGACGAGGGAAAGCAGTACGGGGGGATCGCCA
GCCTGTTGCAGATGGAACGAGGCCAGCAGCTAGAGGCCATCGAGCTCTTCCATCAGAAACTCTGGAGTGACTATGGGGCT
AATTACCTACTGACCAGCTTGATTGGCTTGGAAAAATTCGACGAGAAGAGCGAATTAGTCCGCACGGCACTTGCAGAAAC
CCTGCCCCAGTACGCCAAGTCGAGAATTGCAGCAGCCTGGGCTTGCCTCAAGCTGGGACTACGCGATCAACTGGGAGTAC
TGACTGAGACCATGGAAACGGCTCGCTGGATACCACTAAAATGGAGCTGCGAGCAGGTACTTAAAGAGTTGTCATAA

Upstream 100 bases:

>100_bases
TGACAAGTGCCTTGATCAATCCAATGCAACATTAACAGCAAAAGCGGCAGTGCTAGGTTAACGGCGGACTAGACAGTCAA
AGCTCCAAAAAACCGTTTCT

Downstream 100 bases:

>100_bases
GAGCCCAAAACCACTGGTGCCACAGAGCTTTTCCTCCCAGTAAGGCAAACAATTTCCAAATCTATTCAGATTTTCAGTTT
GCAAACTTGTGTGTCTTGAT

Product: bilin biosynthesis protein CpeY

Products: NA

Alternate protein names: ORF Y [H]

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MSERFDILFQGLEEESALKLILANPDELANPVDKYMAATRLGASHTPESLDVLIQAIDLDPENLFNRITRRKAAEALGRR
KDPKALPGLFKALSFDDEAAVINAVDSISQISAALDQKQCDQLVSALAGSDNIKRAVIQCHTRLRLKSGLEAVKSLQNDE
NPLVSGAARAYAARVFGECESLKPLLAQLTDPIAGRRRAAVIDLGDAGDATALSALAKAPVSMPLRAKSAFQLVDPEKSG
SIPMEFTETIRSLLIDDPRSLWLQDDWICEANTEEIEKNLQHRDEGKQYGGIASLLQMERGQQLEAIELFHQKLWSDYGA
NYLLTSLIGLEKFDEKSELVRTALAETLPQYAKSRIAAAWACLKLGLRDQLGVLTETMETARWIPLKWSCEQVLKELS

Sequences:

>Translated_398_residues
MSERFDILFQGLEEESALKLILANPDELANPVDKYMAATRLGASHTPESLDVLIQAIDLDPENLFNRITRRKAAEALGRR
KDPKALPGLFKALSFDDEAAVINAVDSISQISAALDQKQCDQLVSALAGSDNIKRAVIQCHTRLRLKSGLEAVKSLQNDE
NPLVSGAARAYAARVFGECESLKPLLAQLTDPIAGRRRAAVIDLGDAGDATALSALAKAPVSMPLRAKSAFQLVDPEKSG
SIPMEFTETIRSLLIDDPRSLWLQDDWICEANTEEIEKNLQHRDEGKQYGGIASLLQMERGQQLEAIELFHQKLWSDYGA
NYLLTSLIGLEKFDEKSELVRTALAETLPQYAKSRIAAAWACLKLGLRDQLGVLTETMETARWIPLKWSCEQVLKELS
>Mature_397_residues
SERFDILFQGLEEESALKLILANPDELANPVDKYMAATRLGASHTPESLDVLIQAIDLDPENLFNRITRRKAAEALGRRK
DPKALPGLFKALSFDDEAAVINAVDSISQISAALDQKQCDQLVSALAGSDNIKRAVIQCHTRLRLKSGLEAVKSLQNDEN
PLVSGAARAYAARVFGECESLKPLLAQLTDPIAGRRRAAVIDLGDAGDATALSALAKAPVSMPLRAKSAFQLVDPEKSGS
IPMEFTETIRSLLIDDPRSLWLQDDWICEANTEEIEKNLQHRDEGKQYGGIASLLQMERGQQLEAIELFHQKLWSDYGAN
YLLTSLIGLEKFDEKSELVRTALAETLPQYAKSRIAAAWACLKLGLRDQLGVLTETMETARWIPLKWSCEQVLKELS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR004155 [H]

Pfam domain/function: PF03130 HEAT_PBS [H]

EC number: NA

Molecular weight: Translated: 43925; Mature: 43793

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERFDILFQGLEEESALKLILANPDELANPVDKYMAATRLGASHTPESLDVLIQAIDLD
CCCHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
PENLFNRITRRKAAEALGRRKDPKALPGLFKALSFDDEAAVINAVDSISQISAALDQKQC
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
DQLVSALAGSDNIKRAVIQCHTRLRLKSGLEAVKSLQNDENPLVSGAARAYAARVFGECE
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
SLKPLLAQLTDPIAGRRRAAVIDLGDAGDATALSALAKAPVSMPLRAKSAFQLVDPEKSG
HHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCHHCHHHEECCCCCC
SIPMEFTETIRSLLIDDPRSLWLQDDWICEANTEEIEKNLQHRDEGKQYGGIASLLQMER
CCCHHHHHHHHHHHHCCCHHHCCCCCEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHC
GQQLEAIELFHQKLWSDYGANYLLTSLIGLEKFDEKSELVRTALAETLPQYAKSRIAAAW
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ACLKLGLRDQLGVLTETMETARWIPLKWSCEQVLKELS
HHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC
>Mature Secondary Structure 
SERFDILFQGLEEESALKLILANPDELANPVDKYMAATRLGASHTPESLDVLIQAIDLD
CCHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
PENLFNRITRRKAAEALGRRKDPKALPGLFKALSFDDEAAVINAVDSISQISAALDQKQC
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
DQLVSALAGSDNIKRAVIQCHTRLRLKSGLEAVKSLQNDENPLVSGAARAYAARVFGECE
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
SLKPLLAQLTDPIAGRRRAAVIDLGDAGDATALSALAKAPVSMPLRAKSAFQLVDPEKSG
HHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCHHCHHHEECCCCCC
SIPMEFTETIRSLLIDDPRSLWLQDDWICEANTEEIEKNLQHRDEGKQYGGIASLLQMER
CCCHHHHHHHHHHHHCCCHHHCCCCCEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHC
GQQLEAIELFHQKLWSDYGANYLLTSLIGLEKFDEKSELVRTALAETLPQYAKSRIAAAW
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ACLKLGLRDQLGVLTETMETARWIPLKWSCEQVLKELS
HHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1809846 [H]