Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148242675

Identifier: 148242675

GI number: 148242675

Start: 1392215

End: 1392688

Strand: Direct

Name: 148242675

Synonym: SynRCC307_1576

Alternate gene names: NA

Gene position: 1392215-1392688 (Clockwise)

Preceding gene: 148242674

Following gene: 148242677

Centisome position: 62.57

GC content: 63.29

Gene sequence:

>474_bases
ATGAGCGAAAGCCTTGTGATCAATGTCAGTGCAGACCAGATCCGCTGCCTAGACATGAGCCCGCTGCAGGAGCTGCGGCA
GCGCCCTGCCACCGCTCTGCTGGAACTGGAAGACGGCCTCGCGCTGCAACTGGAATGGCCCCGCGCCGATGACGATCCCC
GCGAACTCAGTGAAGTGCCGGAGTGCCGCCTGTGGAGCTTGCGGGCCGATGCGCTCTGCCCCTGGCTGACGCTGCTGCTG
CAACGCAGCGACGGCCAACTCAGCCGCCATGTGGCCATGCAAGTGCTGCATGAGTTCAGTCGCACGGAAGGCCTGCGCTT
TGATCCCGATGACCTCAGCCTTTGGATCAGCCATCGCCTCTTCTGGCTTGATGAATGGGGCAACCAACACGGGCTTGCCC
TACGCGGACGGCTCGGTCAAATGGCAGCCGTGTTGGGCTTCAACGTGGAAGCCGGCTTCTGGCCTCAGGCCTGA

Upstream 100 bases:

>100_bases
TCCGGGATCATCAGTTGATGCTGGTGCTGGTGCTTCGCTGCATTGAGCGCATGGCCGACCATGCCGTGAATGTGAGCCAG
CGGGTGGCGCGGCGCGAACG

Downstream 100 bases:

>100_bases
AGCCAGAGCGTGATGGCGCGGCGGCTGCTGTCGATCGCCAAGGCCAAGCTCAAAATCCGCAGCAGCCAGGCCAGTTGGCG
CGGACTGACGCGCTGCAACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MSESLVINVSADQIRCLDMSPLQELRQRPATALLELEDGLALQLEWPRADDDPRELSEVPECRLWSLRADALCPWLTLLL
QRSDGQLSRHVAMQVLHEFSRTEGLRFDPDDLSLWISHRLFWLDEWGNQHGLALRGRLGQMAAVLGFNVEAGFWPQA

Sequences:

>Translated_157_residues
MSESLVINVSADQIRCLDMSPLQELRQRPATALLELEDGLALQLEWPRADDDPRELSEVPECRLWSLRADALCPWLTLLL
QRSDGQLSRHVAMQVLHEFSRTEGLRFDPDDLSLWISHRLFWLDEWGNQHGLALRGRLGQMAAVLGFNVEAGFWPQA
>Mature_156_residues
SESLVINVSADQIRCLDMSPLQELRQRPATALLELEDGLALQLEWPRADDDPRELSEVPECRLWSLRADALCPWLTLLLQ
RSDGQLSRHVAMQVLHEFSRTEGLRFDPDDLSLWISHRLFWLDEWGNQHGLALRGRLGQMAAVLGFNVEAGFWPQA

Specific function: Unknown

COG id: COG5474

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17972; Mature: 17840

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESLVINVSADQIRCLDMSPLQELRQRPATALLELEDGLALQLEWPRADDDPRELSEVP
CCCCEEEEECCCEEEECCCCHHHHHHHCCHHEEEEECCCEEEEEECCCCCCCHHHHHCCC
ECRLWSLRADALCPWLTLLLQRSDGQLSRHVAMQVLHEFSRTEGLRFDPDDLSLWISHRL
CCEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHE
FWLDEWGNQHGLALRGRLGQMAAVLGFNVEAGFWPQA
EEEECCCCCCCEEECCHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SESLVINVSADQIRCLDMSPLQELRQRPATALLELEDGLALQLEWPRADDDPRELSEVP
CCCEEEEECCCEEEECCCCHHHHHHHCCHHEEEEECCCEEEEEECCCCCCCHHHHHCCC
ECRLWSLRADALCPWLTLLLQRSDGQLSRHVAMQVLHEFSRTEGLRFDPDDLSLWISHRL
CCEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHE
FWLDEWGNQHGLALRGRLGQMAAVLGFNVEAGFWPQA
EEEECCCCCCCEEECCHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA