| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148243024
Identifier: 148243024
GI number: 148243024
Start: 1669742
End: 1670434
Strand: Direct
Name: 148243024
Synonym: SynRCC307_1925
Alternate gene names: NA
Gene position: 1669742-1670434 (Clockwise)
Preceding gene: 148243023
Following gene: 148243025
Centisome position: 75.05
GC content: 68.4
Gene sequence:
>693_bases TTGGGTTCTTCTTGGCAGCTGATCGGCATGCACGGCTGGGGCAGCGACCAGCGCAACTGGGACGCTTTTGAGCCCCACTG CCAGCAACGGGGCTGGCCGCTGCAACGGCTGGATCGCGGCTACGGCCGCTACCCGGAGCAAAGCGCCAGCTGGTTGCCGC AGGGCCGGCGCGCCCTGCTGCTCAGCTCCCTCGGCAGTCAGCTGGTGCCCAGCGACCTGCTGCAGCAAGCCGAAGCCGTG GTGCTACTGGCCAGTTTTGGCCGCTTTGTGCCGGCGGGGGCAGCGGGGCGGCCCTTGCAGCAGGCCCTGCGGCTGATGGA TCAGCGCCTGGATGCTGGCGATCTGCTCGGCCTGTTTGCCGACTTCCGAATCAAGGTGGCCGAGCCCCAGGCCGTGGAGC ACCTGCCCCCTGGCATCGAAGACGGCCCGATATCGACCGAGGGGCTGCAGCGCTTGCGCCAAGACCTGGAGCTGTTGCGC TGCTGCCAAGGCCTGCCCGGCGCCTTCCCAGAGCAAGCAGCCGTGCTGATCGTGGAAGCGATGGCCGACACCATCATTCA CCCCAACAGCCGCGCAGCCCTGCGGCAGGAACTGCCCCAGGCCGAGCTGGTGGAGTTAGCCGGCGTTGGCCATGGACTGC TCAGCCCTGGGTTGTGCGAGCAGGTGGTGGGCTGGCTCGACGCGCTGCCTTGA
Upstream 100 bases:
>100_bases CCGCAGCTTCCCGAAGACGCGCTGAGCCGGGTGCTGGCAACGCTGGAGCCCTTCAAACGGTCGTGATCAAAGATGGACTC CACACCGCAGTGATGCGCCG
Downstream 100 bases:
>100_bases ACGCCTTTGCCCGAGGAGCGAGCTGCTATGCCCGCAACGCCCGGCTGCAACAGGCCGTGGCCTGGCGCCTAGCCCGCCAT TGCCGTGATTTGCCGCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MGSSWQLIGMHGWGSDQRNWDAFEPHCQQRGWPLQRLDRGYGRYPEQSASWLPQGRRALLLSSLGSQLVPSDLLQQAEAV VLLASFGRFVPAGAAGRPLQQALRLMDQRLDAGDLLGLFADFRIKVAEPQAVEHLPPGIEDGPISTEGLQRLRQDLELLR CCQGLPGAFPEQAAVLIVEAMADTIIHPNSRAALRQELPQAELVELAGVGHGLLSPGLCEQVVGWLDALP
Sequences:
>Translated_230_residues MGSSWQLIGMHGWGSDQRNWDAFEPHCQQRGWPLQRLDRGYGRYPEQSASWLPQGRRALLLSSLGSQLVPSDLLQQAEAV VLLASFGRFVPAGAAGRPLQQALRLMDQRLDAGDLLGLFADFRIKVAEPQAVEHLPPGIEDGPISTEGLQRLRQDLELLR CCQGLPGAFPEQAAVLIVEAMADTIIHPNSRAALRQELPQAELVELAGVGHGLLSPGLCEQVVGWLDALP >Mature_229_residues GSSWQLIGMHGWGSDQRNWDAFEPHCQQRGWPLQRLDRGYGRYPEQSASWLPQGRRALLLSSLGSQLVPSDLLQQAEAVV LLASFGRFVPAGAAGRPLQQALRLMDQRLDAGDLLGLFADFRIKVAEPQAVEHLPPGIEDGPISTEGLQRLRQDLELLRC CQGLPGAFPEQAAVLIVEAMADTIIHPNSRAALRQELPQAELVELAGVGHGLLSPGLCEQVVGWLDALP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25088; Mature: 24957
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSSWQLIGMHGWGSDQRNWDAFEPHCQQRGWPLQRLDRGYGRYPEQSASWLPQGRRALL CCCCEEEEEECCCCCCCCCCCCCCHHHHHCCCCHHHHHHHCCCCCCHHHHHCCCCHHHHH LSSLGSQLVPSDLLQQAEAVVLLASFGRFVPAGAAGRPLQQALRLMDQRLDAGDLLGLFA HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHH DFRIKVAEPQAVEHLPPGIEDGPISTEGLQRLRQDLELLRCCQGLPGAFPEQAAVLIVEA HHEEEECCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH MADTIIHPNSRAALRQELPQAELVELAGVGHGLLSPGLCEQVVGWLDALP HHHHHCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure GSSWQLIGMHGWGSDQRNWDAFEPHCQQRGWPLQRLDRGYGRYPEQSASWLPQGRRALL CCCEEEEEECCCCCCCCCCCCCCHHHHHCCCCHHHHHHHCCCCCCHHHHHCCCCHHHHH LSSLGSQLVPSDLLQQAEAVVLLASFGRFVPAGAAGRPLQQALRLMDQRLDAGDLLGLFA HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHH DFRIKVAEPQAVEHLPPGIEDGPISTEGLQRLRQDLELLRCCQGLPGAFPEQAAVLIVEA HHEEEECCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH MADTIIHPNSRAALRQELPQAELVELAGVGHGLLSPGLCEQVVGWLDALP HHHHHCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA