| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242831
Identifier: 148242831
GI number: 148242831
Start: 1516258
End: 1517052
Strand: Direct
Name: 148242831
Synonym: SynRCC307_1732
Alternate gene names: NA
Gene position: 1516258-1517052 (Clockwise)
Preceding gene: 148242830
Following gene: 148242832
Centisome position: 68.15
GC content: 66.67
Gene sequence:
>795_bases ATGACCTATGTGCTCGGCACCCATAGCGCTGAGCTCCAGCGGCTCGGCCGCCAGCACCGCTTTTGGCGCCAGGAATGCCG CAGCGGGTTGCAGCGCGCTGGCTTTGGCGCTGGCGATCGGCTCTTGGATCTCGGCTGCGGGCCGGGATTTTGCAGCCTTG AACTCGCTGAGCTGGTGGGCCCCAGCGGCCAGGTGCTGGGGCTGGATCTTTCGCCGAACTACATCGAGCATCTCCAGCAG CTGGCCCATCAGCAGAACTTGAGCCAACTGCGCGGCATCGCCACCGATCTGGCCGAACCGCAACAGCTGCCGGAGGCTGG CCACTGGGATGGGGCCTGGTGCCGCTGGCTGTGGATGTTTTTGCCCAAGCTCGAGCCCCTGCTCGATGGCCTCGGCTCAG CGCTGCGCCCCGGCGGGCGGCTAGTGCTGCAGGAATACATCCGCTGGGACAGCTTTTCGCTGCGCCCTGGCGGCAGCGCC CTGGCGGAGTTCGTTGCCACCTGCATCCGCCACTGGCGCGATCAAGGCGGCGATCCCGATGTGGCCAGCCGGCTGCCGGA GCTGCTTAGTCAGCGCGGCTGGCGGCTGGTGAGCTGCCGCAGCCTGCTGGATTGCTCCACCAGCAGCGAAGCCAAAGCCC TGTGGCTGCAGGACTTTCTCTCCAGCTATCCGCAGCAGCTGCAACAACTTGGCCTGTGGAGCGACCAGCAGCAGCAGCGG CTGGAGGCCGAGCAAGCCAGCGCCATGCTGTGGATGACGCCAACGCTGGTGGAGCAGATCTGGGAGCGGCCATGA
Upstream 100 bases:
>100_bases CCGAGGAGGCGTTCAACGCGCAACTGCGCGATTGCCTCGGCGTCAACGCCGAGGCACCTCTCCCGCTGCAGCGAACTGGA GCGCTCAAGCCGCTGCAGCC
Downstream 100 bases:
>100_bases GTGAGCACCGCCTGGATCTTGAGCGGCGCCAGCGCCTCGGGCTAGTGGAGGCGATCTGGGGTGAGCACAAAAGCGCCGAG CAGATCATCGCCATCGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Menaquinone Biosynthesis Methyltransferase UbiE; MCP Methyltransferase CheR-Type; UbiE/COQ5 Methyltransferase Familiy Protein; Methylase Involved In Ubiquinone/Menaquinone Biosynthesis; Methyltransferase Domain Family
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MTYVLGTHSAELQRLGRQHRFWRQECRSGLQRAGFGAGDRLLDLGCGPGFCSLELAELVGPSGQVLGLDLSPNYIEHLQQ LAHQQNLSQLRGIATDLAEPQQLPEAGHWDGAWCRWLWMFLPKLEPLLDGLGSALRPGGRLVLQEYIRWDSFSLRPGGSA LAEFVATCIRHWRDQGGDPDVASRLPELLSQRGWRLVSCRSLLDCSTSSEAKALWLQDFLSSYPQQLQQLGLWSDQQQQR LEAEQASAMLWMTPTLVEQIWERP
Sequences:
>Translated_264_residues MTYVLGTHSAELQRLGRQHRFWRQECRSGLQRAGFGAGDRLLDLGCGPGFCSLELAELVGPSGQVLGLDLSPNYIEHLQQ LAHQQNLSQLRGIATDLAEPQQLPEAGHWDGAWCRWLWMFLPKLEPLLDGLGSALRPGGRLVLQEYIRWDSFSLRPGGSA LAEFVATCIRHWRDQGGDPDVASRLPELLSQRGWRLVSCRSLLDCSTSSEAKALWLQDFLSSYPQQLQQLGLWSDQQQQR LEAEQASAMLWMTPTLVEQIWERP >Mature_263_residues TYVLGTHSAELQRLGRQHRFWRQECRSGLQRAGFGAGDRLLDLGCGPGFCSLELAELVGPSGQVLGLDLSPNYIEHLQQL AHQQNLSQLRGIATDLAEPQQLPEAGHWDGAWCRWLWMFLPKLEPLLDGLGSALRPGGRLVLQEYIRWDSFSLRPGGSAL AEFVATCIRHWRDQGGDPDVASRLPELLSQRGWRLVSCRSLLDCSTSSEAKALWLQDFLSSYPQQLQQLGLWSDQQQQRL EAEQASAMLWMTPTLVEQIWERP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29787; Mature: 29656
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYVLGTHSAELQRLGRQHRFWRQECRSGLQRAGFGAGDRLLDLGCGPGFCSLELAELVG CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHC PSGQVLGLDLSPNYIEHLQQLAHQQNLSQLRGIATDLAEPQQLPEAGHWDGAWCRWLWMF CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHH LPKLEPLLDGLGSALRPGGRLVLQEYIRWDSFSLRPGGSALAEFVATCIRHWRDQGGDPD HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCH VASRLPELLSQRGWRLVSCRSLLDCSTSSEAKALWLQDFLSSYPQQLQQLGLWSDQQQQR HHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LEAEQASAMLWMTPTLVEQIWERP HHHHHHHHHHEECHHHHHHHHCCC >Mature Secondary Structure TYVLGTHSAELQRLGRQHRFWRQECRSGLQRAGFGAGDRLLDLGCGPGFCSLELAELVG EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHC PSGQVLGLDLSPNYIEHLQQLAHQQNLSQLRGIATDLAEPQQLPEAGHWDGAWCRWLWMF CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHH LPKLEPLLDGLGSALRPGGRLVLQEYIRWDSFSLRPGGSALAEFVATCIRHWRDQGGDPD HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCH VASRLPELLSQRGWRLVSCRSLLDCSTSSEAKALWLQDFLSSYPQQLQQLGLWSDQQQQR HHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LEAEQASAMLWMTPTLVEQIWERP HHHHHHHHHHEECHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA