| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is htpG [H]
Identifier: 148242470
GI number: 148242470
Start: 1216612
End: 1218516
Strand: Direct
Name: htpG [H]
Synonym: SynRCC307_1371
Alternate gene names: 148242470
Gene position: 1216612-1218516 (Clockwise)
Preceding gene: 148242469
Following gene: 148242472
Centisome position: 54.68
GC content: 59.21
Gene sequence:
>1905_bases ATGTCGGTGCTTGAGCAAGGCCAGATCCAGATCCATACCGAAAACATCTTCCCGATCATCAAGAAGGCCGTTTACAGCGG CCACGAGGTGTTTTTGCGTGAATTGGTCAGCAACGGCACCGATGCGATCAGCAAGCGCCGAATGGCGGCCATGGCTGGTG ATTGCAGCGAAGGCAGCGACGGACTGATCAGCATCAAGATCGATCGCGAAGCCAAAACCCTCACCATCAGCGACAACGGC ATCGGCATGAACGCCGATGAGGTGAAGCGCTACATCAACCAGGTGGCCTTCTCCAGCGCCGAGGAATTCCTGGAGAAGTA CAAGAGCGAAGACGACGCCATCATTGGCCACTTTGGCCTGGGCTTTTATTCGAGCTTCATGGTGGCCAGCCAGGTTGAGC TGGTGAGCTTGAGCGCTCGCCCCAACGCTGAAGCGGTCCGCTGGAGCTGCGATGGCTCACCGAATTTCAGCCTCGAAGCC GCTGAGCGCAGCGAACCCGGCACCGATGTGATCCTGCACCTGCAGGAGGAGGAGCTCGAGTACATCGAGCCCGCCCGGAT TCGCACCTTGATCAACACCTACTGCGACTTCATGCCGGTGGAGGTGCAGCTGGAAGGGGAGACGGTCAACAAGCGCGAAG CCCCCTGGCGCAAGAGTCCCCGGGAGCTCAGCGATGAGGACTACATCGAGCTGTACCGCTACCTCTATCCATTCCAAGGC GATCCCCTGCTGTGGGTTCACCTCAACACCGATTACCCCTACAACCTGCAAGGCATCCTCTATTTCCCAAAATCCACCGG CCGCGCTGATTGGGAAAAGGGCGAAATCAAGCTGTACTGCAATCAGGTCTTTGTCAGCGACTCCATCAAGGAGGTGGTGC CGAAGTATCTGCTGCCCTTGCGCGGGGTGATCGATTCACCCGATATCCCACTCAACGTGAGCCGCTCGGCGCTGCAGACC GATCGCCGGGTGCGCTCCATCGGCGGCTTTGTGGCCAAGAAGGTGGGCGACCGGTTGAAGCAGCTGCATCGTGATGAGCC CAAGCGCTATGCCGAAATTTGGGAGTCGTTGGCTCCCTTCATCAAGATCGGCGCCATGGAGGATGAGAAGTTTGCTGATC AAGTCGCCGAGCTGGTGTTGTTTGGCACCACCGCAGCGGCAGGCGAAGGCGAAACCCCCGATCCGGTCGCAGCTGAAGAC GGCAAGCGATTTACCACCCTGGGGGGTTACCGCTCACGGCTCAGCGCCGATAACGACAAGCGCATCCTTTATTGCACCGA TGAGGCCGGGCAGGCCGGGGCCTTGGCGCTCTGGCAAGGGCAAGGCGCTGAAGTGCTGCTGGCTGACACCTTCATCGACA CACAGTTCATTCCTTGGCTGGAATACCGCCACGAGGAGTTGAAGTTCCAGCGGGTGGATGCCGAGCTGGATGATTCTCTG CAAGACAAAGACAGCGGCGTTACCGATGCTGAAGGCAAAGACAGCAGTGAAAGCCTGCGGGATCTGTTTAAGGCCTCACT GGATAACGACAAAGTCACCATCCAGGTGCAGGCTCTCAAGGGTGACAACGCCCCGGCTGCGTTGATCCTGCTGCCAGAGC AAATGCGCCGCATGAACGACATGGGCGCCCTGATGGAGCAACGCCTCCCGGGCCTGCCTGATCACCACGTGCTGCTGATC AACCGCCGGCACCGGTTGGTCGAAGGCATGCAAAAGCTGGCCGCTGGATCTGTGATTGCCGGCGGGGGCGCGAGCTCGCC GAGCCAACAACTCGCCGAGCAACTCAGCCGCCATGTCTATGAAATGGCCAAGCTTTCGGTTGGAGGATTGGAGCCCAATG AATTGGCCGGCTTCCAACAGCGAAGCTGCGACCTGATGGGTGAGCTGATGAACCGGGGGCTTTAA
Upstream 100 bases:
>100_bases AACCAGCAACTGAGTCACTGGTTCGGGCTTCACACCACTGCAGCCATTGAGCGGGTCGCCCTCCTGTTCCTAGGGTCGTG GACCCCAATTCAGACGGCGC
Downstream 100 bases:
>100_bases GCCCCTGGGCTCAGACCGAAGCGGCGCGGCGCTTGAGATACCACTGCAGCATCGAAGGGTGCTGCAGTTGGAAACCCAAG TCTTTCAACGACTCATTCGA
Product: heat shock protein 90
Products: NA
Alternate protein names: Heat shock protein htpG; High temperature protein G [H]
Number of amino acids: Translated: 634; Mature: 633
Protein sequence:
>634_residues MSVLEQGQIQIHTENIFPIIKKAVYSGHEVFLRELVSNGTDAISKRRMAAMAGDCSEGSDGLISIKIDREAKTLTISDNG IGMNADEVKRYINQVAFSSAEEFLEKYKSEDDAIIGHFGLGFYSSFMVASQVELVSLSARPNAEAVRWSCDGSPNFSLEA AERSEPGTDVILHLQEEELEYIEPARIRTLINTYCDFMPVEVQLEGETVNKREAPWRKSPRELSDEDYIELYRYLYPFQG DPLLWVHLNTDYPYNLQGILYFPKSTGRADWEKGEIKLYCNQVFVSDSIKEVVPKYLLPLRGVIDSPDIPLNVSRSALQT DRRVRSIGGFVAKKVGDRLKQLHRDEPKRYAEIWESLAPFIKIGAMEDEKFADQVAELVLFGTTAAAGEGETPDPVAAED GKRFTTLGGYRSRLSADNDKRILYCTDEAGQAGALALWQGQGAEVLLADTFIDTQFIPWLEYRHEELKFQRVDAELDDSL QDKDSGVTDAEGKDSSESLRDLFKASLDNDKVTIQVQALKGDNAPAALILLPEQMRRMNDMGALMEQRLPGLPDHHVLLI NRRHRLVEGMQKLAAGSVIAGGGASSPSQQLAEQLSRHVYEMAKLSVGGLEPNELAGFQQRSCDLMGELMNRGL
Sequences:
>Translated_634_residues MSVLEQGQIQIHTENIFPIIKKAVYSGHEVFLRELVSNGTDAISKRRMAAMAGDCSEGSDGLISIKIDREAKTLTISDNG IGMNADEVKRYINQVAFSSAEEFLEKYKSEDDAIIGHFGLGFYSSFMVASQVELVSLSARPNAEAVRWSCDGSPNFSLEA AERSEPGTDVILHLQEEELEYIEPARIRTLINTYCDFMPVEVQLEGETVNKREAPWRKSPRELSDEDYIELYRYLYPFQG DPLLWVHLNTDYPYNLQGILYFPKSTGRADWEKGEIKLYCNQVFVSDSIKEVVPKYLLPLRGVIDSPDIPLNVSRSALQT DRRVRSIGGFVAKKVGDRLKQLHRDEPKRYAEIWESLAPFIKIGAMEDEKFADQVAELVLFGTTAAAGEGETPDPVAAED GKRFTTLGGYRSRLSADNDKRILYCTDEAGQAGALALWQGQGAEVLLADTFIDTQFIPWLEYRHEELKFQRVDAELDDSL QDKDSGVTDAEGKDSSESLRDLFKASLDNDKVTIQVQALKGDNAPAALILLPEQMRRMNDMGALMEQRLPGLPDHHVLLI NRRHRLVEGMQKLAAGSVIAGGGASSPSQQLAEQLSRHVYEMAKLSVGGLEPNELAGFQQRSCDLMGELMNRGL >Mature_633_residues SVLEQGQIQIHTENIFPIIKKAVYSGHEVFLRELVSNGTDAISKRRMAAMAGDCSEGSDGLISIKIDREAKTLTISDNGI GMNADEVKRYINQVAFSSAEEFLEKYKSEDDAIIGHFGLGFYSSFMVASQVELVSLSARPNAEAVRWSCDGSPNFSLEAA ERSEPGTDVILHLQEEELEYIEPARIRTLINTYCDFMPVEVQLEGETVNKREAPWRKSPRELSDEDYIELYRYLYPFQGD PLLWVHLNTDYPYNLQGILYFPKSTGRADWEKGEIKLYCNQVFVSDSIKEVVPKYLLPLRGVIDSPDIPLNVSRSALQTD RRVRSIGGFVAKKVGDRLKQLHRDEPKRYAEIWESLAPFIKIGAMEDEKFADQVAELVLFGTTAAAGEGETPDPVAAEDG KRFTTLGGYRSRLSADNDKRILYCTDEAGQAGALALWQGQGAEVLLADTFIDTQFIPWLEYRHEELKFQRVDAELDDSLQ DKDSGVTDAEGKDSSESLRDLFKASLDNDKVTIQVQALKGDNAPAALILLPEQMRRMNDMGALMEQRLPGLPDHHVLLIN RRHRLVEGMQKLAAGSVIAGGGASSPSQQLAEQLSRHVYEMAKLSVGGLEPNELAGFQQRSCDLMGELMNRGL
Specific function: Molecular chaperone. Has ATPase activity [H]
COG id: COG0326
COG function: function code O; Molecular chaperone, HSP90 family
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 90 family [H]
Homologues:
Organism=Homo sapiens, GI155722983, Length=635, Percent_Identity=27.244094488189, Blast_Score=233, Evalue=4e-61, Organism=Homo sapiens, GI4507677, Length=447, Percent_Identity=27.5167785234899, Blast_Score=178, Evalue=2e-44, Organism=Homo sapiens, GI20149594, Length=207, Percent_Identity=32.3671497584541, Blast_Score=112, Evalue=2e-24, Organism=Homo sapiens, GI153792590, Length=209, Percent_Identity=31.5789473684211, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI154146191, Length=251, Percent_Identity=27.8884462151394, Blast_Score=110, Evalue=3e-24, Organism=Escherichia coli, GI1786679, Length=591, Percent_Identity=31.3028764805415, Blast_Score=252, Evalue=6e-68, Organism=Caenorhabditis elegans, GI115535205, Length=643, Percent_Identity=28.3048211508554, Blast_Score=236, Evalue=2e-62, Organism=Caenorhabditis elegans, GI115535167, Length=401, Percent_Identity=31.6708229426434, Blast_Score=229, Evalue=2e-60, Organism=Caenorhabditis elegans, GI17542208, Length=696, Percent_Identity=25, Blast_Score=194, Evalue=1e-49, Organism=Caenorhabditis elegans, GI17559162, Length=525, Percent_Identity=25.9047619047619, Blast_Score=186, Evalue=5e-47, Organism=Saccharomyces cerevisiae, GI6323840, Length=596, Percent_Identity=26.510067114094, Blast_Score=187, Evalue=6e-48, Organism=Saccharomyces cerevisiae, GI6325016, Length=217, Percent_Identity=33.1797235023041, Blast_Score=112, Evalue=2e-25, Organism=Drosophila melanogaster, GI24586016, Length=404, Percent_Identity=32.1782178217822, Blast_Score=235, Evalue=8e-62, Organism=Drosophila melanogaster, GI21357739, Length=475, Percent_Identity=28.2105263157895, Blast_Score=185, Evalue=7e-47, Organism=Drosophila melanogaster, GI17647529, Length=433, Percent_Identity=26.3279445727483, Blast_Score=126, Evalue=4e-29,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 2419 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR019805 - InterPro: IPR001404 - InterPro: IPR020575 - InterPro: IPR020568 [H]
Pfam domain/function: PF02518 HATPase_c; PF00183 HSP90 [H]
EC number: NA
Molecular weight: Translated: 70771; Mature: 70640
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLEQGQIQIHTENIFPIIKKAVYSGHEVFLRELVSNGTDAISKRRMAAMAGDCSEGSD CCCCCCCCEEEEECHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCC GLISIKIDREAKTLTISDNGIGMNADEVKRYINQVAFSSAEEFLEKYKSEDDAIIGHFGL CEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHH GFYSSFMVASQVELVSLSARPNAEAVRWSCDGSPNFSLEAAERSEPGTDVILHLQEEELE HHHHHHHHHHCEEEEEECCCCCCCEEEEECCCCCCCEEEECCCCCCCCEEEEEEEHHHHH YIEPARIRTLINTYCDFMPVEVQLEGETVNKREAPWRKSPRELSDEDYIELYRYLYPFQG HCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC DPLLWVHLNTDYPYNLQGILYFPKSTGRADWEKGEIKLYCNQVFVSDSIKEVVPKYLLPL CCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHH RGVIDSPDIPLNVSRSALQTDRRVRSIGGFVAKKVGDRLKQLHRDEPKRYAEIWESLAPF HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH IKIGAMEDEKFADQVAELVLFGTTAAAGEGETPDPVAAEDGKRFTTLGGYRSRLSADNDK HEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHCCCCCCC RILYCTDEAGQAGALALWQGQGAEVLLADTFIDTQFIPWLEYRHEELKFQRVDAELDDSL EEEEEECCCCCCCEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHCCCH QDKDSGVTDAEGKDSSESLRDLFKASLDNDKVTIQVQALKGDNAPAALILLPEQMRRMND HHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEECHHHHHHHHH MGALMEQRLPGLPDHHVLLINRRHRLVEGMQKLAAGSVIAGGGASSPSQQLAEQLSRHVY HHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHH EMAKLSVGGLEPNELAGFQQRSCDLMGELMNRGL HHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure SVLEQGQIQIHTENIFPIIKKAVYSGHEVFLRELVSNGTDAISKRRMAAMAGDCSEGSD CCCCCCCEEEEECHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCC GLISIKIDREAKTLTISDNGIGMNADEVKRYINQVAFSSAEEFLEKYKSEDDAIIGHFGL CEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHH GFYSSFMVASQVELVSLSARPNAEAVRWSCDGSPNFSLEAAERSEPGTDVILHLQEEELE HHHHHHHHHHCEEEEEECCCCCCCEEEEECCCCCCCEEEECCCCCCCCEEEEEEEHHHHH YIEPARIRTLINTYCDFMPVEVQLEGETVNKREAPWRKSPRELSDEDYIELYRYLYPFQG HCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC DPLLWVHLNTDYPYNLQGILYFPKSTGRADWEKGEIKLYCNQVFVSDSIKEVVPKYLLPL CCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHH RGVIDSPDIPLNVSRSALQTDRRVRSIGGFVAKKVGDRLKQLHRDEPKRYAEIWESLAPF HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH IKIGAMEDEKFADQVAELVLFGTTAAAGEGETPDPVAAEDGKRFTTLGGYRSRLSADNDK HEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHCCCCCCC RILYCTDEAGQAGALALWQGQGAEVLLADTFIDTQFIPWLEYRHEELKFQRVDAELDDSL EEEEEECCCCCCCEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHCCCH QDKDSGVTDAEGKDSSESLRDLFKASLDNDKVTIQVQALKGDNAPAALILLPEQMRRMND HHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEECHHHHHHHHH MGALMEQRLPGLPDHHVLLINRRHRLVEGMQKLAAGSVIAGGGASSPSQQLAEQLSRHVY HHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHH EMAKLSVGGLEPNELAGFQQRSCDLMGELMNRGL HHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11807048 [H]