| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242868
Identifier: 148242868
GI number: 148242868
Start: 1544984
End: 1545337
Strand: Direct
Name: 148242868
Synonym: SynRCC307_1769
Alternate gene names: NA
Gene position: 1544984-1545337 (Clockwise)
Preceding gene: 148242864
Following gene: 148242869
Centisome position: 69.44
GC content: 60.45
Gene sequence:
>354_bases TTGCGCTCTAAATCAATCAAGATGGCCGCAAGAGCAACGCCTATTGCCATGCCCAGCCGCGAACAGATTTTGGCCGCCTC CGCTGGCTGGGTGGCGGTGCTTCTCAATGTGATCCCCGGTTTAGGGGCGGGCTATCTCTACCAGCGCCGTTGGAAGGCCT ATTGGATCACCTCCGCTTTGGCGACCGCCTGGTTTGTTGCCGGCGCAGTGCTGGGGCAAGACGCTGAACCAGCCGCTGAA GCTCAGAACCAATTGGTGGGCCTGATCGGCTTGCTGCTACTGGCAGGAGGCACTGCCACCGAAGCAGGCCTGGCCGTGAA GAAAGTGCGTGAGCCGTTGGACGAAAGCGCTTGA
Upstream 100 bases:
>100_bases GCCACCCACCAGGCCATCAACAATTCACTGTTGCCAAGACGCTAACGACGCCGAATCGGCAACGGGGCTCGGCAACGGTC ACGACAAAGGCCAGATCGAG
Downstream 100 bases:
>100_bases TTCGATCAACTCGCAAAACGCCGACGTCATCGCCGCAGGCTTCAACGCTCCAATGGACTTGATCTCGACATAGGCGCACG GCTCAGAGCTGACGGTCTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MRSKSIKMAARATPIAMPSREQILAASAGWVAVLLNVIPGLGAGYLYQRRWKAYWITSALATAWFVAGAVLGQDAEPAAE AQNQLVGLIGLLLLAGGTATEAGLAVKKVREPLDESA
Sequences:
>Translated_117_residues MRSKSIKMAARATPIAMPSREQILAASAGWVAVLLNVIPGLGAGYLYQRRWKAYWITSALATAWFVAGAVLGQDAEPAAE AQNQLVGLIGLLLLAGGTATEAGLAVKKVREPLDESA >Mature_117_residues MRSKSIKMAARATPIAMPSREQILAASAGWVAVLLNVIPGLGAGYLYQRRWKAYWITSALATAWFVAGAVLGQDAEPAAE AQNQLVGLIGLLLLAGGTATEAGLAVKKVREPLDESA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12261; Mature: 12261
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSKSIKMAARATPIAMPSREQILAASAGWVAVLLNVIPGLGAGYLYQRRWKAYWITSAL CCCCCHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH ATAWFVAGAVLGQDAEPAAEAQNQLVGLIGLLLLAGGTATEAGLAVKKVREPLDESA HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRSKSIKMAARATPIAMPSREQILAASAGWVAVLLNVIPGLGAGYLYQRRWKAYWITSAL CCCCCHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH ATAWFVAGAVLGQDAEPAAEAQNQLVGLIGLLLLAGGTATEAGLAVKKVREPLDESA HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA