Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148243035

Identifier: 148243035

GI number: 148243035

Start: 1681993

End: 1682277

Strand: Direct

Name: 148243035

Synonym: SynRCC307_1936

Alternate gene names: NA

Gene position: 1681993-1682277 (Clockwise)

Preceding gene: 148243026

Following gene: 148243039

Centisome position: 75.6

GC content: 56.14

Gene sequence:

>285_bases
ATGACCAGCACCAACTTCGATCCCCGCATCCTCAAGGCGCCCCACCCCGTTCCGGGGGCGCCCGATAACTGGAAGCGCTT
TTTCAGCATCAACACCGATGCCAAGGTGATTGGCATTCAATACATCGCCACTTCGCTGTTGTTCCTCTTGGTGGGAGGAC
TGCTGGCGATGATTGTCCGCGGCGAGTTGATCACACCAGAGGCGGATTTGGTGGATCCCACCGTTTACAACGGCCTCTAC
ACGATGCATGGAACAGTGATGCTGTTCCTGTTTTTGTTCCCCGGT

Upstream 100 bases:

>100_bases
TGGCAACGGGGGATCGGGGCTGGGCCACCGTGCCACCCGCGCCACCCCCAATGGTCAATGACCCCGGCGATGCCTCCATC
CCCCACGACGCCTGAGCACC

Downstream 100 bases:

>100_bases
CCTCAACGGCCTGAACAATCTGCTGATTCCCACCATGATCGGCGCGCCCGACATGGCGTTCCCCAAGTTGAACGCGGCGG
CGTTCTGGCTGGTGCCGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MTSTNFDPRILKAPHPVPGAPDNWKRFFSINTDAKVIGIQYIATSLLFLLVGGLLAMIVRGELITPEADLVDPTVYNGLY
TMHGTVMLFLFLFPG

Sequences:

>Translated_95_residues
TGEQKQEQHHCSMHRVEAVVNGGIHQIRLWCDQLAADNHRQQSSHQEEQQRSGDVLNANHLGIGVDAEKALPVIGRPRNG
VGRLEDAGIEVGAGH
>Mature_95_residues
TGEQKQEQHHCSMHRVEAVVNGGIHQIRLWCDQLAADNHRQQSSHQEEQQRSGDVLNANHLGIGVDAEKALPVIGRPRNG
VGRLEDAGIEVGAGH

Specific function: Unknown

COG id: COG0843

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10384; Mature: 10384

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
TGEQKQEQHHCSMHRVEAVVNGGIHQIRLWCDQLAADNHRQQSSHQEEQQRSGDVLNANH
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC
LGIGVDAEKALPVIGRPRNGVGRLEDAGIEVGAGH
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA