| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148243025
Identifier: 148243025
GI number: 148243025
Start: 1670395
End: 1671174
Strand: Direct
Name: 148243025
Synonym: SynRCC307_1926
Alternate gene names: NA
Gene position: 1670395-1671174 (Clockwise)
Preceding gene: 148243024
Following gene: 148243026
Centisome position: 75.08
GC content: 68.59
Gene sequence:
>780_bases GTGCGAGCAGGTGGTGGGCTGGCTCGACGCGCTGCCTTGAACGCCTTTGCCCGAGGAGCGAGCTGCTATGCCCGCAACGC CCGGCTGCAACAGGCCGTGGCCTGGCGCCTAGCCCGCCATTGCCGTGATTTGCCGCTGCCTGAGGGCCCCGTGGTGGATC TCGGTGCAGGCTCAGGCAACTTGAGCCGGGCCCTCAGCGCCCAACGGCCAGGGCTCGATCCCCTGCTGGTGGACAACTGC CCGGAACTGCTGGCGGAGGCCGCCGTGCCAGCAGGCCGCTGCCGGCCATGGGATCTCAACGCCGGGCTGCCGCCAGAAGC GCGCGCAGCAGCATTGCTTCTGAGCAGCTTTGCCTTGCATTGGCTCAAGGCACCGGAGCAGCAGTTGCGGCACTGGTGCG AGCGGCTGCTGCCTGGTGGCTGGCTGGCCTTGGCGGTGCCGCTGCAGGGCAGCTTCACCAGTTGGCATCAGGCCGCCGAG GGCGCTGGGGTGGCCTGTTCCGCCTTGCCCTTGCCGCGAGAGCTGGATCTATTGGCGGCCCTGCCGCCGGGGTGCCGGCC GCACCGGCAGCAGCGGCTGCGCTTCAGCTGCCGCTATCCCTCAGCGATGGCGTTCCTCGCTGAGCTCAAACGCCATGGCG TCAATGGCGGTGCCAGCGCCCAGCTCAGCCCCACAGAACTGCGCCGGCTGCTCAAGCACTGGCCCATGCAGGAGCAGGAT CAAGGGGTGAGCCTGAACTGGGATCTCTTGCTGCTGCTCGCTTGTCGTGATGAGCCCTAA
Upstream 100 bases:
>100_bases TCATTCACCCCAACAGCCGCGCAGCCCTGCGGCAGGAACTGCCCCAGGCCGAGCTGGTGGAGTTAGCCGGCGTTGGCCAT GGACTGCTCAGCCCTGGGTT
Downstream 100 bases:
>100_bases ACCCCGCCATCCCCATCAACTGGTGGTGGTGGGCACCGACACCGACGTGGGCAAGACCGTGATCAGCGCCCTGTTGGTGC AAGGCCTGGGCGCCCACTAC
Product: putative SAM-dependent methyltransferase
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase; Methylase Involved In Ubiquinone/Menaquinone Biosynthesis; Biotin Biosynthesis Protein BioC; Biotin Biosynthesis
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MRAGGGLARRAALNAFARGASCYARNARLQQAVAWRLARHCRDLPLPEGPVVDLGAGSGNLSRALSAQRPGLDPLLVDNC PELLAEAAVPAGRCRPWDLNAGLPPEARAAALLLSSFALHWLKAPEQQLRHWCERLLPGGWLALAVPLQGSFTSWHQAAE GAGVACSALPLPRELDLLAALPPGCRPHRQQRLRFSCRYPSAMAFLAELKRHGVNGGASAQLSPTELRRLLKHWPMQEQD QGVSLNWDLLLLLACRDEP
Sequences:
>Translated_259_residues MRAGGGLARRAALNAFARGASCYARNARLQQAVAWRLARHCRDLPLPEGPVVDLGAGSGNLSRALSAQRPGLDPLLVDNC PELLAEAAVPAGRCRPWDLNAGLPPEARAAALLLSSFALHWLKAPEQQLRHWCERLLPGGWLALAVPLQGSFTSWHQAAE GAGVACSALPLPRELDLLAALPPGCRPHRQQRLRFSCRYPSAMAFLAELKRHGVNGGASAQLSPTELRRLLKHWPMQEQD QGVSLNWDLLLLLACRDEP >Mature_259_residues MRAGGGLARRAALNAFARGASCYARNARLQQAVAWRLARHCRDLPLPEGPVVDLGAGSGNLSRALSAQRPGLDPLLVDNC PELLAEAAVPAGRCRPWDLNAGLPPEARAAALLLSSFALHWLKAPEQQLRHWCERLLPGGWLALAVPLQGSFTSWHQAAE GAGVACSALPLPRELDLLAALPPGCRPHRQQRLRFSCRYPSAMAFLAELKRHGVNGGASAQLSPTELRRLLKHWPMQEQD QGVSLNWDLLLLLACRDEP
Specific function: Unknown
COG id: COG4106
COG function: function code R; Trans-aconitate methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28115; Mature: 28115
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAGGGLARRAALNAFARGASCYARNARLQQAVAWRLARHCRDLPLPEGPVVDLGAGSGN CCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCH LSRALSAQRPGLDPLLVDNCPELLAEAAVPAGRCRPWDLNAGLPPEARAAALLLSSFALH HHHHHHHCCCCCCCHHHHCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH WLKAPEQQLRHWCERLLPGGWLALAVPLQGSFTSWHQAAEGAGVACSALPLPRELDLLAA HHCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHCCCCCEEECCCCCCHHHHHHC LPPGCRPHRQQRLRFSCRYPSAMAFLAELKRHGVNGGASAQLSPTELRRLLKHWPMQEQD CCCCCCHHHHHHHHECCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCC QGVSLNWDLLLLLACRDEP CCCCCCHHEEEEEEECCCC >Mature Secondary Structure MRAGGGLARRAALNAFARGASCYARNARLQQAVAWRLARHCRDLPLPEGPVVDLGAGSGN CCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCH LSRALSAQRPGLDPLLVDNCPELLAEAAVPAGRCRPWDLNAGLPPEARAAALLLSSFALH HHHHHHHCCCCCCCHHHHCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH WLKAPEQQLRHWCERLLPGGWLALAVPLQGSFTSWHQAAEGAGVACSALPLPRELDLLAA HHCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHCCCCCEEECCCCCCHHHHHHC LPPGCRPHRQQRLRFSCRYPSAMAFLAELKRHGVNGGASAQLSPTELRRLLKHWPMQEQD CCCCCCHHHHHHHHECCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCC QGVSLNWDLLLLLACRDEP CCCCCCHHEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA