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The map label for this gene is des [H]

Identifier: 148242856

GI number: 148242856

Start: 1538507

End: 1539562

Strand: Direct

Name: des [H]

Synonym: SynRCC307_1757

Alternate gene names: 148242856

Gene position: 1538507-1539562 (Clockwise)

Preceding gene: 148242855

Following gene: 148242857

Centisome position: 69.15

GC content: 47.82

Gene sequence:

>1056_bases
ATGAAGAGCGATGATCGCATCGCCCTTTGGCAAATCATCAGCACGGTTCTTCCCATTGTTGCTATTTCAATAGGCCTAGG
CGTAGCAACACAATCTCTAAGCCCACAGACATTGGCAATTTCTGCCGCGCTGTTCGCGCTGCTTGTTCTTTTCTTGAGCC
GCAGCTTTTCGCTGATGCATGATTGCGGCCATCAGAGCTTATTTCGAAGCAAGAACGCAAATCGTATGGCGGCATTTTTG
CTTAGCTTGATTCATGGGATGCCTCATCATCCATGGTCACGCGGGCATGCTTTTCATCACAAACACAATGGCAATTGGGA
CCGTTACAGAGGCCCCTCAGCCCTGATCACTAGTCAGGAGTTCGATCAAAAAACAGACTCCTCAAAGCGCTTATACAAGA
TTCTCCGTCATCCACTGCTTCTGTTTCCCGGCGGGTTTTTCTACTTGATTATCAAACCAAGAGCCACTCTTTTGCTCGGC
TTTTTCGAATTTGCATTGCATTCAATCAGCGCTTGCTTTAAAAGCATATTTGCTGGAAAACTCCCCGACATCGGCAAAAT
CGCCGCAGGCCACAAATCAAACTTCTTTTACACCAAAGGAGAAGCCATTGACACCACGATCAACACAATTTGCGTTGCTT
TGCTTTGGTGGTGGGCTGGAAGTTCAATCGGATACGTCCATTTCTGGACTCTCTACTTCTTGGTGATGAGCACAAGTGCT
GCATTAATGATTGCCGTTTTCTTCATTCAGCACAACTTTCCAGGGTCTTACACAAGTAATGAAGAAGACTGGAGTTACTT
CAAGGGAGCTCTCGAAGGTTCATCCTTCCTAATGATGCCTGCAATTCTGAACTGGTTCACGGCCGACATTGCTTATCACC
ATATTCATCACCTCTCCGAGAGAATTCCCAATTACCGGCTCAGTCAGTGCCATCAGGCCAATAGTCATTTGCTCGGTGGT
GTTCGGCGCCTTCGCCTCTCTGAGGTTTCGACCTGCTTCTCCCTCATTCTTTGGGATCGAGACAAGCTGGAGCTCACGAC
CACAACGGCTGCTTGA

Upstream 100 bases:

>100_bases
GGCCTCACCCATGAGGCTTTGAAGACCCTTGAATACAACTACAACAACGCTGCAAGCAACACAATCTCCCAGGCGAATTG
ATTTCGAGTTAGCAGCTTAT

Downstream 100 bases:

>100_bases
AATGCAGGTTTTTTCTCGTAGTGTCAGCTGCTTGGAGAAATCCGCATGAGCTATTCCCGTACGAAAGTTTGGGTGTGGTT
CAAAGGGGGCCTAGACGGCG

Product: Fatty acid desaturase

Products: NA

Alternate protein names: Delta(5) acyl-lipid desaturase; Delta(5) desaturase [H]

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MKSDDRIALWQIISTVLPIVAISIGLGVATQSLSPQTLAISAALFALLVLFLSRSFSLMHDCGHQSLFRSKNANRMAAFL
LSLIHGMPHHPWSRGHAFHHKHNGNWDRYRGPSALITSQEFDQKTDSSKRLYKILRHPLLLFPGGFFYLIIKPRATLLLG
FFEFALHSISACFKSIFAGKLPDIGKIAAGHKSNFFYTKGEAIDTTINTICVALLWWWAGSSIGYVHFWTLYFLVMSTSA
ALMIAVFFIQHNFPGSYTSNEEDWSYFKGALEGSSFLMMPAILNWFTADIAYHHIHHLSERIPNYRLSQCHQANSHLLGG
VRRLRLSEVSTCFSLILWDRDKLELTTTTAA

Sequences:

>Translated_351_residues
MKSDDRIALWQIISTVLPIVAISIGLGVATQSLSPQTLAISAALFALLVLFLSRSFSLMHDCGHQSLFRSKNANRMAAFL
LSLIHGMPHHPWSRGHAFHHKHNGNWDRYRGPSALITSQEFDQKTDSSKRLYKILRHPLLLFPGGFFYLIIKPRATLLLG
FFEFALHSISACFKSIFAGKLPDIGKIAAGHKSNFFYTKGEAIDTTINTICVALLWWWAGSSIGYVHFWTLYFLVMSTSA
ALMIAVFFIQHNFPGSYTSNEEDWSYFKGALEGSSFLMMPAILNWFTADIAYHHIHHLSERIPNYRLSQCHQANSHLLGG
VRRLRLSEVSTCFSLILWDRDKLELTTTTAA
>Mature_351_residues
MKSDDRIALWQIISTVLPIVAISIGLGVATQSLSPQTLAISAALFALLVLFLSRSFSLMHDCGHQSLFRSKNANRMAAFL
LSLIHGMPHHPWSRGHAFHHKHNGNWDRYRGPSALITSQEFDQKTDSSKRLYKILRHPLLLFPGGFFYLIIKPRATLLLG
FFEFALHSISACFKSIFAGKLPDIGKIAAGHKSNFFYTKGEAIDTTINTICVALLWWWAGSSIGYVHFWTLYFLVMSTSA
ALMIAVFFIQHNFPGSYTSNEEDWSYFKGALEGSSFLMMPAILNWFTADIAYHHIHHLSERIPNYRLSQCHQANSHLLGG
VRRLRLSEVSTCFSLILWDRDKLELTTTTAA

Specific function: Catalyzes the introduction of a cis-double bond at the delta(5) position of existing saturated fatty acids attached to membrane phospholipids. It is not strictly specific for palmitic acid (C16) but can also accept C14 as well as C18 species to yield unsa

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fatty acid desaturase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005804 [H]

Pfam domain/function: PF00487 FA_desaturase [H]

EC number: 1.14.99.-

Molecular weight: Translated: 39653; Mature: 39653

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSDDRIALWQIISTVLPIVAISIGLGVATQSLSPQTLAISAALFALLVLFLSRSFSLMH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHH
DCGHQSLFRSKNANRMAAFLLSLIHGMPHHPWSRGHAFHHKHNGNWDRYRGPSALITSQE
HCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCEECCHH
FDQKTDSSKRLYKILRHPLLLFPGGFFYLIIKPRATLLLGFFEFALHSISACFKSIFAGK
HHCCCCHHHHHHHHHHCCCEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCC
LPDIGKIAAGHKSNFFYTKGEAIDTTINTICVALLWWWAGSSIGYVHFWTLYFLVMSTSA
CCCCHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
ALMIAVFFIQHNFPGSYTSNEEDWSYFKGALEGSSFLMMPAILNWFTADIAYHHIHHLSE
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHH
RIPNYRLSQCHQANSHLLGGVRRLRLSEVSTCFSLILWDRDKLELTTTTAA
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC
>Mature Secondary Structure
MKSDDRIALWQIISTVLPIVAISIGLGVATQSLSPQTLAISAALFALLVLFLSRSFSLMH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHH
DCGHQSLFRSKNANRMAAFLLSLIHGMPHHPWSRGHAFHHKHNGNWDRYRGPSALITSQE
HCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCEECCHH
FDQKTDSSKRLYKILRHPLLLFPGGFFYLIIKPRATLLLGFFEFALHSISACFKSIFAGK
HHCCCCHHHHHHHHHHCCCEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCC
LPDIGKIAAGHKSNFFYTKGEAIDTTINTICVALLWWWAGSSIGYVHFWTLYFLVMSTSA
CCCCHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
ALMIAVFFIQHNFPGSYTSNEEDWSYFKGALEGSSFLMMPAILNWFTADIAYHHIHHLSE
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHH
RIPNYRLSQCHQANSHLLGGVRRLRLSEVSTCFSLILWDRDKLELTTTTAA
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9555904; 9384377 [H]