Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148242864

Identifier: 148242864

GI number: 148242864

Start: 1543283

End: 1543693

Strand: Direct

Name: 148242864

Synonym: SynRCC307_1765

Alternate gene names: NA

Gene position: 1543283-1543693 (Clockwise)

Preceding gene: 148242862

Following gene: 148242868

Centisome position: 69.36

GC content: 55.72

Gene sequence:

>411_bases
GTGCAGACATTGTTCTTTCTCTCGGCTGACCTTGATCTACGCCGAAAGCAATCCCGAGTCGATACCTCAAACCGCACAAC
GGGTGTTCGGTTTTGCGCTCTCTTGATCAGGTTGATCACGGCAGTCGCGCCGATTGCGCAAGCTCACACATCGGGTGGCA
CGTCCAAGCACTTCAGGGTTTCCTGTGGCGGTTGTTGGAGAGCTATGACGAAATTCCTGCTGCGCGATGGAAGCCTGATC
GATATCGACATCGAAGCGGCCTCAGAAGACGTTTTCAGCTACAACACCACTGACGGAACAACCGTTCACGCCGCCCTCTC
TGAGCAGGCTGAGATGGAGCTACTACGCCAAGTCCCACCAAAACTGCTGAGCGTTTCCCAACGGATGCTGCTGAGCGATC
TGGCCGCCTGA

Upstream 100 bases:

>100_bases
GGAATAACGCTTCAAGCGCCAGCCAGTTGACGGCGGGCCATCAGGTTACGAGCAGCCTCCAGATTGATGGCTTTCTTAGC
GCGCTTGCGGATCAGTTTGA

Downstream 100 bases:

>100_bases
GGTCCCTAAGAGCTTGGAAGCCAGTCGTTCAGTCCTCGGAAGCAGGCTCGGTTATTTCATGGCCTAACACCGCATCAGCA
ACGCTGGCTGCCACCTGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MQTLFFLSADLDLRRKQSRVDTSNRTTGVRFCALLIRLITAVAPIAQAHTSGGTSKHFRVSCGGCWRAMTKFLLRDGSLI
DIDIEAASEDVFSYNTTDGTTVHAALSEQAEMELLRQVPPKLLSVSQRMLLSDLAA

Sequences:

>Translated_136_residues
MQTLFFLSADLDLRRKQSRVDTSNRTTGVRFCALLIRLITAVAPIAQAHTSGGTSKHFRVSCGGCWRAMTKFLLRDGSLI
DIDIEAASEDVFSYNTTDGTTVHAALSEQAEMELLRQVPPKLLSVSQRMLLSDLAA
>Mature_136_residues
MQTLFFLSADLDLRRKQSRVDTSNRTTGVRFCALLIRLITAVAPIAQAHTSGGTSKHFRVSCGGCWRAMTKFLLRDGSLI
DIDIEAASEDVFSYNTTDGTTVHAALSEQAEMELLRQVPPKLLSVSQRMLLSDLAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14945; Mature: 14945

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTLFFLSADLDLRRKQSRVDTSNRTTGVRFCALLIRLITAVAPIAQAHTSGGTSKHFRV
CCEEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
SCGGCWRAMTKFLLRDGSLIDIDIEAASEDVFSYNTTDGTTVHAALSEQAEMELLRQVPP
ECCHHHHHHHHHHHCCCCEEEEECCCCCCCCEEECCCCCCEEHHHHHHHHHHHHHHHCCH
KLLSVSQRMLLSDLAA
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQTLFFLSADLDLRRKQSRVDTSNRTTGVRFCALLIRLITAVAPIAQAHTSGGTSKHFRV
CCEEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
SCGGCWRAMTKFLLRDGSLIDIDIEAASEDVFSYNTTDGTTVHAALSEQAEMELLRQVPP
ECCHHHHHHHHHHHCCCCEEEEECCCCCCCCEEECCCCCCEEHHHHHHHHHHHHHHHCCH
KLLSVSQRMLLSDLAA
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA