| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is trkG [H]
Identifier: 148242669
GI number: 148242669
Start: 1387774
End: 1389144
Strand: Direct
Name: trkG [H]
Synonym: SynRCC307_1570
Alternate gene names: 148242669
Gene position: 1387774-1389144 (Clockwise)
Preceding gene: 148242668
Following gene: 148242670
Centisome position: 62.37
GC content: 63.38
Gene sequence:
>1371_bases ATGAGCGCCTGGCAGCGCCAGCTCACCGTTCCGCAGTTCACCGTTGTCAGCGGTTTGCTGGTGATTGCCCTTGGCACGCT GCTGCTGGCCACGCCGCTGTGCTCTGGGCCATCAGTGGACCTCTGGGAGGCGCTCTTCACCGCCACCTCCGCCATCACGG TGACGGGCCTCTCGATCATTGATGTCGGCACGGAGCTGACGTTCTTTGGACAGCTGGTGCTGGCGGTGTTGATCATCACC GGCGGCCTGGGACTGATGGCCATCAGCACCTTCCTGCAGGGCTTTGTGCAGGGCCGCACGGGCCTGCGTCAACGCATCGA CCAGGGCCGCACCCTCGACCAATTCGGCGTGGGGGGTGTGGGCTCCACCTTCCGGGCCATCGTGATCAGTGGCGGTGTGC TGATGCTGATTGGCACGGTGCTGCTCTATGCCTTCGGCTTCACCGACATCAGCAACCCAGCCGAGCGGCTCTGGGCCGCG ATGTTCCACAGCATCAGCGCCTTCAACAACGCCGGATTCAGCCTGTGGTCGGGAAGCCTTGAGGCTTATCAGAGCAATGC TGTGGTCTGCGCGGTGGTGGCAGCGCTGGTGATCGCTGGGGGCATTGGCTGGCGCGTGCTTTCCGATCTCTGGATTCATC GGCGCAACCCCCTGGAATGGCGCCGCTTGAGCCTGCAAAGCCGCGTGGTGCTGCGCAGCAGCGTGCTGTTGATCGCGGCC GGCACCTTGGGGCTGCTATTCACCGAACGGCTAGCCCCCGCTGGTGTGGTGGGGGGCTTACCGCTGCTGCAAAAGGTTGG AGTTTCGCTGTTTCAGGTGATCTCAGCGCGCACCGCAGGGTTTGTCTCCGTGCCCCTGTCGCTCGACACCATCTCCCATG CGGGGTTGTTTCTGCTGATCCTGTTGATGTTCATTGGCGCCAGCCCCGGGGGCACTGGCGGCGGCATCAAAACCACCACT TTTGCGGTGCTGCTGTGCACCACCCGTTCCACCCTGGAAGATCGCACCGAGGTGGTGATCAATCGCCGCCGCATCCCCGG CAAACAGGTGCTGCGGGCCGTTGGCATCACCCTGGCTTCGGCCGGAGTGGTGGTGCTGATGACCATGCTGTTGGGGCTGG GGGACACCGAAGCCGGTGTGCTGGGAGATGAAGACTTCACCTTTTTGGAGAAGTTGTTCACCTGCGTGTCAGCCTTTGCC TCGGTTGGCTTTGATCTCGGCATCACCGCCCGCTTGGACCGCTGGGGACAACTGGTGCTGCTGGTTGGCATGTTCATCGG CCGACTCGGCATCCTGTTGTTGCTCTCGGCCCTCTTTGGCCGGCGTCCCCCCAGCCGGGTGCGCTACCCGCAAGAAGAAC TCATCCTGTAG
Upstream 100 bases:
>100_bases AATTGCTGCAACGGGGTGATGGTTTGGGCTTCGAGGGCGCACCGGGGCAAACCATCGTGAGCAGCAGCACTGGCACCGAC CTGCTGCTGTTTGAACTGCA
Downstream 100 bases:
>100_bases TCACCACCGTGAACGCCATGACCGGCAAGCTCTGGTTATCCCAATCCAATCGCCGTGATCTCTCCGATGGCTATGCGGTG ATCGGCCTGGGGCGTTTTGG
Product: Trk-type K+ transport systems, membrane component
Products: NA
Alternate protein names: K(+)-uptake protein ktrB [H]
Number of amino acids: Translated: 456; Mature: 455
Protein sequence:
>456_residues MSAWQRQLTVPQFTVVSGLLVIALGTLLLATPLCSGPSVDLWEALFTATSAITVTGLSIIDVGTELTFFGQLVLAVLIIT GGLGLMAISTFLQGFVQGRTGLRQRIDQGRTLDQFGVGGVGSTFRAIVISGGVLMLIGTVLLYAFGFTDISNPAERLWAA MFHSISAFNNAGFSLWSGSLEAYQSNAVVCAVVAALVIAGGIGWRVLSDLWIHRRNPLEWRRLSLQSRVVLRSSVLLIAA GTLGLLFTERLAPAGVVGGLPLLQKVGVSLFQVISARTAGFVSVPLSLDTISHAGLFLLILLMFIGASPGGTGGGIKTTT FAVLLCTTRSTLEDRTEVVINRRRIPGKQVLRAVGITLASAGVVVLMTMLLGLGDTEAGVLGDEDFTFLEKLFTCVSAFA SVGFDLGITARLDRWGQLVLLVGMFIGRLGILLLLSALFGRRPPSRVRYPQEELIL
Sequences:
>Translated_456_residues MSAWQRQLTVPQFTVVSGLLVIALGTLLLATPLCSGPSVDLWEALFTATSAITVTGLSIIDVGTELTFFGQLVLAVLIIT GGLGLMAISTFLQGFVQGRTGLRQRIDQGRTLDQFGVGGVGSTFRAIVISGGVLMLIGTVLLYAFGFTDISNPAERLWAA MFHSISAFNNAGFSLWSGSLEAYQSNAVVCAVVAALVIAGGIGWRVLSDLWIHRRNPLEWRRLSLQSRVVLRSSVLLIAA GTLGLLFTERLAPAGVVGGLPLLQKVGVSLFQVISARTAGFVSVPLSLDTISHAGLFLLILLMFIGASPGGTGGGIKTTT FAVLLCTTRSTLEDRTEVVINRRRIPGKQVLRAVGITLASAGVVVLMTMLLGLGDTEAGVLGDEDFTFLEKLFTCVSAFA SVGFDLGITARLDRWGQLVLLVGMFIGRLGILLLLSALFGRRPPSRVRYPQEELIL >Mature_455_residues SAWQRQLTVPQFTVVSGLLVIALGTLLLATPLCSGPSVDLWEALFTATSAITVTGLSIIDVGTELTFFGQLVLAVLIITG GLGLMAISTFLQGFVQGRTGLRQRIDQGRTLDQFGVGGVGSTFRAIVISGGVLMLIGTVLLYAFGFTDISNPAERLWAAM FHSISAFNNAGFSLWSGSLEAYQSNAVVCAVVAALVIAGGIGWRVLSDLWIHRRNPLEWRRLSLQSRVVLRSSVLLIAAG TLGLLFTERLAPAGVVGGLPLLQKVGVSLFQVISARTAGFVSVPLSLDTISHAGLFLLILLMFIGASPGGTGGGIKTTTF AVLLCTTRSTLEDRTEVVINRRRIPGKQVLRAVGITLASAGVVVLMTMLLGLGDTEAGVLGDEDFTFLEKLFTCVSAFAS VGFDLGITARLDRWGQLVLLVGMFIGRLGILLLLSALFGRRPPSRVRYPQEELIL
Specific function: Integral membrane subunit of the KtrAB potassium uptake transporter. The 2 major potassium transporter complexes KtrAB and KtrCD confer resistance to both suddenly imposed and prolonged osmotic stress [H]
COG id: COG0168
COG function: function code P; Trk-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trkH potassium transport family. Ktr (TC 2.A.38.4) subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003445 - InterPro: IPR004772 [H]
Pfam domain/function: PF02386 TrkH [H]
EC number: NA
Molecular weight: Translated: 48449; Mature: 48318
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAWQRQLTVPQFTVVSGLLVIALGTLLLATPLCSGPSVDLWEALFTATSAITVTGLSII CCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEECCHHH DVGTELTFFGQLVLAVLIITGGLGLMAISTFLQGFVQGRTGLRQRIDQGRTLDQFGVGGV HCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCC GSTFRAIVISGGVLMLIGTVLLYAFGFTDISNPAERLWAAMFHSISAFNNAGFSLWSGSL CHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCH EAYQSNAVVCAVVAALVIAGGIGWRVLSDLWIHRRNPLEWRRLSLQSRVVLRSSVLLIAA HHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH GTLGLLFTERLAPAGVVGGLPLLQKVGVSLFQVISARTAGFVSVPLSLDTISHAGLFLLI HHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHH LLMFIGASPGGTGGGIKTTTFAVLLCTTRSTLEDRTEVVINRRRIPGKQVLRAVGITLAS HHHHHCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH AGVVVLMTMLLGLGDTEAGVLGDEDFTFLEKLFTCVSAFASVGFDLGITARLDRWGQLVL HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH LVGMFIGRLGILLLLSALFGRRPPSRVRYPQEELIL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCC >Mature Secondary Structure SAWQRQLTVPQFTVVSGLLVIALGTLLLATPLCSGPSVDLWEALFTATSAITVTGLSII CCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEECCHHH DVGTELTFFGQLVLAVLIITGGLGLMAISTFLQGFVQGRTGLRQRIDQGRTLDQFGVGGV HCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCC GSTFRAIVISGGVLMLIGTVLLYAFGFTDISNPAERLWAAMFHSISAFNNAGFSLWSGSL CHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCH EAYQSNAVVCAVVAALVIAGGIGWRVLSDLWIHRRNPLEWRRLSLQSRVVLRSSVLLIAA HHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH GTLGLLFTERLAPAGVVGGLPLLQKVGVSLFQVISARTAGFVSVPLSLDTISHAGLFLLI HHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHH LLMFIGASPGGTGGGIKTTTFAVLLCTTRSTLEDRTEVVINRRRIPGKQVLRAVGITLAS HHHHHCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH AGVVVLMTMLLGLGDTEAGVLGDEDFTFLEKLFTCVSAFASVGFDLGITARLDRWGQLVL HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH LVGMFIGRLGILLLLSALFGRRPPSRVRYPQEELIL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]