Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148243024

Identifier: 148243024

GI number: 148243024

Start: 1669742

End: 1670434

Strand: Direct

Name: 148243024

Synonym: SynRCC307_1925

Alternate gene names: NA

Gene position: 1669742-1670434 (Clockwise)

Preceding gene: 148243023

Following gene: 148243025

Centisome position: 75.05

GC content: 68.4

Gene sequence:

>693_bases
TTGGGTTCTTCTTGGCAGCTGATCGGCATGCACGGCTGGGGCAGCGACCAGCGCAACTGGGACGCTTTTGAGCCCCACTG
CCAGCAACGGGGCTGGCCGCTGCAACGGCTGGATCGCGGCTACGGCCGCTACCCGGAGCAAAGCGCCAGCTGGTTGCCGC
AGGGCCGGCGCGCCCTGCTGCTCAGCTCCCTCGGCAGTCAGCTGGTGCCCAGCGACCTGCTGCAGCAAGCCGAAGCCGTG
GTGCTACTGGCCAGTTTTGGCCGCTTTGTGCCGGCGGGGGCAGCGGGGCGGCCCTTGCAGCAGGCCCTGCGGCTGATGGA
TCAGCGCCTGGATGCTGGCGATCTGCTCGGCCTGTTTGCCGACTTCCGAATCAAGGTGGCCGAGCCCCAGGCCGTGGAGC
ACCTGCCCCCTGGCATCGAAGACGGCCCGATATCGACCGAGGGGCTGCAGCGCTTGCGCCAAGACCTGGAGCTGTTGCGC
TGCTGCCAAGGCCTGCCCGGCGCCTTCCCAGAGCAAGCAGCCGTGCTGATCGTGGAAGCGATGGCCGACACCATCATTCA
CCCCAACAGCCGCGCAGCCCTGCGGCAGGAACTGCCCCAGGCCGAGCTGGTGGAGTTAGCCGGCGTTGGCCATGGACTGC
TCAGCCCTGGGTTGTGCGAGCAGGTGGTGGGCTGGCTCGACGCGCTGCCTTGA

Upstream 100 bases:

>100_bases
CCGCAGCTTCCCGAAGACGCGCTGAGCCGGGTGCTGGCAACGCTGGAGCCCTTCAAACGGTCGTGATCAAAGATGGACTC
CACACCGCAGTGATGCGCCG

Downstream 100 bases:

>100_bases
ACGCCTTTGCCCGAGGAGCGAGCTGCTATGCCCGCAACGCCCGGCTGCAACAGGCCGTGGCCTGGCGCCTAGCCCGCCAT
TGCCGTGATTTGCCGCTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MGSSWQLIGMHGWGSDQRNWDAFEPHCQQRGWPLQRLDRGYGRYPEQSASWLPQGRRALLLSSLGSQLVPSDLLQQAEAV
VLLASFGRFVPAGAAGRPLQQALRLMDQRLDAGDLLGLFADFRIKVAEPQAVEHLPPGIEDGPISTEGLQRLRQDLELLR
CCQGLPGAFPEQAAVLIVEAMADTIIHPNSRAALRQELPQAELVELAGVGHGLLSPGLCEQVVGWLDALP

Sequences:

>Translated_230_residues
MGSSWQLIGMHGWGSDQRNWDAFEPHCQQRGWPLQRLDRGYGRYPEQSASWLPQGRRALLLSSLGSQLVPSDLLQQAEAV
VLLASFGRFVPAGAAGRPLQQALRLMDQRLDAGDLLGLFADFRIKVAEPQAVEHLPPGIEDGPISTEGLQRLRQDLELLR
CCQGLPGAFPEQAAVLIVEAMADTIIHPNSRAALRQELPQAELVELAGVGHGLLSPGLCEQVVGWLDALP
>Mature_229_residues
GSSWQLIGMHGWGSDQRNWDAFEPHCQQRGWPLQRLDRGYGRYPEQSASWLPQGRRALLLSSLGSQLVPSDLLQQAEAVV
LLASFGRFVPAGAAGRPLQQALRLMDQRLDAGDLLGLFADFRIKVAEPQAVEHLPPGIEDGPISTEGLQRLRQDLELLRC
CQGLPGAFPEQAAVLIVEAMADTIIHPNSRAALRQELPQAELVELAGVGHGLLSPGLCEQVVGWLDALP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25088; Mature: 24957

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSSWQLIGMHGWGSDQRNWDAFEPHCQQRGWPLQRLDRGYGRYPEQSASWLPQGRRALL
CCCCEEEEEECCCCCCCCCCCCCCHHHHHCCCCHHHHHHHCCCCCCHHHHHCCCCHHHHH
LSSLGSQLVPSDLLQQAEAVVLLASFGRFVPAGAAGRPLQQALRLMDQRLDAGDLLGLFA
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHH
DFRIKVAEPQAVEHLPPGIEDGPISTEGLQRLRQDLELLRCCQGLPGAFPEQAAVLIVEA
HHEEEECCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
MADTIIHPNSRAALRQELPQAELVELAGVGHGLLSPGLCEQVVGWLDALP
HHHHHCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
GSSWQLIGMHGWGSDQRNWDAFEPHCQQRGWPLQRLDRGYGRYPEQSASWLPQGRRALL
CCCEEEEEECCCCCCCCCCCCCCHHHHHCCCCHHHHHHHCCCCCCHHHHHCCCCHHHHH
LSSLGSQLVPSDLLQQAEAVVLLASFGRFVPAGAAGRPLQQALRLMDQRLDAGDLLGLFA
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHH
DFRIKVAEPQAVEHLPPGIEDGPISTEGLQRLRQDLELLRCCQGLPGAFPEQAAVLIVEA
HHEEEECCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
MADTIIHPNSRAALRQELPQAELVELAGVGHGLLSPGLCEQVVGWLDALP
HHHHHCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA