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The map label for this gene is lytR [H]

Identifier: 148242662

GI number: 148242662

Start: 1381149

End: 1382012

Strand: Direct

Name: lytR [H]

Synonym: SynRCC307_1563

Alternate gene names: 148242662

Gene position: 1381149-1382012 (Clockwise)

Preceding gene: 148242661

Following gene: 148242663

Centisome position: 62.08

GC content: 61.23

Gene sequence:

>864_bases
ATGGCTCCCACGAAGCGAGAGCGGCGATTCAGATTCCTGACTCCATTGATCGGTATGGGGATTGCTCTGGTGGGCGGCCT
CGGATTTGGCGCCATTGCTGTTGAGCCTTTGTTGCTGCGGCTGAGCGGCTCGAGCACCAGCCTGGGTGCCCATCAGCTCC
AGCAGGTGCTGGCGCCCGTTCCACAGGAGGTGTTGCTCCTTGGCACCGATGCCGAAGGCCTACGCACCGATGTGATCGCC
AGCTTGCATCTCACCGGCGAGGGGGCCCACCTGACGCAAATCCCGCGCGACACGTTCATTCGCTCCAGCCAACACGGTGA
GCAGAAGGTCAACGCGCTCTATGCCTTTGGAGGCATCAAAGCCATCAGCGCTGGGGCTGAGGAGCTGATTGGACGGCCTA
TGCCGCATTACATCGTGCTCAATCTCGAAACCCTGCGGGAACTGGGGGATGCCCTGGGCGGGTTGGAAATGACAGTGGCC
AAACAAATGCGGTACAGCGACCGCAGCCAGAACCTGGAGATCGACTTATTGCCAGGCCATCAGCGCCTGCGGGGGCGCGC
TCTCGAGGGCTACTTGCGCTTTCGAAATGACGGCGAAGGAGATCTCGGCCGAATGCGGCGGCAGCGGCAAGCGGTGGATG
CGCTCATGGGGCAACTGGCAACAGCCGAAGCCATGGCCAAGCTTCCCCAGCTGCTGCGGATCGCCAACGACAACATCAAG
ACCAACCTCAACCTGTTCCAGCTCGCCGGCCTCGCCAAGGTGGTGGCCGGCCAACAGCTCAGTGCGTCCTCGTTGCCCGG
CTATTTGGGTTATCGAAACGGAATCAGCTACTGGTTTGTCACCAATCCCGAGCGATCCCTGTAA

Upstream 100 bases:

>100_bases
CTGGAAAGGCTGATCAGAAGCAAAACGGAAGCTAGCGCCACCGCTTCAATTTCATATCAAGAATTGAAAGACTTACACCA
CTATCTGGGAGGGTCCTGCG

Downstream 100 bases:

>100_bases
AGCAATCGTGGCCTAGAAGCGCTCACCAGAGCTAAGAAGGGGAGTTCATGGAGATTGCAGTTGCAACTGCTTAAAGAGAG
CGGTCAGAGAGAAGTTTTCT

Product: membrane-bound transcriptional regulator

Products: NA

Alternate protein names: Membrane-bound protein lytR [H]

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MAPTKRERRFRFLTPLIGMGIALVGGLGFGAIAVEPLLLRLSGSSTSLGAHQLQQVLAPVPQEVLLLGTDAEGLRTDVIA
SLHLTGEGAHLTQIPRDTFIRSSQHGEQKVNALYAFGGIKAISAGAEELIGRPMPHYIVLNLETLRELGDALGGLEMTVA
KQMRYSDRSQNLEIDLLPGHQRLRGRALEGYLRFRNDGEGDLGRMRRQRQAVDALMGQLATAEAMAKLPQLLRIANDNIK
TNLNLFQLAGLAKVVAGQQLSASSLPGYLGYRNGISYWFVTNPERSL

Sequences:

>Translated_287_residues
MAPTKRERRFRFLTPLIGMGIALVGGLGFGAIAVEPLLLRLSGSSTSLGAHQLQQVLAPVPQEVLLLGTDAEGLRTDVIA
SLHLTGEGAHLTQIPRDTFIRSSQHGEQKVNALYAFGGIKAISAGAEELIGRPMPHYIVLNLETLRELGDALGGLEMTVA
KQMRYSDRSQNLEIDLLPGHQRLRGRALEGYLRFRNDGEGDLGRMRRQRQAVDALMGQLATAEAMAKLPQLLRIANDNIK
TNLNLFQLAGLAKVVAGQQLSASSLPGYLGYRNGISYWFVTNPERSL
>Mature_286_residues
APTKRERRFRFLTPLIGMGIALVGGLGFGAIAVEPLLLRLSGSSTSLGAHQLQQVLAPVPQEVLLLGTDAEGLRTDVIAS
LHLTGEGAHLTQIPRDTFIRSSQHGEQKVNALYAFGGIKAISAGAEELIGRPMPHYIVLNLETLRELGDALGGLEMTVAK
QMRYSDRSQNLEIDLLPGHQRLRGRALEGYLRFRNDGEGDLGRMRRQRQAVDALMGQLATAEAMAKLPQLLRIANDNIKT
NLNLFQLAGLAKVVAGQQLSASSLPGYLGYRNGISYWFVTNPERSL

Specific function: Attenuator role for operon expression [H]

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 31259; Mature: 31127

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPTKRERRFRFLTPLIGMGIALVGGLGFGAIAVEPLLLRLSGSSTSLGAHQLQQVLAPV
CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEECCCCCCCCHHHHHHHHCCC
PQEVLLLGTDAEGLRTDVIASLHLTGEGAHLTQIPRDTFIRSSQHGEQKVNALYAFGGIK
CCCEEEECCCCCCHHHHHEEEEEECCCCCEEHHCCHHHHHCCCCCHHHHHHHHHHHCCHH
AISAGAEELIGRPMPHYIVLNLETLRELGDALGGLEMTVAKQMRYSDRSQNLEIDLLPGH
HHHCCHHHHHCCCCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEECCH
QRLRGRALEGYLRFRNDGEGDLGRMRRQRQAVDALMGQLATAEAMAKLPQLLRIANDNIK
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TNLNLFQLAGLAKVVAGQQLSASSLPGYLGYRNGISYWFVTNPERSL
CCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCEEEEEECCCCCC
>Mature Secondary Structure 
APTKRERRFRFLTPLIGMGIALVGGLGFGAIAVEPLLLRLSGSSTSLGAHQLQQVLAPV
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEECCCCCCCCHHHHHHHHCCC
PQEVLLLGTDAEGLRTDVIASLHLTGEGAHLTQIPRDTFIRSSQHGEQKVNALYAFGGIK
CCCEEEECCCCCCHHHHHEEEEEECCCCCEEHHCCHHHHHCCCCCHHHHHHHHHHHCCHH
AISAGAEELIGRPMPHYIVLNLETLRELGDALGGLEMTVAKQMRYSDRSQNLEIDLLPGH
HHHCCHHHHHCCCCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEECCH
QRLRGRALEGYLRFRNDGEGDLGRMRRQRQAVDALMGQLATAEAMAKLPQLLRIANDNIK
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TNLNLFQLAGLAKVVAGQQLSASSLPGYLGYRNGISYWFVTNPERSL
CCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA