| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is paaY [C]
Identifier: 148242638
GI number: 148242638
Start: 1357443
End: 1357943
Strand: Direct
Name: paaY [C]
Synonym: SynRCC307_1539
Alternate gene names: 148242638
Gene position: 1357443-1357943 (Clockwise)
Preceding gene: 148242636
Following gene: 148242639
Centisome position: 61.01
GC content: 67.66
Gene sequence:
>501_bases ATGAGCTCTGCTCCCTGGCCTCAGCCCAACCTCCGCAACGCCGCCTGGGTGGCACCGAGCGCTGTGGTGATTGGTGATGT TCAGCTGGAGGCAGGCGCCAGCCTCTGGCCCACCGCCGTGGCCCGTGGGGACCTCGCCAGCATCCGCATTGGCGAAGGCA GCAATGTTCAAGACGGGGCCGTGCTGCACGGCGATCCAGGTGATCCGGTGCTGATTGGCCGCGATGTGACCATCGGCCAC CGGGCCGTCATCCATGGCGCCACCCTCAACGACGGCTGCCTCATCGGCATCGGCGCCATCGTTCTCAATGGCGTGACCGT GGGGGCCGGCGCCCTGGTGGCAGCTGGGGCTGTGGTGACCAAAGATGTGCCGGCCGGCGCCCTGGTGATGGGCGCACCAG CAGCGGTCAAGCGAGAACTCAGTTCTGACGCGGTAGCCGGCCAACGCAGCCATGCCCAGCACTACCGCCAGCTCGCTGAA CAGCACGCGGCTTTGGGCTGA
Upstream 100 bases:
>100_bases CAGGACCAGCCGGTTAAAAGCCGGATGCTCTACCGCTGAGCTAGCGACCCGTGCCCCAAGGGGCGAAACCGAAAATTATC ACGCGCACCACCCCAGCCCC
Downstream 100 bases:
>100_bases GTTGCCAGCGAATTGCTGCAAAAGGCAAAAGGCCTTCCAGCAACTGCGGATTATTCCGTAGGATCAGCGCCGTTTTGTGC TGCTAGCCCATGGATCTCCG
Product: carbonic anhydrase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MSSAPWPQPNLRNAAWVAPSAVVIGDVQLEAGASLWPTAVARGDLASIRIGEGSNVQDGAVLHGDPGDPVLIGRDVTIGH RAVIHGATLNDGCLIGIGAIVLNGVTVGAGALVAAGAVVTKDVPAGALVMGAPAAVKRELSSDAVAGQRSHAQHYRQLAE QHAALG
Sequences:
>Translated_166_residues MSSAPWPQPNLRNAAWVAPSAVVIGDVQLEAGASLWPTAVARGDLASIRIGEGSNVQDGAVLHGDPGDPVLIGRDVTIGH RAVIHGATLNDGCLIGIGAIVLNGVTVGAGALVAAGAVVTKDVPAGALVMGAPAAVKRELSSDAVAGQRSHAQHYRQLAE QHAALG >Mature_165_residues SSAPWPQPNLRNAAWVAPSAVVIGDVQLEAGASLWPTAVARGDLASIRIGEGSNVQDGAVLHGDPGDPVLIGRDVTIGHR AVIHGATLNDGCLIGIGAIVLNGVTVGAGALVAAGAVVTKDVPAGALVMGAPAAVKRELSSDAVAGQRSHAQHYRQLAEQ HAALG
Specific function: Unknown
COG id: COG0663
COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-class carbonic anhydrase family [H]
Homologues:
Organism=Escherichia coli, GI87082240, Length=167, Percent_Identity=35.3293413173653, Blast_Score=112, Evalue=1e-26, Organism=Escherichia coli, GI1787667, Length=152, Percent_Identity=36.8421052631579, Blast_Score=109, Evalue=9e-26, Organism=Escherichia coli, GI87081681, Length=152, Percent_Identity=33.5526315789474, Blast_Score=94, Evalue=5e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16590; Mature: 16459
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSAPWPQPNLRNAAWVAPSAVVIGDVQLEAGASLWPTAVARGDLASIRIGEGSNVQDGA CCCCCCCCCCCCCCEEECCCEEEEEEEEECCCCCCCCHHHCCCCEEEEEECCCCCCCCCE VLHGDPGDPVLIGRDVTIGHRAVIHGATLNDGCLIGIGAIVLNGVTVGAGALVAAGAVVT EEECCCCCCEEEECCCCCCCEEEEECCCCCCCEEEEEHHHHHCCCCCCCHHHHHCCCCEE KDVPAGALVMGAPAAVKRELSSDAVAGQRSHAQHYRQLAEQHAALG CCCCCCEEEECCCHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SSAPWPQPNLRNAAWVAPSAVVIGDVQLEAGASLWPTAVARGDLASIRIGEGSNVQDGA CCCCCCCCCCCCCEEECCCEEEEEEEEECCCCCCCCHHHCCCCEEEEEECCCCCCCCCE VLHGDPGDPVLIGRDVTIGHRAVIHGATLNDGCLIGIGAIVLNGVTVGAGALVAAGAVVT EEECCCCCCEEEECCCCCCCEEEEECCCCCCCEEEEEHHHHHCCCCCCCHHHHHCCCCEE KDVPAGALVMGAPAAVKRELSSDAVAGQRSHAQHYRQLAEQHAALG CCCCCCEEEECCCHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]