| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is dnaK [H]
Identifier: 148242952
GI number: 148242952
Start: 1612683
End: 1614257
Strand: Direct
Name: dnaK [H]
Synonym: SynRCC307_1853
Alternate gene names: 148242952
Gene position: 1612683-1614257 (Clockwise)
Preceding gene: 148242948
Following gene: 148242953
Centisome position: 72.48
GC content: 65.33
Gene sequence:
>1575_bases GTGTGGATGGCCGTACTTTCTGCAATGGTTTCAGCATTCAGGAAAGGATTTGCCTTGAGCCAGGGGAGCCTTGCGATCGA CTTGGGCAGCTCAAGCACCCTGGTGGGCTGGCAAGCCGCACCTGGCAGCCCTGGGGAAGTGCTGGCTTTAGCGCCCCTCA GCCGCTCCACAAGCGATGCCAGCATTCCCAGCCTGGTCAGCCCCAGCGGCGGCAGCCGTTGGCTGTTGGGGCAGCAAGTG ATCGAAGCCGGCAGCGAAGCCGAGTGCCTGCGGGATTTCAAAGCGCTGCTCGGGCAAAGCAATGCTCCAACCGCAGCTGA GCAGGCTGCTGAGGCCTTGCTTCAAGGCATTTGGCAACGGCTGCCGCAGGCCATCCAGCCCCAACGGCTGGTGCTCACCG CGCCGGTCCAGGGCTTCGCGGGGTATCGGCGCTGGCTGCAGCGGTGGGCCGAGTCCCTCGCCATTGATGAAGTGGCCCTG GTGGATGAACCCACAGCAGCTGCCCTTGGCGCAGGCCTATCGCCTGGAAGCCTGGTGCTGGTGCTCGATATCGGCGCCGG CACCACCGATCTGGCGCTGGTCAGGCTGGAGGGGGGCGAAGGCCGTGCCATGCCCATGGCCCAACTGCTGCGCTTTGCGG GCCGCTCTCTAGCGGAACGTCCAGGACAACAACAGCGCACCGCCAAGGTGCTGGGCAAAGCGGGAATCAGCCTGGGGGGG CGCATGATCGATCGCTGGTGGGCCAAAGCTTTAGGAGCCCCTGAGCCAGCTCCGCAGGCCTGGTTGAACGCTGCTGAGGC ACTCAAATGCGCCTTAAGCGAAACCACCAGCGCTCAAGTGGTGCTGGAAAGCGAGGCAGGGCCCCGGCCGTTGCAAGGAA GCCGGCGGGAGCTCAACAACGTGCTGGACGCCGCCGGCTTGGAGCCGCTCTTGGATGGCCTGCTCAATAAAGTGGAGGCT GCGGCCCGGCGGGCCGGCGAATCCCTCGATTCCATCGATGCGGTGATGGCCGTCGGTGGCGGCAGCGCACTGCCCTGGGT GCAGCAGTGGCTGCAGCGCCGCTTGCCGAAAACAGAGCTCCTGGTCACCCAACCCCTGCAAGCGGTGGTGCTCGGCGCCT TGGCCATGACTCCAGCTCTGCAGGTGATGGATGTGTTGCAACACGGCATCAGCCTGCGCTGCTGGGACCGGAGGCTGCAG AACCAGCGCTGGCATCCCCTGTTTTTACCCGGGCAAGCCTGGCCAACCCCGCAACCCCTGGAGCTGGTTTTAGCCAGCCG CGGTGATCAAGCCTGCGTTGAGGTGCAACTGGGCACCCCGAGCGGTGAATCCAGGGCCGAGGTGGTGTTTGTCGATGGTC TGCCGGTGCTCCGCAGTCAGGAGGCCGGCGAGGCCAGCGTGCGGCCCTGGAACCAACCGGCGTTGGAGATCCCTCTGCCA GCGGGCGCTCAAGAAGGCCAAGACTGCCTGCGGCTGCGCTTCGGGGTCGACGCCGAACGGCAGCTTTGGCTGGAGGGGTT TGATCTTGTTGGCGAGCAACGACTCTCCCGCCAAATCCTCGGCATTGTGGAGTGA
Upstream 100 bases:
>100_bases TCTTCGGTCTCCTCCCGATAAAACGAGAGCACAGCCCGCAACAACCGCTCGCCAGCCATCTCATACCCGGACTCATTGAT CTCAATGTGAACCGCGCTGG
Downstream 100 bases:
>100_bases CTTGCCCTCCCCCGGTGTCGCCGCGCCGCTCGCGACTACCCAAGGTTTGGATCTGGAGCTCCATCAGCCTGGTGGGGGCC GTGGCGCTGTCGTTGGGCTG
Product: molecular chaperone DnaK
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 524; Mature: 524
Protein sequence:
>524_residues MWMAVLSAMVSAFRKGFALSQGSLAIDLGSSSTLVGWQAAPGSPGEVLALAPLSRSTSDASIPSLVSPSGGSRWLLGQQV IEAGSEAECLRDFKALLGQSNAPTAAEQAAEALLQGIWQRLPQAIQPQRLVLTAPVQGFAGYRRWLQRWAESLAIDEVAL VDEPTAAALGAGLSPGSLVLVLDIGAGTTDLALVRLEGGEGRAMPMAQLLRFAGRSLAERPGQQQRTAKVLGKAGISLGG RMIDRWWAKALGAPEPAPQAWLNAAEALKCALSETTSAQVVLESEAGPRPLQGSRRELNNVLDAAGLEPLLDGLLNKVEA AARRAGESLDSIDAVMAVGGGSALPWVQQWLQRRLPKTELLVTQPLQAVVLGALAMTPALQVMDVLQHGISLRCWDRRLQ NQRWHPLFLPGQAWPTPQPLELVLASRGDQACVEVQLGTPSGESRAEVVFVDGLPVLRSQEAGEASVRPWNQPALEIPLP AGAQEGQDCLRLRFGVDAERQLWLEGFDLVGEQRLSRQILGIVE
Sequences:
>Translated_524_residues MWMAVLSAMVSAFRKGFALSQGSLAIDLGSSSTLVGWQAAPGSPGEVLALAPLSRSTSDASIPSLVSPSGGSRWLLGQQV IEAGSEAECLRDFKALLGQSNAPTAAEQAAEALLQGIWQRLPQAIQPQRLVLTAPVQGFAGYRRWLQRWAESLAIDEVAL VDEPTAAALGAGLSPGSLVLVLDIGAGTTDLALVRLEGGEGRAMPMAQLLRFAGRSLAERPGQQQRTAKVLGKAGISLGG RMIDRWWAKALGAPEPAPQAWLNAAEALKCALSETTSAQVVLESEAGPRPLQGSRRELNNVLDAAGLEPLLDGLLNKVEA AARRAGESLDSIDAVMAVGGGSALPWVQQWLQRRLPKTELLVTQPLQAVVLGALAMTPALQVMDVLQHGISLRCWDRRLQ NQRWHPLFLPGQAWPTPQPLELVLASRGDQACVEVQLGTPSGESRAEVVFVDGLPVLRSQEAGEASVRPWNQPALEIPLP AGAQEGQDCLRLRFGVDAERQLWLEGFDLVGEQRLSRQILGIVE >Mature_524_residues MWMAVLSAMVSAFRKGFALSQGSLAIDLGSSSTLVGWQAAPGSPGEVLALAPLSRSTSDASIPSLVSPSGGSRWLLGQQV IEAGSEAECLRDFKALLGQSNAPTAAEQAAEALLQGIWQRLPQAIQPQRLVLTAPVQGFAGYRRWLQRWAESLAIDEVAL VDEPTAAALGAGLSPGSLVLVLDIGAGTTDLALVRLEGGEGRAMPMAQLLRFAGRSLAERPGQQQRTAKVLGKAGISLGG RMIDRWWAKALGAPEPAPQAWLNAAEALKCALSETTSAQVVLESEAGPRPLQGSRRELNNVLDAAGLEPLLDGLLNKVEA AARRAGESLDSIDAVMAVGGGSALPWVQQWLQRRLPKTELLVTQPLQAVVLGALAMTPALQVMDVLQHGISLRCWDRRLQ NQRWHPLFLPGQAWPTPQPLELVLASRGDQACVEVQLGTPSGESRAEVVFVDGLPVLRSQEAGEASVRPWNQPALEIPLP AGAQEGQDCLRLRFGVDAERQLWLEGFDLVGEQRLSRQILGIVE
Specific function: Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by hscB [H]
COG id: COG0443
COG function: function code O; Molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 70 family [H]
Homologues:
None
Paralogues:
None
Copy number: 1300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 320 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 500 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stati
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018181 - InterPro: IPR001023 - InterPro: IPR013126 - InterPro: IPR010236 [H]
Pfam domain/function: PF00012 HSP70 [H]
EC number: NA
Molecular weight: Translated: 55837; Mature: 55837
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWMAVLSAMVSAFRKGFALSQGSLAIDLGSSSTLVGWQAAPGSPGEVLALAPLSRSTSDA CHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEECCCCCCCCEEEEECCCCCCCCC SIPSLVSPSGGSRWLLGQQVIEAGSEAECLRDFKALLGQSNAPTAAEQAAEALLQGIWQR CCCCCCCCCCCCEEHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LPQAIQPQRLVLTAPVQGFAGYRRWLQRWAESLAIDEVALVDEPTAAALGAGLSPGSLVL HHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCEEE VLDIGAGTTDLALVRLEGGEGRAMPMAQLLRFAGRSLAERPGQQQRTAKVLGKAGISLGG EEECCCCCCEEEEEEEECCCCCCCHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHCHHHHH RMIDRWWAKALGAPEPAPQAWLNAAEALKCALSETTSAQVVLESEAGPRPLQGSRRELNN HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHH VLDAAGLEPLLDGLLNKVEAAARRAGESLDSIDAVMAVGGGSALPWVQQWLQRRLPKTEL HHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHH LVTQPLQAVVLGALAMTPALQVMDVLQHGISLRCWDRRLQNQRWHPLFLPGQAWPTPQPL HHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHCCCCCCEEEECCCCCCCCCHH ELVLASRGDQACVEVQLGTPSGESRAEVVFVDGLPVLRSQEAGEASVRPWNQPALEIPLP HHHHHCCCCCEEEEEEECCCCCCCCEEEEEECCCCHHCCCCCCCCCCCCCCCCCEEECCC AGAQEGQDCLRLRFGVDAERQLWLEGFDLVGEQRLSRQILGIVE CCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MWMAVLSAMVSAFRKGFALSQGSLAIDLGSSSTLVGWQAAPGSPGEVLALAPLSRSTSDA CHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEECCCCCCCCEEEEECCCCCCCCC SIPSLVSPSGGSRWLLGQQVIEAGSEAECLRDFKALLGQSNAPTAAEQAAEALLQGIWQR CCCCCCCCCCCCEEHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LPQAIQPQRLVLTAPVQGFAGYRRWLQRWAESLAIDEVALVDEPTAAALGAGLSPGSLVL HHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCEEE VLDIGAGTTDLALVRLEGGEGRAMPMAQLLRFAGRSLAERPGQQQRTAKVLGKAGISLGG EEECCCCCCEEEEEEEECCCCCCCHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHCHHHHH RMIDRWWAKALGAPEPAPQAWLNAAEALKCALSETTSAQVVLESEAGPRPLQGSRRELNN HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHH VLDAAGLEPLLDGLLNKVEAAARRAGESLDSIDAVMAVGGGSALPWVQQWLQRRLPKTEL HHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHH LVTQPLQAVVLGALAMTPALQVMDVLQHGISLRCWDRRLQNQRWHPLFLPGQAWPTPQPL HHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHCCCCCCEEEECCCCCCCCCHH ELVLASRGDQACVEVQLGTPSGESRAEVVFVDGLPVLRSQEAGEASVRPWNQPALEIPLP HHHHHCCCCCEEEEEEECCCCCCCCEEEEEECCCCHHCCCCCCCCCCCCCCCCCEEECCC AGAQEGQDCLRLRFGVDAERQLWLEGFDLVGEQRLSRQILGIVE CCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA