| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242586
Identifier: 148242586
GI number: 148242586
Start: 1323822
End: 1324166
Strand: Direct
Name: 148242586
Synonym: SynRCC307_1487
Alternate gene names: NA
Gene position: 1323822-1324166 (Clockwise)
Preceding gene: 148242585
Following gene: 148242588
Centisome position: 59.5
GC content: 58.84
Gene sequence:
>345_bases ATGACCCAACCGCCGCTGCAAAACACCCGGTTTAATCAGCTGCAAACCACCGTTGGCGAACGCCTGCTCGGCTGGGTCAC CAGACGCTGGCGCGACAAAAGCGTTGCGCTGATCGCCCTGTTTGCCGGTGGATACACAGCAGCCAACGTCACCACGCTCT ACCTCAGCCTGCTGAAGGTGCAGAGCCTGGGCGCGCTGGGGCTGCTGTTGTTTTTTGAAGTCCTGATCCGGCTGCGCCAG CGTTACGCCGGCCAGCAGCCTGGATTGGCCTGGATTGCGATCGACAACTTCCGGATCGGGTTTCTCTACCTGATCGTTTT AGAAGCGTTCAAGATCGGCAGTTAA
Upstream 100 bases:
>100_bases ACTGGAGCGGCGGCGCCACAGCCCTTGCCGAGGCCGCTTTGGTGGTGGAGCATCTCAGCCAGGGGCCTGTGACCCTCAAG CAGCTCAGCGCCCTGTTGCC
Downstream 100 bases:
>100_bases CTCAGGATTCAGCCTCGCCGTCCTCTTCAGGCATCGGGTAAACGAAACCTTGGGCACGGCCACTGAGAACGGCCTTACCA GCCGACAACGCCTTGCGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MTQPPLQNTRFNQLQTTVGERLLGWVTRRWRDKSVALIALFAGGYTAANVTTLYLSLLKVQSLGALGLLLFFEVLIRLRQ RYAGQQPGLAWIAIDNFRIGFLYLIVLEAFKIGS
Sequences:
>Translated_114_residues MTQPPLQNTRFNQLQTTVGERLLGWVTRRWRDKSVALIALFAGGYTAANVTTLYLSLLKVQSLGALGLLLFFEVLIRLRQ RYAGQQPGLAWIAIDNFRIGFLYLIVLEAFKIGS >Mature_113_residues TQPPLQNTRFNQLQTTVGERLLGWVTRRWRDKSVALIALFAGGYTAANVTTLYLSLLKVQSLGALGLLLFFEVLIRLRQR YAGQQPGLAWIAIDNFRIGFLYLIVLEAFKIGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12872; Mature: 12741
Theoretical pI: Translated: 11.11; Mature: 11.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPPLQNTRFNQLQTTVGERLLGWVTRRWRDKSVALIALFAGGYTAANVTTLYLSLLKV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHH QSLGALGLLLFFEVLIRLRQRYAGQQPGLAWIAIDNFRIGFLYLIVLEAFKIGS HHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure TQPPLQNTRFNQLQTTVGERLLGWVTRRWRDKSVALIALFAGGYTAANVTTLYLSLLKV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHH QSLGALGLLLFFEVLIRLRQRYAGQQPGLAWIAIDNFRIGFLYLIVLEAFKIGS HHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA