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The map label for this gene is pbsY [H]

Identifier: 148242639

GI number: 148242639

Start: 1358033

End: 1358155

Strand: Direct

Name: pbsY [H]

Synonym: SynRCC307_1540

Alternate gene names: 148242639

Gene position: 1358033-1358155 (Clockwise)

Preceding gene: 148242638

Following gene: 148242640

Centisome position: 61.04

GC content: 61.79

Gene sequence:

>123_bases
ATGGATCTCCGGCTCGTCCTGGTCGCCTCTCCGATCCTGCTGGCTGTGGGTTGGGCTGGTTTCAACATCGGTCGTGCCGC
AGTTGGCCAGCTGCAGCTCATGCTGAAGAGAGCACGCGGTTGA

Upstream 100 bases:

>100_bases
CTTTGGGCTGAGTTGCCAGCGAATTGCTGCAAAAGGCAAAAGGCCTTCCAGCAACTGCGGATTATTCCGTAGGATCAGCG
CCGTTTTGTGCTGCTAGCCC

Downstream 100 bases:

>100_bases
GCCGTTGAACGTTTTGGTGATCGGAGCCGGTCTCGCCGGCTCCGAAGCCGCCTGGCAGGTGGCTCAAGCAGGACTTCCGG
TCACCTTGGTGGAGATGCGG

Product: photosystem II protein Y

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 40; Mature: 40

Protein sequence:

>40_residues
MDLRLVLVASPILLAVGWAGFNIGRAAVGQLQLMLKRARG

Sequences:

>Translated_40_residues
MDLRLVLVASPILLAVGWAGFNIGRAAVGQLQLMLKRARG
>Mature_40_residues
MDLRLVLVASPILLAVGWAGFNIGRAAVGQLQLMLKRARG

Specific function: Manganese-binding polypeptide with L-arginine metabolizing enzyme activity. Component of the core of photosystem II [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009388 [H]

Pfam domain/function: PF06298 PsbY [H]

EC number: NA

Molecular weight: Translated: 4276; Mature: 4276

Theoretical pI: Translated: 12.51; Mature: 12.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLRLVLVASPILLAVGWAGFNIGRAAVGQLQLMLKRARG
CCEEEEEECCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDLRLVLVASPILLAVGWAGFNIGRAAVGQLQLMLKRARG
CCEEEEEECCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA