Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148242953

Identifier: 148242953

GI number: 148242953

Start: 1614254

End: 1615102

Strand: Direct

Name: 148242953

Synonym: SynRCC307_1854

Alternate gene names: NA

Gene position: 1614254-1615102 (Clockwise)

Preceding gene: 148242952

Following gene: 148242954

Centisome position: 72.55

GC content: 66.08

Gene sequence:

>849_bases
GTGACTTGCCCTCCCCCGGTGTCGCCGCGCCGCTCGCGACTACCCAAGGTTTGGATCTGGAGCTCCATCAGCCTGGTGGG
GGCCGTGGCGCTGTCGTTGGGCTGGTGGCAGAGCCAGCTCCCGGCCCGCCTGGCTCAAGCGGTCGACAACGACCAACTCG
ATACCTGTTTGAGGCTGGGCGAACAGCTGGCGGCGCTCCGCAAACTCAACAGCGAAGAGCAGGCCATCGTGGCGGGCTGC
CTGCGCACGCAAGCCAGCCGCAACTGGGAGCAAAAACGGCTGCGGTTAGCCCTCGACCAACAGCGCCAACTGGTGCTGCG
CAGCGGCAACCCAGCTGTCGAAGAGCGGCGGCTGCAGCAATGGCGCCAGCAGATTCAACGCCAAGCCATGGAGGCCTACC
AGCGCGGCGAGGCCCGCCAGGCCATGGCCCTGCTCACCAGCAGTGGCGAAACCCGCTTCCCCGATGGGCAGCAGCTCCAC
GCCACGCTGGAGGACCACTGGGCTGCCAACCGCTACGCCTACAGCCAAGCCGCAAGTGCCGCTGCTGGAGAGGATTGGTG
GGAAGCCTTGGATCAGCTCAATCAGCTGAACCACCCCTGGTGGCAGCGCAAAGCCTTGAGCCTGCGCACCGACGTCAGTC
GTCAAGCCGCAGCGATGCAGCGCAGCAATCAACCCAAAGACAGCCACCGCGACAGCGGCGACCAACCAATCTCCGACAGC
GAACTCGATGCCGCCGTGCAGCGCCACCTCTCGCTGGGGTTAAGCGCCTGGCAGGCATTCGAACTGGGCTGCAGCGAACT
CGGCGGGCAGGTCTTGGAACAGGGGCCGGAGAGCAGCTGCCAACGTTGA

Upstream 100 bases:

>100_bases
GGCTGCGCTTCGGGGTCGACGCCGAACGGCAGCTTTGGCTGGAGGGGTTTGATCTTGTTGGCGAGCAACGACTCTCCCGC
CAAATCCTCGGCATTGTGGA

Downstream 100 bases:

>100_bases
GTGACAGGATGTGTTGGCTTGAGAGCCGCAGCCATGCAGCAGGGTGACCGTGTCCGGGTAAAGGAGTCTGTGGTGGTGTT
CACCCATCCAGAACATCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MTCPPPVSPRRSRLPKVWIWSSISLVGAVALSLGWWQSQLPARLAQAVDNDQLDTCLRLGEQLAALRKLNSEEQAIVAGC
LRTQASRNWEQKRLRLALDQQRQLVLRSGNPAVEERRLQQWRQQIQRQAMEAYQRGEARQAMALLTSSGETRFPDGQQLH
ATLEDHWAANRYAYSQAASAAAGEDWWEALDQLNQLNHPWWQRKALSLRTDVSRQAAAMQRSNQPKDSHRDSGDQPISDS
ELDAAVQRHLSLGLSAWQAFELGCSELGGQVLEQGPESSCQR

Sequences:

>Translated_282_residues
MTCPPPVSPRRSRLPKVWIWSSISLVGAVALSLGWWQSQLPARLAQAVDNDQLDTCLRLGEQLAALRKLNSEEQAIVAGC
LRTQASRNWEQKRLRLALDQQRQLVLRSGNPAVEERRLQQWRQQIQRQAMEAYQRGEARQAMALLTSSGETRFPDGQQLH
ATLEDHWAANRYAYSQAASAAAGEDWWEALDQLNQLNHPWWQRKALSLRTDVSRQAAAMQRSNQPKDSHRDSGDQPISDS
ELDAAVQRHLSLGLSAWQAFELGCSELGGQVLEQGPESSCQR
>Mature_281_residues
TCPPPVSPRRSRLPKVWIWSSISLVGAVALSLGWWQSQLPARLAQAVDNDQLDTCLRLGEQLAALRKLNSEEQAIVAGCL
RTQASRNWEQKRLRLALDQQRQLVLRSGNPAVEERRLQQWRQQIQRQAMEAYQRGEARQAMALLTSSGETRFPDGQQLHA
TLEDHWAANRYAYSQAASAAAGEDWWEALDQLNQLNHPWWQRKALSLRTDVSRQAAAMQRSNQPKDSHRDSGDQPISDSE
LDAAVQRHLSLGLSAWQAFELGCSELGGQVLEQGPESSCQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31794; Mature: 31663

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTCPPPVSPRRSRLPKVWIWSSISLVGAVALSLGWWQSQLPARLAQAVDNDQLDTCLRLG
CCCCCCCCCHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
EQLAALRKLNSEEQAIVAGCLRTQASRNWEQKRLRLALDQQRQLVLRSGNPAVEERRLQQ
HHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
WRQQIQRQAMEAYQRGEARQAMALLTSSGETRFPDGQQLHATLEDHWAANRYAYSQAASA
HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AAGEDWWEALDQLNQLNHPWWQRKALSLRTDVSRQAAAMQRSNQPKDSHRDSGDQPISDS
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCHH
ELDAAVQRHLSLGLSAWQAFELGCSELGGQVLEQGPESSCQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCC
>Mature Secondary Structure 
TCPPPVSPRRSRLPKVWIWSSISLVGAVALSLGWWQSQLPARLAQAVDNDQLDTCLRLG
CCCCCCCCHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
EQLAALRKLNSEEQAIVAGCLRTQASRNWEQKRLRLALDQQRQLVLRSGNPAVEERRLQQ
HHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
WRQQIQRQAMEAYQRGEARQAMALLTSSGETRFPDGQQLHATLEDHWAANRYAYSQAASA
HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AAGEDWWEALDQLNQLNHPWWQRKALSLRTDVSRQAAAMQRSNQPKDSHRDSGDQPISDS
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCHH
ELDAAVQRHLSLGLSAWQAFELGCSELGGQVLEQGPESSCQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA