Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148242661

Identifier: 148242661

GI number: 148242661

Start: 1380408

End: 1381061

Strand: Direct

Name: 148242661

Synonym: SynRCC307_1562

Alternate gene names: NA

Gene position: 1380408-1381061 (Clockwise)

Preceding gene: 148242660

Following gene: 148242662

Centisome position: 62.04

GC content: 63.46

Gene sequence:

>654_bases
ATGACCTTGCCACTTCCTGCTTACGAGCCTCTGCCCGAGGCGCCCCAAGCAGCCAGTGATCTCATCGAAGTGGCGATTGC
GGCGCTCCATCCCACCCAACTGTGTGTGGGCATGGCTGAGATCCAGCACCGCATCGCTGACTTCCAAAACGAATCCCCCA
AGGAGCGCCGGCGCTATTTGAAAACCAAGCCGATTCCGTTGGTGCGCAGCTCAGCGGGCGAGCTCTGGATGGTGGATCGC
CATCACCGCCTGCGGGGGCTACTAGCGGTGGATCCCGAGGCCACCGGCTGGGGCTACATCGCCCTGGATCTGCCCTTCAA
CAACCGCAGCGCCGTGCTGCAGGCCTTGCAACAGCGCGGCTGGCTTTACCTCTATGACGGCCGGGGGCTCGGACCACTGG
CACCAGAAGAACTTCCCGAGACCCTGCTGGGCTGCCAAGACGACCCCTACCGCAGCTTGGTGTGGAAGCTGAAGCGCGAA
GGCGTGATTGATCGCGCTCCGCTGATTCCCTTCCATGAATTTCGCTGGGCGGCCTGGCTCAGGCGCAAAGCATTGCCGCC
CTTCAACTCACAACAACTGGAGCCAGCTCTGCCAGCAGCCAGGGCCTATGCCCGCTCGGCCGCTGCCTCTCGCATGGCCG
GCTGGAAAGGCTGA

Upstream 100 bases:

>100_bases
TCGAGACCGCCCTCGGGCGCCATCACACCGTTAGGGACCAGGCCGTCAGGCCTGAGCATTAGAAGGGCCTCCGCCTGGCG
GGGGCCCTTACGCTTTTGCC

Downstream 100 bases:

>100_bases
TCAGAAGCAAAACGGAAGCTAGCGCCACCGCTTCAATTTCATATCAAGAATTGAAAGACTTACACCACTATCTGGGAGGG
TCCTGCGATGGCTCCCACGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MTLPLPAYEPLPEAPQAASDLIEVAIAALHPTQLCVGMAEIQHRIADFQNESPKERRRYLKTKPIPLVRSSAGELWMVDR
HHRLRGLLAVDPEATGWGYIALDLPFNNRSAVLQALQQRGWLYLYDGRGLGPLAPEELPETLLGCQDDPYRSLVWKLKRE
GVIDRAPLIPFHEFRWAAWLRRKALPPFNSQQLEPALPAARAYARSAAASRMAGWKG

Sequences:

>Translated_217_residues
MTLPLPAYEPLPEAPQAASDLIEVAIAALHPTQLCVGMAEIQHRIADFQNESPKERRRYLKTKPIPLVRSSAGELWMVDR
HHRLRGLLAVDPEATGWGYIALDLPFNNRSAVLQALQQRGWLYLYDGRGLGPLAPEELPETLLGCQDDPYRSLVWKLKRE
GVIDRAPLIPFHEFRWAAWLRRKALPPFNSQQLEPALPAARAYARSAAASRMAGWKG
>Mature_216_residues
TLPLPAYEPLPEAPQAASDLIEVAIAALHPTQLCVGMAEIQHRIADFQNESPKERRRYLKTKPIPLVRSSAGELWMVDRH
HRLRGLLAVDPEATGWGYIALDLPFNNRSAVLQALQQRGWLYLYDGRGLGPLAPEELPETLLGCQDDPYRSLVWKLKREG
VIDRAPLIPFHEFRWAAWLRRKALPPFNSQQLEPALPAARAYARSAAASRMAGWKG

Specific function: Unknown

COG id: COG4318

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24443; Mature: 24312

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLPLPAYEPLPEAPQAASDLIEVAIAALHPTQLCVGMAEIQHRIADFQNESPKERRRYL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
KTKPIPLVRSSAGELWMVDRHHRLRGLLAVDPEATGWGYIALDLPFNNRSAVLQALQQRG
CCCCCCCEECCCCCEEEECCHHHHCCEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHCC
WLYLYDGRGLGPLAPEELPETLLGCQDDPYRSLVWKLKREGVIDRAPLIPFHEFRWAAWL
CEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
RRKALPPFNSQQLEPALPAARAYARSAAASRMAGWKG
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TLPLPAYEPLPEAPQAASDLIEVAIAALHPTQLCVGMAEIQHRIADFQNESPKERRRYL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
KTKPIPLVRSSAGELWMVDRHHRLRGLLAVDPEATGWGYIALDLPFNNRSAVLQALQQRG
CCCCCCCEECCCCCEEEECCHHHHCCEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHCC
WLYLYDGRGLGPLAPEELPETLLGCQDDPYRSLVWKLKREGVIDRAPLIPFHEFRWAAWL
CEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
RRKALPPFNSQQLEPALPAARAYARSAAASRMAGWKG
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA