| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242627
Identifier: 148242627
GI number: 148242627
Start: 1352244
End: 1352549
Strand: Direct
Name: 148242627
Synonym: SynRCC307_1528
Alternate gene names: NA
Gene position: 1352244-1352549 (Clockwise)
Preceding gene: 148242626
Following gene: 148242631
Centisome position: 60.78
GC content: 57.84
Gene sequence:
>306_bases TTGGGAAGAGCTCCTGGGTCGCAAGTGAATCCAAAGCAAGCCCTTGTCTTACTGGCGAGTTGGAGCTTGCTCTTGAGTGG CCTTGCCGCTTGTTCAACTGCTGATCAAAACGACATCAGCGCAGCCGATGCACAGGCCCATGCCGACAGCATCTGCTTAA CCAGTCAGCAGCTTGATCGCGACAGCGCACAGTTGATGGCGGACATGGCTGATGCGATGGCCGCGGAACCGGGAGTCAAA GATCAACCGACACGGACGGCGATCGCTGGTACGGCAATCGCCCGATCACGCGGCTGCGTGGATTAA
Upstream 100 bases:
>100_bases GCTATTTGAGCCAGCCTAAAACCAAAAAAGAAAAGAGCTTTGCCCCAACCGCAACGACCAAGCGATCGGCAGCCGTGAAA ACCCCCAGCGCAGATTTGAA
Downstream 100 bases:
>100_bases ATCAGCTTTTGCACTGAATGGATTGACGCCCTGTGCCCTGAGAGAAGTCCAAGCTGTAGGGCGCCGGCACCTTGGCAATC AGCCAACTCTCGCCGAAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MGRAPGSQVNPKQALVLLASWSLLLSGLAACSTADQNDISAADAQAHADSICLTSQQLDRDSAQLMADMADAMAAEPGVK DQPTRTAIAGTAIARSRGCVD
Sequences:
>Translated_101_residues MGRAPGSQVNPKQALVLLASWSLLLSGLAACSTADQNDISAADAQAHADSICLTSQQLDRDSAQLMADMADAMAAEPGVK DQPTRTAIAGTAIARSRGCVD >Mature_100_residues GRAPGSQVNPKQALVLLASWSLLLSGLAACSTADQNDISAADAQAHADSICLTSQQLDRDSAQLMADMADAMAAEPGVKD QPTRTAIAGTAIARSRGCVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10327; Mature: 10195
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRAPGSQVNPKQALVLLASWSLLLSGLAACSTADQNDISAADAQAHADSICLTSQQLDR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCH DSAQLMADMADAMAAEPGVKDQPTRTAIAGTAIARSRGCVD HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure GRAPGSQVNPKQALVLLASWSLLLSGLAACSTADQNDISAADAQAHADSICLTSQQLDR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCH DSAQLMADMADAMAAEPGVKDQPTRTAIAGTAIARSRGCVD HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA