| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242626
Identifier: 148242626
GI number: 148242626
Start: 1352113
End: 1352271
Strand: Direct
Name: 148242626
Synonym: SynRCC307_1527
Alternate gene names: NA
Gene position: 1352113-1352271 (Clockwise)
Preceding gene: 148242625
Following gene: 148242627
Centisome position: 60.77
GC content: 54.09
Gene sequence:
>159_bases ATGAGCCAGTCACACTGGGCTGTGCTGGACGGCTATTTGAGCCAGCCTAAAACCAAAAAAGAAAAGAGCTTTGCCCCAAC CGCAACGACCAAGCGATCGGCAGCCGTGAAAACCCCCAGCGCAGATTTGAATTGGGAAGAGCTCCTGGGTCGCAAGTGA
Upstream 100 bases:
>100_bases GCAAGGATTTTGAAATCCAAACAAAGTCAACCAATTGGTGTTTTAAAACACCCTTTTTTGGTTGTTAGACATTAAAAATT AAAAACCCCATCACCCAACC
Downstream 100 bases:
>100_bases ATCCAAAGCAAGCCCTTGTCTTACTGGCGAGTTGGAGCTTGCTCTTGAGTGGCCTTGCCGCTTGTTCAACTGCTGATCAA AACGACATCAGCGCAGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 52; Mature: 51
Protein sequence:
>52_residues MSQSHWAVLDGYLSQPKTKKEKSFAPTATTKRSAAVKTPSADLNWEELLGRK
Sequences:
>Translated_52_residues MSQSHWAVLDGYLSQPKTKKEKSFAPTATTKRSAAVKTPSADLNWEELLGRK >Mature_51_residues SQSHWAVLDGYLSQPKTKKEKSFAPTATTKRSAAVKTPSADLNWEELLGRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5791; Mature: 5659
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSHWAVLDGYLSQPKTKKEKSFAPTATTKRSAAVKTPSADLNWEELLGRK CCCCCCCEECHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCC >Mature Secondary Structure SQSHWAVLDGYLSQPKTKKEKSFAPTATTKRSAAVKTPSADLNWEELLGRK CCCCCCEECHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA