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The map label for this gene is cpcG1 [H]

Identifier: 148243124

GI number: 148243124

Start: 1756314

End: 1757072

Strand: Direct

Name: cpcG1 [H]

Synonym: SynRCC307_2025

Alternate gene names: 148243124

Gene position: 1756314-1757072 (Clockwise)

Preceding gene: 148243123

Following gene: 148243125

Centisome position: 78.94

GC content: 61.0

Gene sequence:

>759_bases
GTGGCTATTCCCCTCCTGCCGTACGCGCCCATCACCCAAAACGCCCGGGTGGAGCGGATTCGCGTGGGCTCGGACGAAGA
CCTCAAGGTCGTAGCCCTCGACCAGTCGATGGACGCCGACAACCTCAAGACAGTCATTGAGTCGGCGTATCGCCAGATCT
TTTTCCACGCCTTCAAGAGCGACCGCGATCGCTTCTTGGAATCACAGCTGCGCAACGGTCAGATCACCGTGCGCGATTTC
ATCCGCGGCCTCTGCCTCTCGGACACCTTCACCCGCACCTTCTACGGGTTCAACAGCAACTACAAGGTGGTGCGCCACTT
GGTGGAACGCCTGCTGGGACGCAAGACCAGCGGCAAAGGCGAGGAGCTCTCCTGGTCCATCGTGATCGCCACCAAAGGTG
TTGCCGGCATGGTGGACGCCTTGCTCGATAGCGAGGAGTACCTCGACAACTTCGGTTTCGACACCGTCCCTTACCAGCGC
CATCGCGTGCTGCCCGGGCGCGATCTGGGCGACACCCCCTTCAACATCACCACTCCTCGCTACGACGAGTACCACCGCAA
CAAGCTGGGCTTCCCCCAGATCATCTTCACTGGCGACATCAAGCGGTTGCCCGAGCGCGCCAAGATCAAGCGAGGCGGCA
ATCCAGCCGACTACATGGATTGGGTCGGGAGCATGGGCGCAGTCAACATGCCTGGCTCTCAAGCCCAAACCAGTGGGGAC
TACATGTCACGCGTTCCTTACCGCAGCATCGGCCGCTAA

Upstream 100 bases:

>100_bases
AGCCGTCCGAAAAGTTACGGACTGTGATCGCGATTGAAAAGATTCGGCTCTCTTCCAGCCCCCACTTCTACGATCAGCGT
CGTCGGATGCTGACTACTGA

Downstream 100 bases:

>100_bases
GCGATCGCGTTCAGCACCCTTCAAAGCACTCCGAAAGGGGTGCTTTTTTGTGCCGCTCACGCGTCTGGCCTAGCAAGAAT
CAGGAATTGCTGACGGGTGA

Product: phycobilisome rod-core linker polypeptide CpcG (L-RC 28.5)

Products: NA

Alternate protein names: L-RC 28.5 [H]

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MAIPLLPYAPITQNARVERIRVGSDEDLKVVALDQSMDADNLKTVIESAYRQIFFHAFKSDRDRFLESQLRNGQITVRDF
IRGLCLSDTFTRTFYGFNSNYKVVRHLVERLLGRKTSGKGEELSWSIVIATKGVAGMVDALLDSEEYLDNFGFDTVPYQR
HRVLPGRDLGDTPFNITTPRYDEYHRNKLGFPQIIFTGDIKRLPERAKIKRGGNPADYMDWVGSMGAVNMPGSQAQTSGD
YMSRVPYRSIGR

Sequences:

>Translated_252_residues
MAIPLLPYAPITQNARVERIRVGSDEDLKVVALDQSMDADNLKTVIESAYRQIFFHAFKSDRDRFLESQLRNGQITVRDF
IRGLCLSDTFTRTFYGFNSNYKVVRHLVERLLGRKTSGKGEELSWSIVIATKGVAGMVDALLDSEEYLDNFGFDTVPYQR
HRVLPGRDLGDTPFNITTPRYDEYHRNKLGFPQIIFTGDIKRLPERAKIKRGGNPADYMDWVGSMGAVNMPGSQAQTSGD
YMSRVPYRSIGR
>Mature_251_residues
AIPLLPYAPITQNARVERIRVGSDEDLKVVALDQSMDADNLKTVIESAYRQIFFHAFKSDRDRFLESQLRNGQITVRDFI
RGLCLSDTFTRTFYGFNSNYKVVRHLVERLLGRKTSGKGEELSWSIVIATKGVAGMVDALLDSEEYLDNFGFDTVPYQRH
RVLPGRDLGDTPFNITTPRYDEYHRNKLGFPQIIFTGDIKRLPERAKIKRGGNPADYMDWVGSMGAVNMPGSQAQTSGDY
MSRVPYRSIGR

Specific function: Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PBS-linker domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001297
- InterPro:   IPR016470
- ProDom:   PD000852 [H]

Pfam domain/function: PF00427 PBS_linker_poly [H]

EC number: NA

Molecular weight: Translated: 28657; Mature: 28526

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIPLLPYAPITQNARVERIRVGSDEDLKVVALDQSMDADNLKTVIESAYRQIFFHAFKS
CCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
DRDRFLESQLRNGQITVRDFIRGLCLSDTFTRTFYGFNSNYKVVRHLVERLLGRKTSGKG
HHHHHHHHHHCCCCEEHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC
EELSWSIVIATKGVAGMVDALLDSEEYLDNFGFDTVPYQRHRVLPGRDLGDTPFNITTPR
CCEEEEEEEEECCHHHHHHHHHCCHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC
YDEYHRNKLGFPQIIFTGDIKRLPERAKIKRGGNPADYMDWVGSMGAVNMPGSQAQTSGD
CHHHHHCCCCCCEEEEECCHHHCCHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCH
YMSRVPYRSIGR
HHHHCCHHHCCC
>Mature Secondary Structure 
AIPLLPYAPITQNARVERIRVGSDEDLKVVALDQSMDADNLKTVIESAYRQIFFHAFKS
CCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
DRDRFLESQLRNGQITVRDFIRGLCLSDTFTRTFYGFNSNYKVVRHLVERLLGRKTSGKG
HHHHHHHHHHCCCCEEHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC
EELSWSIVIATKGVAGMVDALLDSEEYLDNFGFDTVPYQRHRVLPGRDLGDTPFNITTPR
CCEEEEEEEEECCHHHHHHHHHCCHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC
YDEYHRNKLGFPQIIFTGDIKRLPERAKIKRGGNPADYMDWVGSMGAVNMPGSQAQTSGD
CHHHHHCCCCCCEEEEECCHHHCCHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCH
YMSRVPYRSIGR
HHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2164365 [H]