| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242675
Identifier: 148242675
GI number: 148242675
Start: 1392215
End: 1392688
Strand: Direct
Name: 148242675
Synonym: SynRCC307_1576
Alternate gene names: NA
Gene position: 1392215-1392688 (Clockwise)
Preceding gene: 148242674
Following gene: 148242677
Centisome position: 62.57
GC content: 63.29
Gene sequence:
>474_bases ATGAGCGAAAGCCTTGTGATCAATGTCAGTGCAGACCAGATCCGCTGCCTAGACATGAGCCCGCTGCAGGAGCTGCGGCA GCGCCCTGCCACCGCTCTGCTGGAACTGGAAGACGGCCTCGCGCTGCAACTGGAATGGCCCCGCGCCGATGACGATCCCC GCGAACTCAGTGAAGTGCCGGAGTGCCGCCTGTGGAGCTTGCGGGCCGATGCGCTCTGCCCCTGGCTGACGCTGCTGCTG CAACGCAGCGACGGCCAACTCAGCCGCCATGTGGCCATGCAAGTGCTGCATGAGTTCAGTCGCACGGAAGGCCTGCGCTT TGATCCCGATGACCTCAGCCTTTGGATCAGCCATCGCCTCTTCTGGCTTGATGAATGGGGCAACCAACACGGGCTTGCCC TACGCGGACGGCTCGGTCAAATGGCAGCCGTGTTGGGCTTCAACGTGGAAGCCGGCTTCTGGCCTCAGGCCTGA
Upstream 100 bases:
>100_bases TCCGGGATCATCAGTTGATGCTGGTGCTGGTGCTTCGCTGCATTGAGCGCATGGCCGACCATGCCGTGAATGTGAGCCAG CGGGTGGCGCGGCGCGAACG
Downstream 100 bases:
>100_bases AGCCAGAGCGTGATGGCGCGGCGGCTGCTGTCGATCGCCAAGGCCAAGCTCAAAATCCGCAGCAGCCAGGCCAGTTGGCG CGGACTGACGCGCTGCAACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MSESLVINVSADQIRCLDMSPLQELRQRPATALLELEDGLALQLEWPRADDDPRELSEVPECRLWSLRADALCPWLTLLL QRSDGQLSRHVAMQVLHEFSRTEGLRFDPDDLSLWISHRLFWLDEWGNQHGLALRGRLGQMAAVLGFNVEAGFWPQA
Sequences:
>Translated_157_residues MSESLVINVSADQIRCLDMSPLQELRQRPATALLELEDGLALQLEWPRADDDPRELSEVPECRLWSLRADALCPWLTLLL QRSDGQLSRHVAMQVLHEFSRTEGLRFDPDDLSLWISHRLFWLDEWGNQHGLALRGRLGQMAAVLGFNVEAGFWPQA >Mature_156_residues SESLVINVSADQIRCLDMSPLQELRQRPATALLELEDGLALQLEWPRADDDPRELSEVPECRLWSLRADALCPWLTLLLQ RSDGQLSRHVAMQVLHEFSRTEGLRFDPDDLSLWISHRLFWLDEWGNQHGLALRGRLGQMAAVLGFNVEAGFWPQA
Specific function: Unknown
COG id: COG5474
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17972; Mature: 17840
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESLVINVSADQIRCLDMSPLQELRQRPATALLELEDGLALQLEWPRADDDPRELSEVP CCCCEEEEECCCEEEECCCCHHHHHHHCCHHEEEEECCCEEEEEECCCCCCCHHHHHCCC ECRLWSLRADALCPWLTLLLQRSDGQLSRHVAMQVLHEFSRTEGLRFDPDDLSLWISHRL CCEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHE FWLDEWGNQHGLALRGRLGQMAAVLGFNVEAGFWPQA EEEECCCCCCCEEECCHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SESLVINVSADQIRCLDMSPLQELRQRPATALLELEDGLALQLEWPRADDDPRELSEVP CCCEEEEECCCEEEECCCCHHHHHHHCCHHEEEEECCCEEEEEECCCCCCCHHHHHCCC ECRLWSLRADALCPWLTLLLQRSDGQLSRHVAMQVLHEFSRTEGLRFDPDDLSLWISHRL CCEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHE FWLDEWGNQHGLALRGRLGQMAAVLGFNVEAGFWPQA EEEECCCCCCCEEECCHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA