| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is gpt [C]
Identifier: 148242560
GI number: 148242560
Start: 1298162
End: 1298710
Strand: Direct
Name: gpt [C]
Synonym: SynRCC307_1461
Alternate gene names: 148242560
Gene position: 1298162-1298710 (Clockwise)
Preceding gene: 148242559
Following gene: 148242561
Centisome position: 58.35
GC content: 62.66
Gene sequence:
>549_bases ATGACAGCACTGCCCCAGCTCAAGCCCCCGGCCATCAGCGACAACACCGCTGGTGAGCTGGTGGTGAGCTGGGAGCAATA CCACCGGCTGATCGAGCACCTGGCGCTGCAACTGCATCAAGCCGCAGCGGATTTTGATCAGATCGTGGCCCTCTCCCGCG GCGGTTTGCGGGTGGGTGATCTGCTCTCCCGTCTGTTCGATCGGCCCTTGGTGGTGATGGCGGCCAGCAGCTACAGCGGC GATGGCGATCGCATTCAGGGCCAACTGAAGCTCGGCCATCAACTGGCCCACACCTGCGACCAGCTAGGGCCTCGGCTGCT GCTGGTGGACGACTTGGTGGATAGCGGCACCACCTTGGTGGAGGCCAGCGCCTGGCTCAACACAGAAGTGAGGCCATCCC AACTGCTCACGGGGGTGCTGTGGCTCAAAGGCGGCAGCAGCTTTCAACCAGATTTCTGGGCCATGCATCTACCCGAAAAC CCCTGGATCGTGCAGCCATTTGAGCGCTGGGAGCTGCTGCACCCCGGCGAACTCGAACCCATGAGCTAA
Upstream 100 bases:
>100_bases TGCTGCGCTTTGGCTCCCGCGCTCCGGGCGCGCCCCAAGAGCTCACGCTCGCGGACATGCAGGATGTTCGTCGCAGACTG GATCGGAAGGACTGGCCGCA
Downstream 100 bases:
>100_bases TGGTCTATGCCATGGTTTTGCGCAGACCTTGGCCCGCTCCATGACCGGCACCCTGGCCCCCACCACCTTGAGCGACACCG ATTGGAGCCAGGATCCGCGC
Product: phosphoribosyltransferase
Products: Diphosphate; Xanthosine 5'-phosphate [C]
Alternate protein names: Transferase; Xanthine-Guanine Phosphoribosyltransferase; Purine Phosphoribosyltransferase; Nucleotide Phosphoribosyltransferase; Phosphoribosyl Transferase Domain Protein; Xanthine Phosphoribosyltransferase; Phosphoribosyl Transferase Domain-Containing Protein; Phosphoribosyl Transferase Domain-Containing
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MTALPQLKPPAISDNTAGELVVSWEQYHRLIEHLALQLHQAAADFDQIVALSRGGLRVGDLLSRLFDRPLVVMAASSYSG DGDRIQGQLKLGHQLAHTCDQLGPRLLLVDDLVDSGTTLVEASAWLNTEVRPSQLLTGVLWLKGGSSFQPDFWAMHLPEN PWIVQPFERWELLHPGELEPMS
Sequences:
>Translated_182_residues MTALPQLKPPAISDNTAGELVVSWEQYHRLIEHLALQLHQAAADFDQIVALSRGGLRVGDLLSRLFDRPLVVMAASSYSG DGDRIQGQLKLGHQLAHTCDQLGPRLLLVDDLVDSGTTLVEASAWLNTEVRPSQLLTGVLWLKGGSSFQPDFWAMHLPEN PWIVQPFERWELLHPGELEPMS >Mature_181_residues TALPQLKPPAISDNTAGELVVSWEQYHRLIEHLALQLHQAAADFDQIVALSRGGLRVGDLLSRLFDRPLVVMAASSYSGD GDRIQGQLKLGHQLAHTCDQLGPRLLLVDDLVDSGTTLVEASAWLNTEVRPSQLLTGVLWLKGGSSFQPDFWAMHLPENP WIVQPFERWELLHPGELEPMS
Specific function: Acts On Guanine, Xanthine And To A Lesser Extent Hypoxanthine. [C]
COG id: COG2236
COG function: function code R; Predicted phosphoribosyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.4.2.22 [C]
Molecular weight: Translated: 20190; Mature: 20059
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALPQLKPPAISDNTAGELVVSWEQYHRLIEHLALQLHQAAADFDQIVALSRGGLRVGD CCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH LLSRLFDRPLVVMAASSYSGDGDRIQGQLKLGHQLAHTCDQLGPRLLLVDDLVDSGTTLV HHHHHHCCCEEEEEECCCCCCCHHEEHHHHHHHHHHHHHHHHCCEEEEEEHHHCCCCEEE EASAWLNTEVRPSQLLTGVLWLKGGSSFQPDFWAMHLPENPWIVQPFERWELLHPGELEP EHHHHCCCCCCHHHHHHHHEEECCCCCCCCCEEEEECCCCCCEECCHHHCCCCCCCCCCC MS CC >Mature Secondary Structure TALPQLKPPAISDNTAGELVVSWEQYHRLIEHLALQLHQAAADFDQIVALSRGGLRVGD CCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH LLSRLFDRPLVVMAASSYSGDGDRIQGQLKLGHQLAHTCDQLGPRLLLVDDLVDSGTTLV HHHHHHCCCEEEEEECCCCCCCHHEEHHHHHHHHHHHHHHHHCCEEEEEEHHHCCCCEEE EASAWLNTEVRPSQLLTGVLWLKGGSSFQPDFWAMHLPENPWIVQPFERWELLHPGELEP EHHHHCCCCCCHHHHHHHHEEECCCCCCCCCEEEEECCCCCCEECCHHHCCCCCCCCCCC MS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.053 {5-phospho-alpha-D-ribose} 0.02 {xanthine}} [C]
Substrates: 5-Phospho-alpha-D-ribose 1-diphosphate; Xanthine [C]
Specific reaction: 5-Phospho-alpha-D-ribose 1-diphosphate + Xanthine --> Diphosphate + Xanthosine 5'-phosphate [C]
General reaction: Glycosyl and Pentosyl group transfer [C]
Inhibitor: 2-Thioxanthine; 6-Thioxanthine; 8-Mercaptoxanthine; ATP; CDP; CTP; GDP; GMP; GTP; TDP; TTP; UDP; UTP; Xanthine; XDP; XMP; XTP [C]
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA