| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
Click here to switch to the map view.
The map label for this gene is 148242722
Identifier: 148242722
GI number: 148242722
Start: 1424593
End: 1425363
Strand: Direct
Name: 148242722
Synonym: SynRCC307_1623
Alternate gene names: NA
Gene position: 1424593-1425363 (Clockwise)
Preceding gene: 148242721
Following gene: 148242726
Centisome position: 64.03
GC content: 48.9
Gene sequence:
>771_bases GTGCATCGCGCTCTCGGATTATTTTTGCTCGCGACCACCTCAGTATTCACTGTTCCAGCCAATGCTCAAGAATTAGAAAC AACGGGCATTAGTGACGGCTTCTACCTCTATACGGAACAAGAAGTTGGATGGTTGAAAGGAGATGCCGAAGCAGCAGTGA CATCTGCACGGCTTGGCTATGCAGTGGAAGGCCCTCAACTAACGATTGGATTCGAACTCGGTCCGCGCTTCATCAGTACG TTTGATTTGCAGAATCGAACTGACTGGAGTGCAAAACTAGAAGGAGCATGGGTTCCGGAAAACACTCCCTTCGAAATTTA CGGTGAATATGAGCCTGCATTAAGCACTGAAACTGACAATAGTGGGCTTTACCAAACAGCCAAATGGGGCCTGGTCATTC CCCTTAGCCCTTCCAGTCAACCACAATTTGATGTTGGCCAAGGCTTTGCAGATGCTTCGGATGTTTACCTCAAGATTGAG CAAGAAGGTGCCTGGAGTGTTGGTGGACATCAAGAGTTGATCCTGGCAAGCCCCAGATTGGGATACGGTCTTGAGATTGA ACAAGTTGCCTTCGCCCTGGAAGCGGGACCAAGCTTTCGCTGGAGCGATAACAGGTCTCCACACACAGACCTGGCGGGCA AAGTCGACTTTCGGATCAGCCCAACAGATCACTATGAGTTATTTGTGGAATACGAACCGACTTACATCTTTCAAGCTGAA CAGCCAGGCCTTGTTCAAATCCTCAAAGGGGGACTGGTCTTCAACTTTTAA
Upstream 100 bases:
>100_bases CACCACGTTGGCAGCGGTGTGACCTTTAGCTTCTGAGCCAACCCTCACGGCTAGACGGGGAGACCCCGTCTAGCCTCTCG GCAACTACCATCCAATTCAG
Downstream 100 bases:
>100_bases ATGCGCGTCTTGGCTTGACCAAAAGCAACAGGATTCCCGAGCCAATCGCGAGGAGCGTTAGCACTCCAAGCAGCCAGGAG TAATAGGGCTGGAGATTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MHRALGLFLLATTSVFTVPANAQELETTGISDGFYLYTEQEVGWLKGDAEAAVTSARLGYAVEGPQLTIGFELGPRFIST FDLQNRTDWSAKLEGAWVPENTPFEIYGEYEPALSTETDNSGLYQTAKWGLVIPLSPSSQPQFDVGQGFADASDVYLKIE QEGAWSVGGHQELILASPRLGYGLEIEQVAFALEAGPSFRWSDNRSPHTDLAGKVDFRISPTDHYELFVEYEPTYIFQAE QPGLVQILKGGLVFNF
Sequences:
>Translated_256_residues MHRALGLFLLATTSVFTVPANAQELETTGISDGFYLYTEQEVGWLKGDAEAAVTSARLGYAVEGPQLTIGFELGPRFIST FDLQNRTDWSAKLEGAWVPENTPFEIYGEYEPALSTETDNSGLYQTAKWGLVIPLSPSSQPQFDVGQGFADASDVYLKIE QEGAWSVGGHQELILASPRLGYGLEIEQVAFALEAGPSFRWSDNRSPHTDLAGKVDFRISPTDHYELFVEYEPTYIFQAE QPGLVQILKGGLVFNF >Mature_256_residues MHRALGLFLLATTSVFTVPANAQELETTGISDGFYLYTEQEVGWLKGDAEAAVTSARLGYAVEGPQLTIGFELGPRFIST FDLQNRTDWSAKLEGAWVPENTPFEIYGEYEPALSTETDNSGLYQTAKWGLVIPLSPSSQPQFDVGQGFADASDVYLKIE QEGAWSVGGHQELILASPRLGYGLEIEQVAFALEAGPSFRWSDNRSPHTDLAGKVDFRISPTDHYELFVEYEPTYIFQAE QPGLVQILKGGLVFNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28246; Mature: 28246
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRALGLFLLATTSVFTVPANAQELETTGISDGFYLYTEQEVGWLKGDAEAAVTSARLGY CCHHHEEEEEEECEEEEECCCHHHHHHCCCCCCEEEEEECCCCEECCCCHHHEEHHHCCE AVEGPQLTIGFELGPRFISTFDLQNRTDWSAKLEGAWVPENTPFEIYGEYEPALSTETDN EECCCEEEEEEECCCCEEEEEECCCCCCCCEEECCEECCCCCCEEEEECCCCCCCCCCCC SGLYQTAKWGLVIPLSPSSQPQFDVGQGFADASDVYLKIEQEGAWSVGGHQELILASPRL CCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCEECCCCCEEEEECCCC GYGLEIEQVAFALEAGPSFRWSDNRSPHTDLAGKVDFRISPTDHYELFVEYEPTYIFQAE CCCCCHHHEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCEEEEEEC QPGLVQILKGGLVFNF CCCHHHEECCCEEECC >Mature Secondary Structure MHRALGLFLLATTSVFTVPANAQELETTGISDGFYLYTEQEVGWLKGDAEAAVTSARLGY CCHHHEEEEEEECEEEEECCCHHHHHHCCCCCCEEEEEECCCCEECCCCHHHEEHHHCCE AVEGPQLTIGFELGPRFISTFDLQNRTDWSAKLEGAWVPENTPFEIYGEYEPALSTETDN EECCCEEEEEEECCCCEEEEEECCCCCCCCEEECCEECCCCCCEEEEECCCCCCCCCCCC SGLYQTAKWGLVIPLSPSSQPQFDVGQGFADASDVYLKIEQEGAWSVGGHQELILASPRL CCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCEECCCCCEEEEECCCC GYGLEIEQVAFALEAGPSFRWSDNRSPHTDLAGKVDFRISPTDHYELFVEYEPTYIFQAE CCCCCHHHEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCEEEEEEC QPGLVQILKGGLVFNF CCCHHHEECCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA