| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is yhhW [C]
Identifier: 148242668
GI number: 148242668
Start: 1387064
End: 1387777
Strand: Direct
Name: yhhW [C]
Synonym: SynRCC307_1569
Alternate gene names: 148242668
Gene position: 1387064-1387777 (Clockwise)
Preceding gene: 148242667
Following gene: 148242669
Centisome position: 62.34
GC content: 63.31
Gene sequence:
>714_bases ATGACCACACCCCCTCTGCGCAGCCTGGGCCGCTTGCGGCCTGCTGCAGAACGCTTCCACAGCCAGCTCGATTGGCTCGA TAGCTGGCATAGCTTCAGCTTTTCGCACCACCACGACCCCGATTGGATGGGTTTTGGTCCGCTGCGAGTGATCAATGACG ACACGATCGCCCCAGGCCAAGGCTTTGGCATGCACCCGCACCAGAGCATGGAAATCATCACCGTGATGGTGGAAGGTGAG CTCACCCATCAAGACTCCATGGGTCACCGCGAAGTGCTCCGCGCCGGCGAGGTGCAGCGCATGAGCGCCGGCCGAGGCGT GGTGCACAGCGAAATCAACCAATCCGCCTCCCCCTGCCGGCTCCTGCAGATCTGGGTGGAACCGCAAACCCCTGGGGGAG ATCCGCAATACGAGCAGAAGCCGTTTGCCATTGCAGAGGGCTGGACCTGCCTGCTGGATCCCAGCGGTGAGGCGGAGGCC ATGGCCATTCAGCGGCCGGTGCGGCTCTGGCGCAGCCAACCGCAACCAGGAATCCCCCTGGAACTGCCGCTGCAGCCCAA CCGGCAGGGGTGGCTGCAGCTGATCGATGGCGCCATCACACTGGATGGGCAATTGCTGCAACGGGGTGATGGTTTGGGCT TCGAGGGCGCACCGGGGCAAACCATCGTGAGCAGCAGCACTGGCACCGACCTGCTGCTGTTTGAACTGCAATGA
Upstream 100 bases:
>100_bases GCTCAGCAATTTCGCCAAGCCAGCCAAAGACGACTCCATCCAAGACTTGCTGCGCCGCCTGATGCAGATGCAACCACTCG CGTTGGGCACCTGAGCAGCG
Downstream 100 bases:
>100_bases GCGCCTGGCAGCGCCAGCTCACCGTTCCGCAGTTCACCGTTGTCAGCGGTTTGCTGGTGATTGCCCTTGGCACGCTGCTG CTGGCCACGCCGCTGTGCTC
Product: putative Pirin-related protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein sll1773 [H]
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MTTPPLRSLGRLRPAAERFHSQLDWLDSWHSFSFSHHHDPDWMGFGPLRVINDDTIAPGQGFGMHPHQSMEIITVMVEGE LTHQDSMGHREVLRAGEVQRMSAGRGVVHSEINQSASPCRLLQIWVEPQTPGGDPQYEQKPFAIAEGWTCLLDPSGEAEA MAIQRPVRLWRSQPQPGIPLELPLQPNRQGWLQLIDGAITLDGQLLQRGDGLGFEGAPGQTIVSSSTGTDLLLFELQ
Sequences:
>Translated_237_residues MTTPPLRSLGRLRPAAERFHSQLDWLDSWHSFSFSHHHDPDWMGFGPLRVINDDTIAPGQGFGMHPHQSMEIITVMVEGE LTHQDSMGHREVLRAGEVQRMSAGRGVVHSEINQSASPCRLLQIWVEPQTPGGDPQYEQKPFAIAEGWTCLLDPSGEAEA MAIQRPVRLWRSQPQPGIPLELPLQPNRQGWLQLIDGAITLDGQLLQRGDGLGFEGAPGQTIVSSSTGTDLLLFELQ >Mature_236_residues TTPPLRSLGRLRPAAERFHSQLDWLDSWHSFSFSHHHDPDWMGFGPLRVINDDTIAPGQGFGMHPHQSMEIITVMVEGEL THQDSMGHREVLRAGEVQRMSAGRGVVHSEINQSASPCRLLQIWVEPQTPGGDPQYEQKPFAIAEGWTCLLDPSGEAEAM AIQRPVRLWRSQPQPGIPLELPLQPNRQGWLQLIDGAITLDGQLLQRGDGLGFEGAPGQTIVSSSTGTDLLLFELQ
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Escherichia coli, GI1789847, Length=226, Percent_Identity=41.5929203539823, Blast_Score=184, Evalue=4e-48, Organism=Escherichia coli, GI1789493, Length=116, Percent_Identity=33.6206896551724, Blast_Score=77, Evalue=8e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 26275; Mature: 26144
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPPLRSLGRLRPAAERFHSQLDWLDSWHSFSFSHHHDPDWMGFGPLRVINDDTIAPGQ CCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCC GFGMHPHQSMEIITVMVEGELTHQDSMGHREVLRAGEVQRMSAGRGVVHSEINQSASPCR CCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHCCCHHHHHCCCCHHHHHHCCCCCCEE LLQIWVEPQTPGGDPQYEQKPFAIAEGWTCLLDPSGEAEAMAIQRPVRLWRSQPQPGIPL EEEEEECCCCCCCCCCCCCCCEEEECCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCE ELPLQPNRQGWLQLIDGAITLDGQLLQRGDGLGFEGAPGQTIVSSSTGTDLLLFELQ ECCCCCCHHHHHHHHCCEEEECHHHHHCCCCCCCCCCCCCEEEECCCCCEEEEEEEC >Mature Secondary Structure TTPPLRSLGRLRPAAERFHSQLDWLDSWHSFSFSHHHDPDWMGFGPLRVINDDTIAPGQ CCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCC GFGMHPHQSMEIITVMVEGELTHQDSMGHREVLRAGEVQRMSAGRGVVHSEINQSASPCR CCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHCCCHHHHHCCCCHHHHHHCCCCCCEE LLQIWVEPQTPGGDPQYEQKPFAIAEGWTCLLDPSGEAEAMAIQRPVRLWRSQPQPGIPL EEEEEECCCCCCCCCCCCCCCEEEECCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCE ELPLQPNRQGWLQLIDGAITLDGQLLQRGDGLGFEGAPGQTIVSSSTGTDLLLFELQ ECCCCCCHHHHHHHHCCEEEECHHHHHCCCCCCCCCCCCCEEEECCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]