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The map label for this gene is mpeB [H]

Identifier: 148243147

GI number: 148243147

Start: 1773932

End: 1774468

Strand: Direct

Name: mpeB [H]

Synonym: SynRCC307_2048

Alternate gene names: 148243147

Gene position: 1773932-1774468 (Clockwise)

Preceding gene: 148243146

Following gene: 148243148

Centisome position: 79.73

GC content: 61.64

Gene sequence:

>537_bases
ATGCTCGACGCATTCTCCAGGAAGGCCGTCTCGGCCGATTCCAGCGGCGCCTTCATCGGTGGAGGCGAGCTGGCCTCCCT
CAAGTCCTTCATTTCTGAGGGCAACAAGCGTCTCGACGCTGTCAACGCTCTCTCCTCGAACGCTGCTTGCATCGTTTCTG
ATGCTGTCGCAGGTATCTGCTGCGAGAACACAGGCCTGACCGCCCCCAACGGTGGTGTGTACACCAACCGCAAAATGGCT
GCTTGCCTGCGCGACGGTGAGATCGTTCTCCGTTATGTCAGCTACGCCCTGCTGGCCGGCGACGCTTCCGTGCTCCAGGA
TCGCTGCCTGAACGGTCTGCGTGAAACCTATGCCGCCCTGGGCGTTCCCACCGGCTCTGCTTCCCGCGCTGTGGCCATCA
TGAAGGCCGCTGCCGCTGCCCTCATCACCAACACCAACAGCCAGGCCAAGAAAGCCGCTGTGACCCAGGGTGATTGCTCC
AGCCTGTCCGGCGAAGCTTCCAGCTACTTCGACATGGTGATCAGCGCCATCAGCTGA

Upstream 100 bases:

>100_bases
TGTGTGTCTTGATATTCATCTCCAACTCTGAGCTTCAAACAGCAGGGTTAATGTCATCCGTGATGCGGATTGCATCCCCC
AAACCCTTAATCGCTCAACC

Downstream 100 bases:

>100_bases
GCCATATCTCTCTAAACGCCCAAAACCAACTACTTCCAAATCATGAAGTCTGTCATCACCACCGTTATCGGCGCCGCCGA
TAGCGCTTCCCGCTTCCCCT

Product: C-phycoerythrin class II beta chain

Products: NA

Alternate protein names: C-phycoerythrin class II beta chain [H]

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MLDAFSRKAVSADSSGAFIGGGELASLKSFISEGNKRLDAVNALSSNAACIVSDAVAGICCENTGLTAPNGGVYTNRKMA
ACLRDGEIVLRYVSYALLAGDASVLQDRCLNGLRETYAALGVPTGSASRAVAIMKAAAAALITNTNSQAKKAAVTQGDCS
SLSGEASSYFDMVISAIS

Sequences:

>Translated_178_residues
MLDAFSRKAVSADSSGAFIGGGELASLKSFISEGNKRLDAVNALSSNAACIVSDAVAGICCENTGLTAPNGGVYTNRKMA
ACLRDGEIVLRYVSYALLAGDASVLQDRCLNGLRETYAALGVPTGSASRAVAIMKAAAAALITNTNSQAKKAAVTQGDCS
SLSGEASSYFDMVISAIS
>Mature_178_residues
MLDAFSRKAVSADSSGAFIGGGELASLKSFISEGNKRLDAVNALSSNAACIVSDAVAGICCENTGLTAPNGGVYTNRKMA
ACLRDGEIVLRYVSYALLAGDASVLQDRCLNGLRETYAALGVPTGSASRAVAIMKAAAAALITNTNSQAKKAAVTQGDCS
SLSGEASSYFDMVISAIS

Specific function: Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side. Note=Forms the periphery of the phycobilisome rod (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phycobiliprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009050
- InterPro:   IPR012128 [H]

Pfam domain/function: PF00502 Phycobilisome [H]

EC number: NA

Molecular weight: Translated: 18060; Mature: 18060

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDAFSRKAVSADSSGAFIGGGELASLKSFISEGNKRLDAVNALSSNAACIVSDAVAGIC
CCCCCCCHHCCCCCCCCEECCCHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEHHHHHHEE
CENTGLTAPNGGVYTNRKMAACLRDGEIVLRYVSYALLAGDASVLQDRCLNGLRETYAAL
ECCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GVPTGSASRAVAIMKAAAAALITNTNSQAKKAAVTQGDCSSLSGEASSYFDMVISAIS
CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MLDAFSRKAVSADSSGAFIGGGELASLKSFISEGNKRLDAVNALSSNAACIVSDAVAGIC
CCCCCCCHHCCCCCCCCEECCCHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEHHHHHHEE
CENTGLTAPNGGVYTNRKMAACLRDGEIVLRYVSYALLAGDASVLQDRCLNGLRETYAAL
ECCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GVPTGSASRAVAIMKAAAAALITNTNSQAKKAAVTQGDCSSLSGEASSYFDMVISAIS
CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12917641 [H]