| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is cbbY [H]
Identifier: 148242585
GI number: 148242585
Start: 1323133
End: 1323825
Strand: Direct
Name: cbbY [H]
Synonym: SynRCC307_1486
Alternate gene names: 148242585
Gene position: 1323133-1323825 (Clockwise)
Preceding gene: 148242571
Following gene: 148242586
Centisome position: 59.47
GC content: 65.8
Gene sequence:
>693_bases ATGCCCCGCCTGCAAGCCCTGCTCTGGGACGTGGACGGCACCTTGGCTGACACCGAGCAGCAGGGTCATCGGCCAGCCTT CAATGCCGCCTTCGCCGCCGCGGGACTGCCGTGGCACTGGGACACCAGCACCTACCAGCGGCTGTTGCACACCAGCGGTG GACGCGAGCGGATCCTGGCCTGGATGGCTGAGGTGGCTCAGCGCGATGAGGGCCTTGCCGCCGAGCTACACCGCAGCAAA CAACAGCACTACAGCGAGCTATTGCGCCGGGGCAGCGTCCCATTGCGTCCTGGCGTCTTGGCCTTGGCCTGCGAAGCGGC GGCAGCTGGGCTGCAGCAATGGATTGTCACCACCAGTGGGCGCGCTGCCGTGGCGGCGCTGCTCCACAACACACCGGAGC TGGAGGCCTGTTTTGGCGGCTGGATTTGCGGCAACGACGTGCAACGCAAAAAACCAGATCCAGAGGCTTACATCCTCGCC CTGGAGCACTTGAAGTTGCCGGCCTGCGAGGTCCTCGCCATTGAGGATTCACCCCAAGGCCTCGCCGCTGCCAAGGGCGC TGGGCTTGAGGTGGTGATCACCACAGACAACTGGAGCGGCGGCGCCACAGCCCTTGCCGAGGCCGCTTTGGTGGTGGAGC ATCTCAGCCAGGGGCCTGTGACCCTCAAGCAGCTCAGCGCCCTGTTGCCATGA
Upstream 100 bases:
>100_bases GGGGGAGAGGCAGCGGTGGCAACGGGGCCGGTAACTGCCAATGGGGAGCCGAAGAGGTGCTGATGGGAGCCGCCTAGGGT TCGCGCAATTCCACTGCATG
Downstream 100 bases:
>100_bases CCCAACCGCCGCTGCAAAACACCCGGTTTAATCAGCTGCAAACCACCGTTGGCGAACGCCTGCTCGGCTGGGTCACCAGA CGCTGGCGCGACAAAAGCGT
Product: putative CbbY homolog (potential phosphonatase)
Products: Glycolate; Phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MPRLQALLWDVDGTLADTEQQGHRPAFNAAFAAAGLPWHWDTSTYQRLLHTSGGRERILAWMAEVAQRDEGLAAELHRSK QQHYSELLRRGSVPLRPGVLALACEAAAAGLQQWIVTTSGRAAVAALLHNTPELEACFGGWICGNDVQRKKPDPEAYILA LEHLKLPACEVLAIEDSPQGLAAAKGAGLEVVITTDNWSGGATALAEAALVVEHLSQGPVTLKQLSALLP
Sequences:
>Translated_230_residues MPRLQALLWDVDGTLADTEQQGHRPAFNAAFAAAGLPWHWDTSTYQRLLHTSGGRERILAWMAEVAQRDEGLAAELHRSK QQHYSELLRRGSVPLRPGVLALACEAAAAGLQQWIVTTSGRAAVAALLHNTPELEACFGGWICGNDVQRKKPDPEAYILA LEHLKLPACEVLAIEDSPQGLAAAKGAGLEVVITTDNWSGGATALAEAALVVEHLSQGPVTLKQLSALLP >Mature_229_residues PRLQALLWDVDGTLADTEQQGHRPAFNAAFAAAGLPWHWDTSTYQRLLHTSGGRERILAWMAEVAQRDEGLAAELHRSKQ QHYSELLRRGSVPLRPGVLALACEAAAAGLQQWIVTTSGRAAVAALLHNTPELEACFGGWICGNDVQRKKPDPEAYILAL EHLKLPACEVLAIEDSPQGLAAAKGAGLEVVITTDNWSGGATALAEAALVVEHLSQGPVTLKQLSALLP
Specific function: Unknown
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: 3.1.3.18 [C]
Molecular weight: Translated: 24628; Mature: 24497
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLQALLWDVDGTLADTEQQGHRPAFNAAFAAAGLPWHWDTSTYQRLLHTSGGRERILA CCCHHEEEECCCCCEECCHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHH WMAEVAQRDEGLAAELHRSKQQHYSELLRRGSVPLRPGVLALACEAAAAGLQQWIVTTSG HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC RAAVAALLHNTPELEACFGGWICGNDVQRKKPDPEAYILALEHLKLPACEVLAIEDSPQG HHHHHHHHHCCCCHHHHHCCCEECCCCCCCCCCCHHEEEEHHHCCCCCEEEEEECCCCCC LAAAKGAGLEVVITTDNWSGGATALAEAALVVEHLSQGPVTLKQLSALLP HHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCC >Mature Secondary Structure PRLQALLWDVDGTLADTEQQGHRPAFNAAFAAAGLPWHWDTSTYQRLLHTSGGRERILA CCHHEEEECCCCCEECCHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHH WMAEVAQRDEGLAAELHRSKQQHYSELLRRGSVPLRPGVLALACEAAAAGLQQWIVTTSG HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC RAAVAALLHNTPELEACFGGWICGNDVQRKKPDPEAYILALEHLKLPACEVLAIEDSPQG HHHHHHHHHCCCCHHHHHCCCEECCCCCCCCCCCHHEEEEHHHCCCCCEEEEEECCCCCC LAAAKGAGLEVVITTDNWSGGATALAEAALVVEHLSQGPVTLKQLSALLP HHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Mg2+ [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.57 {phosphoglycolate}} [C]
Substrates: D-Glycerate 2-phosphatelyc; H2O [C]
Specific reaction: D-Glycerate 2-phosphatelyc + H2O --> Glycolate + Phosphate [C]
General reaction: Additional information:
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA