Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is ald [H]

Identifier: 148242970

GI number: 148242970

Start: 1630720

End: 1631859

Strand: Direct

Name: ald [H]

Synonym: SynRCC307_1871

Alternate gene names: 148242970

Gene position: 1630720-1631859 (Clockwise)

Preceding gene: 148242969

Following gene: 148242971

Centisome position: 73.29

GC content: 68.51

Gene sequence:

>1140_bases
ATGGCCGCTCCCCAACCCGCCGCCTCGATGAGCAGCATCGGCATTCCTCGGGAGATCAAGCCCGATGAGCAGCGGGTGGC
TCTCACCCCCGATGCCGTGCGCGAGCTGGTGAGCATTGGCCTGGAGGTGCGAATTGAGCAGGGCGCTGGCCGCGGAGCTG
GCATCGATGACGCCAGCTTTGCCGCCGCCGGCGCAGCCATGGTGTCCAAAGAGGAGGCCTGGGCCGCTCACCTGGTGGTG
AAGGTGAAAGAACCGCAGCCCGAGGAGTTCGGCTTCTTGCGCCGCGACATGGTGCTGTTCACCTACCTGCACCTGGCGGC
CTACCCCGCTGTTGGCAAGGCCCTCCTGGAGAGCGGCTGCACCTCGATTGCCTACGAAACGGTGCAGCTGGAGAACGGCA
GCCTGCCCCTGCTGGCGCCGATGAGCGAAATCGCCGGCCGGCTCGCCACCCAAGCAGGGGCCTACCTGCTGGAGCGTCCC
CATGGCGGTCGCGGCGTGCTGCTCGGCGGCTGCACCGGCGTCAAGCCCGCCCGGGTGGTGGTGTTGGGCGCCGGCACCGT
GGGCTGGAACGCGGCCCGCGTCGCAGCAGCCATGGATGCCGAGGTGATGCTGCTGGATCGCTCCCCGCAGCGGCTGCGCA
ATCTGGAAGCCGACCGGCGCGGACGCCTGGTCAGCTTGGTGAGCAGCCGCGGCTTGATCGAACGGGTGATCCCCACCGCC
GATCTACTGATCGGTGCGGTGCTCACCCCGGGCGGGCGGGCCCCAACCCTGGTGGATGAAGCGCTGGTGCAACAGATGCG
CCCCGGCTCGGTGATCGTCGATGTGGCCATCGATCAAGGCGGCTGCATCGCCAGCAGCGAGGAGACCACCCACACCGAAC
CGGTGATCGAAAAATTTGGCGTGCAGCACTACGCCGTCGGCAACATGCCTGGCGCTGTTCCCTTCACCTCCACCGAAGCG
CTGGTGAGCGTGACGCTGCCCTACATCGTCACCATTGCCGGACGGGGCCTGAGCGAAGCGGTGACCGAGCGCCCCGAGCT
GCTCTCCGGGCTCAACACCGTCGACGGGGCGGTGTGCCATCCCGGTGTTGCCCGGGCCCTCGATGTGCCCCCACGCCACC
CCATGGCCTGCCTGCGCTAA

Upstream 100 bases:

>100_bases
GAGTGCTCGCTCCTTCGGTTGCGGTTGGCGCATGCCAATCTCCGCCAGAACTGGCGCCGAAGGCTAGGAATCGCCAGGCT
GATAGCAGAACCAACCCACC

Downstream 100 bases:

>100_bases
GCAACGTGAATTAACGGCTGCTGAGGGGAAAGAAGAGATTCATCGCATCCCTTTGGCTTCGCCAAACCTCTGGATACACC
AGGCAAGCACCCCGCCCGGC

Product: alanine dehydrogenase

Products: NA

Alternate protein names: Stage V sporulation protein N [H]

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MAAPQPAASMSSIGIPREIKPDEQRVALTPDAVRELVSIGLEVRIEQGAGRGAGIDDASFAAAGAAMVSKEEAWAAHLVV
KVKEPQPEEFGFLRRDMVLFTYLHLAAYPAVGKALLESGCTSIAYETVQLENGSLPLLAPMSEIAGRLATQAGAYLLERP
HGGRGVLLGGCTGVKPARVVVLGAGTVGWNAARVAAAMDAEVMLLDRSPQRLRNLEADRRGRLVSLVSSRGLIERVIPTA
DLLIGAVLTPGGRAPTLVDEALVQQMRPGSVIVDVAIDQGGCIASSEETTHTEPVIEKFGVQHYAVGNMPGAVPFTSTEA
LVSVTLPYIVTIAGRGLSEAVTERPELLSGLNTVDGAVCHPGVARALDVPPRHPMACLR

Sequences:

>Translated_379_residues
MAAPQPAASMSSIGIPREIKPDEQRVALTPDAVRELVSIGLEVRIEQGAGRGAGIDDASFAAAGAAMVSKEEAWAAHLVV
KVKEPQPEEFGFLRRDMVLFTYLHLAAYPAVGKALLESGCTSIAYETVQLENGSLPLLAPMSEIAGRLATQAGAYLLERP
HGGRGVLLGGCTGVKPARVVVLGAGTVGWNAARVAAAMDAEVMLLDRSPQRLRNLEADRRGRLVSLVSSRGLIERVIPTA
DLLIGAVLTPGGRAPTLVDEALVQQMRPGSVIVDVAIDQGGCIASSEETTHTEPVIEKFGVQHYAVGNMPGAVPFTSTEA
LVSVTLPYIVTIAGRGLSEAVTERPELLSGLNTVDGAVCHPGVARALDVPPRHPMACLR
>Mature_378_residues
AAPQPAASMSSIGIPREIKPDEQRVALTPDAVRELVSIGLEVRIEQGAGRGAGIDDASFAAAGAAMVSKEEAWAAHLVVK
VKEPQPEEFGFLRRDMVLFTYLHLAAYPAVGKALLESGCTSIAYETVQLENGSLPLLAPMSEIAGRLATQAGAYLLERPH
GGRGVLLGGCTGVKPARVVVLGAGTVGWNAARVAAAMDAEVMLLDRSPQRLRNLEADRRGRLVSLVSSRGLIERVIPTAD
LLIGAVLTPGGRAPTLVDEALVQQMRPGSVIVDVAIDQGGCIASSEETTHTEPVIEKFGVQHYAVGNMPGAVPFTSTEAL
VSVTLPYIVTIAGRGLSEAVTERPELLSGLNTVDGAVCHPGVARALDVPPRHPMACLR

Specific function: This enzyme is a key factor in the assimilation of L- alanine as an energy source through the tricarboxylic acid cycle during sporulation [H]

COG id: COG0686

COG function: function code E; Alanine dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AlaDH/PNT family [H]

Homologues:

Organism=Homo sapiens, GI122939155, Length=331, Percent_Identity=29.607250755287, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI122939153, Length=331, Percent_Identity=29.607250755287, Blast_Score=110, Evalue=2e-24,
Organism=Escherichia coli, GI1787887, Length=329, Percent_Identity=30.0911854103343, Blast_Score=128, Evalue=7e-31,
Organism=Caenorhabditis elegans, GI17550456, Length=360, Percent_Identity=28.0555555555556, Blast_Score=117, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007698
- InterPro:   IPR008142
- InterPro:   IPR008143
- InterPro:   IPR007886
- InterPro:   IPR008141 [H]

Pfam domain/function: PF01262 AlaDh_PNT_C; PF05222 AlaDh_PNT_N [H]

EC number: =1.4.1.1 [H]

Molecular weight: Translated: 39715; Mature: 39584

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAPQPAASMSSIGIPREIKPDEQRVALTPDAVRELVSIGLEVRIEQGAGRGAGIDDASF
CCCCCCCCHHHHCCCCCCCCCCCCEEEECHHHHHHHHHCCEEEEEECCCCCCCCCCCHHH
AAAGAAMVSKEEAWAAHLVVKVKEPQPEEFGFLRRDMVLFTYLHLAAYPAVGKALLESGC
HHHHHHHHHHHHHCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TSIAYETVQLENGSLPLLAPMSEIAGRLATQAGAYLLERPHGGRGVLLGGCTGVKPARVV
HHHEEEEEEECCCCCCEECCHHHHHHHHHHHHCHHEEECCCCCCEEEEECCCCCCCEEEE
VLGAGTVGWNAARVAAAMDAEVMLLDRSPQRLRNLEADRRGRLVSLVSSRGLIERVIPTA
EEECCCCCCCHHHHHHHCCCEEEEECCCHHHHHCCCHHHCCCCHHHHHCCCHHHHHCCHH
DLLIGAVLTPGGRAPTLVDEALVQQMRPGSVIVDVAIDQGGCIASSEETTHTEPVIEKFG
HHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCEECCCCCCCHHHHHHHHC
VQHYAVGNMPGAVPFTSTEALVSVTLPYIVTIAGRGLSEAVTERPELLSGLNTVDGAVCH
CCEEEECCCCCCCCCCCCHHHHHHHHHHHEEECCCCHHHHHHCCHHHHHCCCCCCCCCCC
PGVARALDVPPRHPMACLR
CCHHHHCCCCCCCCHHHCC
>Mature Secondary Structure 
AAPQPAASMSSIGIPREIKPDEQRVALTPDAVRELVSIGLEVRIEQGAGRGAGIDDASF
CCCCCCCHHHHCCCCCCCCCCCCEEEECHHHHHHHHHCCEEEEEECCCCCCCCCCCHHH
AAAGAAMVSKEEAWAAHLVVKVKEPQPEEFGFLRRDMVLFTYLHLAAYPAVGKALLESGC
HHHHHHHHHHHHHCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TSIAYETVQLENGSLPLLAPMSEIAGRLATQAGAYLLERPHGGRGVLLGGCTGVKPARVV
HHHEEEEEEECCCCCCEECCHHHHHHHHHHHHCHHEEECCCCCCEEEEECCCCCCCEEEE
VLGAGTVGWNAARVAAAMDAEVMLLDRSPQRLRNLEADRRGRLVSLVSSRGLIERVIPTA
EEECCCCCCCHHHHHHHCCCEEEEECCCHHHHHCCCHHHCCCCHHHHHCCCHHHHHCCHH
DLLIGAVLTPGGRAPTLVDEALVQQMRPGSVIVDVAIDQGGCIASSEETTHTEPVIEKFG
HHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCEECCCCCCCHHHHHHHHC
VQHYAVGNMPGAVPFTSTEALVSVTLPYIVTIAGRGLSEAVTERPELLSGLNTVDGAVCH
CCEEEECCCCCCCCCCCCHHHHHHHHHHHEEECCCCHHHHHHCCHHHHHCCCCCCCCCCC
PGVARALDVPPRHPMACLR
CCHHHHCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8226620; 9384377 [H]