| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242825
Identifier: 148242825
GI number: 148242825
Start: 1512803
End: 1513258
Strand: Direct
Name: 148242825
Synonym: SynRCC307_1726
Alternate gene names: NA
Gene position: 1512803-1513258 (Clockwise)
Preceding gene: 148242824
Following gene: 148242826
Centisome position: 67.99
GC content: 63.38
Gene sequence:
>456_bases GTGACTGACGCCTTCCCACCCACCAGTGCTGCTGAGGTGCTCGCTCTCTGCGATGGCGCCTGGATGAGCCTGCGGTCTCA GCTGCAACCGGCCGATAGCGATGAGGGCTGGCACACCAGCGAAAAAGGCGAGCTCAAGCTGAGCTGGACCGCCTCAGAGA ACACCGATGAACTGGGTCGCATGGAGGCCACCCCGCCATCGGGGCAATCCACAGTTTTGACGTTTTGGGCGGATGGCCGC CTGGAAGGCAGCGGCGGCCAAAAGGGCCGCTGGGAGTTGCAGGTGGGCAGTCGTCTGGTGCTGATCCACAGCGATGGCGA GCTGCGCATCGAGGAATCGATCAGCTTCACCAAGCCCAACCTGCGGCTGCGCAACCTGCTGATCTGGAAAGGAGAGCAGC TGCAGGGTTCCCAGTTCTGCTCGGAAATCCGCCGCGTCAGCAAGCCCGCCTCGTGA
Upstream 100 bases:
>100_bases CCACCAAACCCGCCGACTGGCGCGCTTCCGGCGGCTTCACCTTCCAGTTCTGATCCCAGGCCACATCAAGCGGCAGGATG GTTGTTGGCCTGCTGCTGTT
Downstream 100 bases:
>100_bases GCAGCTTCCGGCTGGATGTGGTGAGCCTGGTGCCGGAGGTGTTCGACAGCCTTCGCGGCCTGGGGGTGATCGGTCGCGCC TTCCATGCCGGCATCGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MTDAFPPTSAAEVLALCDGAWMSLRSQLQPADSDEGWHTSEKGELKLSWTASENTDELGRMEATPPSGQSTVLTFWADGR LEGSGGQKGRWELQVGSRLVLIHSDGELRIEESISFTKPNLRLRNLLIWKGEQLQGSQFCSEIRRVSKPAS
Sequences:
>Translated_151_residues MTDAFPPTSAAEVLALCDGAWMSLRSQLQPADSDEGWHTSEKGELKLSWTASENTDELGRMEATPPSGQSTVLTFWADGR LEGSGGQKGRWELQVGSRLVLIHSDGELRIEESISFTKPNLRLRNLLIWKGEQLQGSQFCSEIRRVSKPAS >Mature_150_residues TDAFPPTSAAEVLALCDGAWMSLRSQLQPADSDEGWHTSEKGELKLSWTASENTDELGRMEATPPSGQSTVLTFWADGRL EGSGGQKGRWELQVGSRLVLIHSDGELRIEESISFTKPNLRLRNLLIWKGEQLQGSQFCSEIRRVSKPAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16675; Mature: 16544
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDAFPPTSAAEVLALCDGAWMSLRSQLQPADSDEGWHTSEKGELKLSWTASENTDELGR CCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHCC MEATPPSGQSTVLTFWADGRLEGSGGQKGRWELQVGSRLVLIHSDGELRIEESISFTKPN CCCCCCCCCCEEEEEEECCEEECCCCCCCEEEEEECCEEEEEECCCCEEEECCCEECCCC LRLRNLLIWKGEQLQGSQFCSEIRRVSKPAS EEEEEEEEECCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure TDAFPPTSAAEVLALCDGAWMSLRSQLQPADSDEGWHTSEKGELKLSWTASENTDELGR CCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHCC MEATPPSGQSTVLTFWADGRLEGSGGQKGRWELQVGSRLVLIHSDGELRIEESISFTKPN CCCCCCCCCCEEEEEEECCEEECCCCCCCEEEEEECCEEEEEECCCCEEEECCCEECCCC LRLRNLLIWKGEQLQGSQFCSEIRRVSKPAS EEEEEEEEECCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA