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The map label for this gene is cpmA

Identifier: 148242832

GI number: 148242832

Start: 1517049

End: 1517696

Strand: Direct

Name: cpmA

Synonym: SynRCC307_1733

Alternate gene names: NA

Gene position: 1517049-1517696 (Clockwise)

Preceding gene: 148242831

Following gene: 148242833

Centisome position: 68.18

GC content: 67.28

Gene sequence:

>648_bases
ATGAGTGAGCACCGCCTGGATCTTGAGCGGCGCCAGCGCCTCGGGCTAGTGGAGGCGATCTGGGGTGAGCACAAAAGCGC
CGAGCAGATCATCGCCATCGCCCGCGACTTTCAAAGCGCCGGTGAACTCGCCCTGGTCACCCGCGTTGATGAGGCCAAAG
CCGCAGCCATCCAGGACTCAATCCCGGAGCTGGTGCACCACAGCCAAGCGCGCTGCCTCACCCTGGGCGAGCTGCCCAAA
GCCACCCAGCCAGCGGTGGGCTTGCTGTGCGGGGGAAGCAGTGATCTGCCCGTGCTCGCTGAAGCCGAGCTGGCCCTGCA
CTGCCATGGCATCGCCAGCCAGCGCTTTGCCGATGTGGGCGTGGCCGGGCTGCACCGGCTGCTCAAGGTGATCCCTGAGC
TCAATGAGCTGCAGCTTTTGATCGCCTTTGCCGGCATGGAAGGCGCCCTGCCCACCGTGCTGGCTGGCCTGGTGCCGCAA
CCGATCATCGGCGTGCCGGTGAGCGTGGGTTATGGCGTCAGCGCCGGCGGCCAAGCGGCCCTTAGCGGCATGCTCGCCAG
CTGCGCGCCTGGGCTCACGGTGGTCAACATCGACAACGGCTACGGCGCAGCGATGGCCGCGTTGCGGGTTCTGCGGGGCC
GTGGCTAA

Upstream 100 bases:

>100_bases
GCCTGTGGAGCGACCAGCAGCAGCAGCGGCTGGAGGCCGAGCAAGCCAGCGCCATGCTGTGGATGACGCCAACGCTGGTG
GAGCAGATCTGGGAGCGGCC

Downstream 100 bases:

>100_bases
GTCAAGGATTCCTGCAATCAACTCATGAGCGAAAGCGGCGGAGGCAAGTCCGGCGTCAACGTCGGCGCTGTGGTCGTGGT
GGTAATCGTGGTGGGCGTGA

Product: circadian phase modifier CpmA-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MSEHRLDLERRQRLGLVEAIWGEHKSAEQIIAIARDFQSAGELALVTRVDEAKAAAIQDSIPELVHHSQARCLTLGELPK
ATQPAVGLLCGGSSDLPVLAEAELALHCHGIASQRFADVGVAGLHRLLKVIPELNELQLLIAFAGMEGALPTVLAGLVPQ
PIIGVPVSVGYGVSAGGQAALSGMLASCAPGLTVVNIDNGYGAAMAALRVLRGRG

Sequences:

>Translated_215_residues
MSEHRLDLERRQRLGLVEAIWGEHKSAEQIIAIARDFQSAGELALVTRVDEAKAAAIQDSIPELVHHSQARCLTLGELPK
ATQPAVGLLCGGSSDLPVLAEAELALHCHGIASQRFADVGVAGLHRLLKVIPELNELQLLIAFAGMEGALPTVLAGLVPQ
PIIGVPVSVGYGVSAGGQAALSGMLASCAPGLTVVNIDNGYGAAMAALRVLRGRG
>Mature_214_residues
SEHRLDLERRQRLGLVEAIWGEHKSAEQIIAIARDFQSAGELALVTRVDEAKAAAIQDSIPELVHHSQARCLTLGELPKA
TQPAVGLLCGGSSDLPVLAEAELALHCHGIASQRFADVGVAGLHRLLKVIPELNELQLLIAFAGMEGALPTVLAGLVPQP
IIGVPVSVGYGVSAGGQAALSGMLASCAPGLTVVNIDNGYGAAMAALRVLRGRG

Specific function: Unknown

COG id: COG1691

COG function: function code R; NCAIR mutase (PurE)-related proteins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000031 [H]

Pfam domain/function: PF00731 AIRC [H]

EC number: NA

Molecular weight: Translated: 22309; Mature: 22178

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEHRLDLERRQRLGLVEAIWGEHKSAEQIIAIARDFQSAGELALVTRVDEAKAAAIQDS
CCCCCCCHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH
IPELVHHSQARCLTLGELPKATQPAVGLLCGGSSDLPVLAEAELALHCHGIASQRFADVG
HHHHHHCCCCCEEECCCCCCCCCCCEEEEECCCCCCCEEECCHHHEEECCHHHHHHHHHH
VAGLHRLLKVIPELNELQLLIAFAGMEGALPTVLAGLVPQPIIGVPVSVGYGVSAGGQAA
HHHHHHHHHHCCCCCHHEEEEEECCCCCCHHHHHHHHCCCCCCCCCEECCCCCCCCCHHH
LSGMLASCAPGLTVVNIDNGYGAAMAALRVLRGRG
HHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SEHRLDLERRQRLGLVEAIWGEHKSAEQIIAIARDFQSAGELALVTRVDEAKAAAIQDS
CCCCCCHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH
IPELVHHSQARCLTLGELPKATQPAVGLLCGGSSDLPVLAEAELALHCHGIASQRFADVG
HHHHHHCCCCCEEECCCCCCCCCCCEEEEECCCCCCCEEECCHHHEEECCHHHHHHHHHH
VAGLHRLLKVIPELNELQLLIAFAGMEGALPTVLAGLVPQPIIGVPVSVGYGVSAGGQAA
HHHHHHHHHHCCCCCHHEEEEEECCCCCCHHHHHHHHCCCCCCCCCEECCCCCCCCCHHH
LSGMLASCAPGLTVVNIDNGYGAAMAALRVLRGRG
HHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]