| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is phoU [H]
Identifier: 148242674
GI number: 148242674
Start: 1391562
End: 1392218
Strand: Direct
Name: phoU [H]
Synonym: SynRCC307_1575
Alternate gene names: 148242674
Gene position: 1391562-1392218 (Clockwise)
Preceding gene: 148242670
Following gene: 148242675
Centisome position: 62.54
GC content: 63.32
Gene sequence:
>657_bases ATGCTGCTCTCCGCCTGGAGAAATCAGGTGCCTGCGCGCTCAGGAGCTGATGCGGTGGGGGCACTGAAGCAAGAGCTGTT GCGCCTGGGCTCAATGGTGGAGGAATCAGCTGTGCTGGCCCGGGCCGTGCTGTCGGGACCCGACATGGAGGCAGCACCAC AAATCCGCCGTGGCGACGACCGAATTGACAAGCTCTACCGGCGCCTGGAGGAGGAATGCGCTGATCTGCTGTGTCACAAG CGCCTCAGCCAAACCCAGGTGCGCGAGGTGCTGAGTTACATGCACTGCCTGCGCGATCTCGAGCGCTTTGGCGACTACTG CAAAGAGCTGGCCACCTTGGGCGAGCAATTGCTGCCGGCGCAGCCGGTGATGCTCCGCGACGAGGTGCTGACGATGCTCG ATCGTTGCCGCTCGCTCTTAGCCCTTGCCCTCAACAGCCTCAGCGAGGAAGACCTCAGCGCCGGGGCCAGGCTCCAGGCC CTCGATGACCTGGTGGACCGGGACTACGAACGGCTGGTGGAAGAGCTCACTCAAACCTGCACCTCCAGCGAATTCCGGGA TCATCAGTTGATGCTGGTGCTGGTGCTTCGCTGCATTGAGCGCATGGCCGACCATGCCGTGAATGTGAGCCAGCGGGTGG CGCGGCGCGAACGATGA
Upstream 100 bases:
>100_bases AGAACCTCTCCATTTTCCGTGCCAGCCCCGACTTCCCAAGGGGGCTGTCACAGCTCTTGATGGCCGTCAGAACTAGGTTG CCAGCAGAGGATTGAACGCC
Downstream 100 bases:
>100_bases GCGAAAGCCTTGTGATCAATGTCAGTGCAGACCAGATCCGCTGCCTAGACATGAGCCCGCTGCAGGAGCTGCGGCAGCGC CCTGCCACCGCTCTGCTGGA
Product: phosphate uptake regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MLLSAWRNQVPARSGADAVGALKQELLRLGSMVEESAVLARAVLSGPDMEAAPQIRRGDDRIDKLYRRLEEECADLLCHK RLSQTQVREVLSYMHCLRDLERFGDYCKELATLGEQLLPAQPVMLRDEVLTMLDRCRSLLALALNSLSEEDLSAGARLQA LDDLVDRDYERLVEELTQTCTSSEFRDHQLMLVLVLRCIERMADHAVNVSQRVARRER
Sequences:
>Translated_218_residues MLLSAWRNQVPARSGADAVGALKQELLRLGSMVEESAVLARAVLSGPDMEAAPQIRRGDDRIDKLYRRLEEECADLLCHK RLSQTQVREVLSYMHCLRDLERFGDYCKELATLGEQLLPAQPVMLRDEVLTMLDRCRSLLALALNSLSEEDLSAGARLQA LDDLVDRDYERLVEELTQTCTSSEFRDHQLMLVLVLRCIERMADHAVNVSQRVARRER >Mature_218_residues MLLSAWRNQVPARSGADAVGALKQELLRLGSMVEESAVLARAVLSGPDMEAAPQIRRGDDRIDKLYRRLEEECADLLCHK RLSQTQVREVLSYMHCLRDLERFGDYCKELATLGEQLLPAQPVMLRDEVLTMLDRCRSLLALALNSLSEEDLSAGARLQA LDDLVDRDYERLVEELTQTCTSSEFRDHQLMLVLVLRCIERMADHAVNVSQRVARRER
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 24822; Mature: 24822
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS00068 MDH
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLSAWRNQVPARSGADAVGALKQELLRLGSMVEESAVLARAVLSGPDMEAAPQIRRGDD CCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCH RIDKLYRRLEEECADLLCHKRLSQTQVREVLSYMHCLRDLERFGDYCKELATLGEQLLPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC QPVMLRDEVLTMLDRCRSLLALALNSLSEEDLSAGARLQALDDLVDRDYERLVEELTQTC CCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH TSSEFRDHQLMLVLVLRCIERMADHAVNVSQRVARRER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLLSAWRNQVPARSGADAVGALKQELLRLGSMVEESAVLARAVLSGPDMEAAPQIRRGDD CCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCH RIDKLYRRLEEECADLLCHKRLSQTQVREVLSYMHCLRDLERFGDYCKELATLGEQLLPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC QPVMLRDEVLTMLDRCRSLLALALNSLSEEDLSAGARLQALDDLVDRDYERLVEELTQTC CCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH TSSEFRDHQLMLVLVLRCIERMADHAVNVSQRVARRER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]