| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242721
Identifier: 148242721
GI number: 148242721
Start: 1423587
End: 1424528
Strand: Direct
Name: 148242721
Synonym: SynRCC307_1622
Alternate gene names: NA
Gene position: 1423587-1424528 (Clockwise)
Preceding gene: 148242720
Following gene: 148242722
Centisome position: 63.98
GC content: 57.32
Gene sequence:
>942_bases ATGGCCTGCGGATTGGGCCTTGCAGGGCCAACCACTCTTCAGGCGCATGCCCATGGTGATGGCGAAGGAGAGGAGCTCGA GCCTGGAGAATTCCGCGCCCGGCCGGTCATCACCATCGAAGGCCATGGCGGCTTTGAGAACAACCTGGAGGGGAGGCCTC AGCACTACGCCATCGATGGCCTGTTCGGCGGTGTCCTGGAATGGGGTCTAGAGAATGGCGGCAGCTTGGCGATTGAGGCG CAGGTTGGACCGGCTGCCGTCTGGGGAGAAGCCGAGCACTTCTATGGCTTGGTGCACATTGAGGAGCACGAAGACGATCA TCACGAGGAAGAAGAAGGGCACGATGAACACGCCGAAGAAGAGCACGAAGACCATGGCCACAGCAGTGGCTCCCCCTATC GCCGTACGGACGTGAAGGGCTACCTGCAAGTGCGCTATGAGCCCAACGAGCAGCTGGCCTTTTCAGCCATGTGGAAGCCT TACTACGTCACGGAAGATCAAGGGGAAGACATCAAAGGGTTCAAACATGAGATGGAATTTGGGGCCATCTATGCCTTCGG TGATGGTGATGTGAACTTCGCCCTTGGCGATGGACTGGAATCCATCGTTGACGGCATCTTCATCTCAGCAAAGAACGCCA CTGGCTGGGAAAGCGACAACACCTACGTCGGCAACTACACCGACGTGTGGCCTGGCTTTGGCTTCAACTACGACAAGCTG AATGTCACCCTCTCGGGCGGCCCGCGCTTCTATAGCCCTGGCAGCTACGCCAAATTACCTAGCCGCACCGATTGGGGCGG TGAAATTGCTCTCGAGTATCCACTGAGTAAAAACACTGTGTTGTTTGCTCACTGGGAGCCGATGTACAGCACCCAAGGCG GTGAAGGTTGGGGCAAAGGTTTCCAACACCACGTTGGCAGCGGTGTGACCTTTAGCTTCTGA
Upstream 100 bases:
>100_bases GACCAATAACGAGAATGATTATCATTCTTCCAGTGAATCGGTGCTTTTCTCCTTTCAGCCTCGCCTGACGAGACACACCG CTCAGGCACTAGGCCTTGCT
Downstream 100 bases:
>100_bases GCCAACCCTCACGGCTAGACGGGGAGACCCCGTCTAGCCTCTCGGCAACTACCATCCAATTCAGGTGCATCGCGCTCTCG GATTATTTTTGCTCGCGACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MACGLGLAGPTTLQAHAHGDGEGEELEPGEFRARPVITIEGHGGFENNLEGRPQHYAIDGLFGGVLEWGLENGGSLAIEA QVGPAAVWGEAEHFYGLVHIEEHEDDHHEEEEGHDEHAEEEHEDHGHSSGSPYRRTDVKGYLQVRYEPNEQLAFSAMWKP YYVTEDQGEDIKGFKHEMEFGAIYAFGDGDVNFALGDGLESIVDGIFISAKNATGWESDNTYVGNYTDVWPGFGFNYDKL NVTLSGGPRFYSPGSYAKLPSRTDWGGEIALEYPLSKNTVLFAHWEPMYSTQGGEGWGKGFQHHVGSGVTFSF
Sequences:
>Translated_313_residues MACGLGLAGPTTLQAHAHGDGEGEELEPGEFRARPVITIEGHGGFENNLEGRPQHYAIDGLFGGVLEWGLENGGSLAIEA QVGPAAVWGEAEHFYGLVHIEEHEDDHHEEEEGHDEHAEEEHEDHGHSSGSPYRRTDVKGYLQVRYEPNEQLAFSAMWKP YYVTEDQGEDIKGFKHEMEFGAIYAFGDGDVNFALGDGLESIVDGIFISAKNATGWESDNTYVGNYTDVWPGFGFNYDKL NVTLSGGPRFYSPGSYAKLPSRTDWGGEIALEYPLSKNTVLFAHWEPMYSTQGGEGWGKGFQHHVGSGVTFSF >Mature_312_residues ACGLGLAGPTTLQAHAHGDGEGEELEPGEFRARPVITIEGHGGFENNLEGRPQHYAIDGLFGGVLEWGLENGGSLAIEAQ VGPAAVWGEAEHFYGLVHIEEHEDDHHEEEEGHDEHAEEEHEDHGHSSGSPYRRTDVKGYLQVRYEPNEQLAFSAMWKPY YVTEDQGEDIKGFKHEMEFGAIYAFGDGDVNFALGDGLESIVDGIFISAKNATGWESDNTYVGNYTDVWPGFGFNYDKLN VTLSGGPRFYSPGSYAKLPSRTDWGGEIALEYPLSKNTVLFAHWEPMYSTQGGEGWGKGFQHHVGSGVTFSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34435; Mature: 34303
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACGLGLAGPTTLQAHAHGDGEGEELEPGEFRARPVITIEGHGGFENNLEGRPQHYAIDG CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEHH LFGGVLEWGLENGGSLAIEAQVGPAAVWGEAEHFYGLVHIEEHEDDHHEEEEGHDEHAEE HHHHHHHHHCCCCCEEEEEECCCCEEECCCCCCEEEEEEEECCCCCCCHHHCCCHHHHHH EHEDHGHSSGSPYRRTDVKGYLQVRYEPNEQLAFSAMWKPYYVTEDQGEDIKGFKHEMEF HHHHCCCCCCCCCEECCCCEEEEEEECCCCCEEEEEECCCEEEECCCCCCCHHHHHCCCE GAIYAFGDGDVNFALGDGLESIVDGIFISAKNATGWESDNTYVGNYTDVWPGFGFNYDKL EEEEEECCCCEEEEECCCHHHHHCCEEEEECCCCCCCCCCCEECCCCCCCCCCCCCEEEE NVTLSGGPRFYSPGSYAKLPSRTDWGGEIALEYPLSKNTVLFAHWEPMYSTQGGEGWGKG EEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCHHCC FQHHVGSGVTFSF HHHHCCCCEEECC >Mature Secondary Structure ACGLGLAGPTTLQAHAHGDGEGEELEPGEFRARPVITIEGHGGFENNLEGRPQHYAIDG CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEHH LFGGVLEWGLENGGSLAIEAQVGPAAVWGEAEHFYGLVHIEEHEDDHHEEEEGHDEHAEE HHHHHHHHHCCCCCEEEEEECCCCEEECCCCCCEEEEEEEECCCCCCCHHHCCCHHHHHH EHEDHGHSSGSPYRRTDVKGYLQVRYEPNEQLAFSAMWKPYYVTEDQGEDIKGFKHEMEF HHHHCCCCCCCCCEECCCCEEEEEEECCCCCEEEEEECCCEEEECCCCCCCHHHHHCCCE GAIYAFGDGDVNFALGDGLESIVDGIFISAKNATGWESDNTYVGNYTDVWPGFGFNYDKL EEEEEECCCCEEEEECCCHHHHHCCEEEEECCCCCCCCCCCEECCCCCCCCCCCCCEEEE NVTLSGGPRFYSPGSYAKLPSRTDWGGEIALEYPLSKNTVLFAHWEPMYSTQGGEGWGKG EEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCHHCC FQHHVGSGVTFSF HHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA