Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is phoU [H]

Identifier: 148242674

GI number: 148242674

Start: 1391562

End: 1392218

Strand: Direct

Name: phoU [H]

Synonym: SynRCC307_1575

Alternate gene names: 148242674

Gene position: 1391562-1392218 (Clockwise)

Preceding gene: 148242670

Following gene: 148242675

Centisome position: 62.54

GC content: 63.32

Gene sequence:

>657_bases
ATGCTGCTCTCCGCCTGGAGAAATCAGGTGCCTGCGCGCTCAGGAGCTGATGCGGTGGGGGCACTGAAGCAAGAGCTGTT
GCGCCTGGGCTCAATGGTGGAGGAATCAGCTGTGCTGGCCCGGGCCGTGCTGTCGGGACCCGACATGGAGGCAGCACCAC
AAATCCGCCGTGGCGACGACCGAATTGACAAGCTCTACCGGCGCCTGGAGGAGGAATGCGCTGATCTGCTGTGTCACAAG
CGCCTCAGCCAAACCCAGGTGCGCGAGGTGCTGAGTTACATGCACTGCCTGCGCGATCTCGAGCGCTTTGGCGACTACTG
CAAAGAGCTGGCCACCTTGGGCGAGCAATTGCTGCCGGCGCAGCCGGTGATGCTCCGCGACGAGGTGCTGACGATGCTCG
ATCGTTGCCGCTCGCTCTTAGCCCTTGCCCTCAACAGCCTCAGCGAGGAAGACCTCAGCGCCGGGGCCAGGCTCCAGGCC
CTCGATGACCTGGTGGACCGGGACTACGAACGGCTGGTGGAAGAGCTCACTCAAACCTGCACCTCCAGCGAATTCCGGGA
TCATCAGTTGATGCTGGTGCTGGTGCTTCGCTGCATTGAGCGCATGGCCGACCATGCCGTGAATGTGAGCCAGCGGGTGG
CGCGGCGCGAACGATGA

Upstream 100 bases:

>100_bases
AGAACCTCTCCATTTTCCGTGCCAGCCCCGACTTCCCAAGGGGGCTGTCACAGCTCTTGATGGCCGTCAGAACTAGGTTG
CCAGCAGAGGATTGAACGCC

Downstream 100 bases:

>100_bases
GCGAAAGCCTTGTGATCAATGTCAGTGCAGACCAGATCCGCTGCCTAGACATGAGCCCGCTGCAGGAGCTGCGGCAGCGC
CCTGCCACCGCTCTGCTGGA

Product: phosphate uptake regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MLLSAWRNQVPARSGADAVGALKQELLRLGSMVEESAVLARAVLSGPDMEAAPQIRRGDDRIDKLYRRLEEECADLLCHK
RLSQTQVREVLSYMHCLRDLERFGDYCKELATLGEQLLPAQPVMLRDEVLTMLDRCRSLLALALNSLSEEDLSAGARLQA
LDDLVDRDYERLVEELTQTCTSSEFRDHQLMLVLVLRCIERMADHAVNVSQRVARRER

Sequences:

>Translated_218_residues
MLLSAWRNQVPARSGADAVGALKQELLRLGSMVEESAVLARAVLSGPDMEAAPQIRRGDDRIDKLYRRLEEECADLLCHK
RLSQTQVREVLSYMHCLRDLERFGDYCKELATLGEQLLPAQPVMLRDEVLTMLDRCRSLLALALNSLSEEDLSAGARLQA
LDDLVDRDYERLVEELTQTCTSSEFRDHQLMLVLVLRCIERMADHAVNVSQRVARRER
>Mature_218_residues
MLLSAWRNQVPARSGADAVGALKQELLRLGSMVEESAVLARAVLSGPDMEAAPQIRRGDDRIDKLYRRLEEECADLLCHK
RLSQTQVREVLSYMHCLRDLERFGDYCKELATLGEQLLPAQPVMLRDEVLTMLDRCRSLLALALNSLSEEDLSAGARLQA
LDDLVDRDYERLVEELTQTCTSSEFRDHQLMLVLVLRCIERMADHAVNVSQRVARRER

Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]

COG id: COG0704

COG function: function code P; Phosphate uptake regulator

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phoU family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008170 [H]

Pfam domain/function: PF01895 PhoU [H]

EC number: NA

Molecular weight: Translated: 24822; Mature: 24822

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS00068 MDH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLSAWRNQVPARSGADAVGALKQELLRLGSMVEESAVLARAVLSGPDMEAAPQIRRGDD
CCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCH
RIDKLYRRLEEECADLLCHKRLSQTQVREVLSYMHCLRDLERFGDYCKELATLGEQLLPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QPVMLRDEVLTMLDRCRSLLALALNSLSEEDLSAGARLQALDDLVDRDYERLVEELTQTC
CCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
TSSEFRDHQLMLVLVLRCIERMADHAVNVSQRVARRER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLLSAWRNQVPARSGADAVGALKQELLRLGSMVEESAVLARAVLSGPDMEAAPQIRRGDD
CCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCH
RIDKLYRRLEEECADLLCHKRLSQTQVREVLSYMHCLRDLERFGDYCKELATLGEQLLPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QPVMLRDEVLTMLDRCRSLLALALNSLSEEDLSAGARLQALDDLVDRDYERLVEELTQTC
CCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
TSSEFRDHQLMLVLVLRCIERMADHAVNVSQRVARRER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]