| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242953
Identifier: 148242953
GI number: 148242953
Start: 1614254
End: 1615102
Strand: Direct
Name: 148242953
Synonym: SynRCC307_1854
Alternate gene names: NA
Gene position: 1614254-1615102 (Clockwise)
Preceding gene: 148242952
Following gene: 148242954
Centisome position: 72.55
GC content: 66.08
Gene sequence:
>849_bases GTGACTTGCCCTCCCCCGGTGTCGCCGCGCCGCTCGCGACTACCCAAGGTTTGGATCTGGAGCTCCATCAGCCTGGTGGG GGCCGTGGCGCTGTCGTTGGGCTGGTGGCAGAGCCAGCTCCCGGCCCGCCTGGCTCAAGCGGTCGACAACGACCAACTCG ATACCTGTTTGAGGCTGGGCGAACAGCTGGCGGCGCTCCGCAAACTCAACAGCGAAGAGCAGGCCATCGTGGCGGGCTGC CTGCGCACGCAAGCCAGCCGCAACTGGGAGCAAAAACGGCTGCGGTTAGCCCTCGACCAACAGCGCCAACTGGTGCTGCG CAGCGGCAACCCAGCTGTCGAAGAGCGGCGGCTGCAGCAATGGCGCCAGCAGATTCAACGCCAAGCCATGGAGGCCTACC AGCGCGGCGAGGCCCGCCAGGCCATGGCCCTGCTCACCAGCAGTGGCGAAACCCGCTTCCCCGATGGGCAGCAGCTCCAC GCCACGCTGGAGGACCACTGGGCTGCCAACCGCTACGCCTACAGCCAAGCCGCAAGTGCCGCTGCTGGAGAGGATTGGTG GGAAGCCTTGGATCAGCTCAATCAGCTGAACCACCCCTGGTGGCAGCGCAAAGCCTTGAGCCTGCGCACCGACGTCAGTC GTCAAGCCGCAGCGATGCAGCGCAGCAATCAACCCAAAGACAGCCACCGCGACAGCGGCGACCAACCAATCTCCGACAGC GAACTCGATGCCGCCGTGCAGCGCCACCTCTCGCTGGGGTTAAGCGCCTGGCAGGCATTCGAACTGGGCTGCAGCGAACT CGGCGGGCAGGTCTTGGAACAGGGGCCGGAGAGCAGCTGCCAACGTTGA
Upstream 100 bases:
>100_bases GGCTGCGCTTCGGGGTCGACGCCGAACGGCAGCTTTGGCTGGAGGGGTTTGATCTTGTTGGCGAGCAACGACTCTCCCGC CAAATCCTCGGCATTGTGGA
Downstream 100 bases:
>100_bases GTGACAGGATGTGTTGGCTTGAGAGCCGCAGCCATGCAGCAGGGTGACCGTGTCCGGGTAAAGGAGTCTGTGGTGGTGTT CACCCATCCAGAACATCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MTCPPPVSPRRSRLPKVWIWSSISLVGAVALSLGWWQSQLPARLAQAVDNDQLDTCLRLGEQLAALRKLNSEEQAIVAGC LRTQASRNWEQKRLRLALDQQRQLVLRSGNPAVEERRLQQWRQQIQRQAMEAYQRGEARQAMALLTSSGETRFPDGQQLH ATLEDHWAANRYAYSQAASAAAGEDWWEALDQLNQLNHPWWQRKALSLRTDVSRQAAAMQRSNQPKDSHRDSGDQPISDS ELDAAVQRHLSLGLSAWQAFELGCSELGGQVLEQGPESSCQR
Sequences:
>Translated_282_residues MTCPPPVSPRRSRLPKVWIWSSISLVGAVALSLGWWQSQLPARLAQAVDNDQLDTCLRLGEQLAALRKLNSEEQAIVAGC LRTQASRNWEQKRLRLALDQQRQLVLRSGNPAVEERRLQQWRQQIQRQAMEAYQRGEARQAMALLTSSGETRFPDGQQLH ATLEDHWAANRYAYSQAASAAAGEDWWEALDQLNQLNHPWWQRKALSLRTDVSRQAAAMQRSNQPKDSHRDSGDQPISDS ELDAAVQRHLSLGLSAWQAFELGCSELGGQVLEQGPESSCQR >Mature_281_residues TCPPPVSPRRSRLPKVWIWSSISLVGAVALSLGWWQSQLPARLAQAVDNDQLDTCLRLGEQLAALRKLNSEEQAIVAGCL RTQASRNWEQKRLRLALDQQRQLVLRSGNPAVEERRLQQWRQQIQRQAMEAYQRGEARQAMALLTSSGETRFPDGQQLHA TLEDHWAANRYAYSQAASAAAGEDWWEALDQLNQLNHPWWQRKALSLRTDVSRQAAAMQRSNQPKDSHRDSGDQPISDSE LDAAVQRHLSLGLSAWQAFELGCSELGGQVLEQGPESSCQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31794; Mature: 31663
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCPPPVSPRRSRLPKVWIWSSISLVGAVALSLGWWQSQLPARLAQAVDNDQLDTCLRLG CCCCCCCCCHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH EQLAALRKLNSEEQAIVAGCLRTQASRNWEQKRLRLALDQQRQLVLRSGNPAVEERRLQQ HHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH WRQQIQRQAMEAYQRGEARQAMALLTSSGETRFPDGQQLHATLEDHWAANRYAYSQAASA HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AAGEDWWEALDQLNQLNHPWWQRKALSLRTDVSRQAAAMQRSNQPKDSHRDSGDQPISDS CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCHH ELDAAVQRHLSLGLSAWQAFELGCSELGGQVLEQGPESSCQR HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCC >Mature Secondary Structure TCPPPVSPRRSRLPKVWIWSSISLVGAVALSLGWWQSQLPARLAQAVDNDQLDTCLRLG CCCCCCCCHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH EQLAALRKLNSEEQAIVAGCLRTQASRNWEQKRLRLALDQQRQLVLRSGNPAVEERRLQQ HHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH WRQQIQRQAMEAYQRGEARQAMALLTSSGETRFPDGQQLHATLEDHWAANRYAYSQAASA HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AAGEDWWEALDQLNQLNHPWWQRKALSLRTDVSRQAAAMQRSNQPKDSHRDSGDQPISDS CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCHH ELDAAVQRHLSLGLSAWQAFELGCSELGGQVLEQGPESSCQR HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA