| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is ggpS [H]
Identifier: 148242472
GI number: 148242472
Start: 1219659
End: 1221125
Strand: Direct
Name: ggpS [H]
Synonym: SynRCC307_1373
Alternate gene names: 148242472
Gene position: 1219659-1221125 (Clockwise)
Preceding gene: 148242470
Following gene: 148242473
Centisome position: 54.82
GC content: 60.8
Gene sequence:
>1467_bases GTGCCGAGCTCGTTTGTTCTCGTTTACCACCGCTCACCCTTCGATGAAGTCATCGACGCGGACGGGAACCGCAGCTGGCA AGACCAAAAAAGCCCCAACGGCATCATCCCAACCCTGCGCAACCTGTTCCGAGATCACCCCTCGGGCACCTGGATTGCTT GGCGCCAAGACGAAAACAACAACGGCGAGGATGAAACAACGGTTATCGAGGAGCCACTGACGATCAGGCTCCGCCGGATT CCGCTGCAACAGCAGCAGATCTCAAGCTTCTATCACGTGACCTCAAAGGAGTCGGCCTGGCCGATCCTGCACACATTCCC CAGCCACTTCAACGTCAACAACGCCGACTGGGCCACATTCCAGGAGGTGAATCGGCGCTTTGCCGAGGCCGCTTGCAATG AAGCCGCACCGGGTGCCTGCATCTGGGTGCACGACTACAACCTATGGCTGACACCGGGATACATCCGCCAGCAACGACCG GATGTGAAGGTCGGATTCTTTCACCACACACCGTTCCCCAGCGCCGATGTGTTCGGCATCCTTCCCTGGCGAGAAGAAAT CATCAGCAGCCTGCTGGCCTGTGATGTGGTGGGTTTTCACATCCCTCGCTACGCCGAAAACTTCAGCCGTGCTGCCTCCA GCTTGTTGGCCGTCGAGCGGGGGCCCCGAGAGGAGGTGTCATCCCATTTCCTGCACCATGGCAGCGCCCTGGCCCAGCCC GACTGCACCCCTTGGCTTCGCTACCAAGGCCGCACCGTGCAGCTGGTTTCCACACCTGTTGGCACAAGCCCAGATGTGAT TCAAGCCCTCAGGGACTCAGCCCCTGTTCAGGACCTGATCGAAGACATCGAGCGCGACACCAAGAAAGGTCGCAAGCTGA TCATCTCCGCCAGCCGGGTGGACTACACCAAAGGCAATGAAGAGCTGCTGCTGGCCTACGAGCGCCTGCTCGAACGTCGC CCAGAAATGCATGGCGACGTGGTGCTGATGCTGGCCTGCGTAGCAGCCAACACCGGCATGAAGGTCTACGAAGACACCCA ACGCAGCATTGAAGAGACCGTGGGCCGGATCAACGGTCGCTTCGGCCGCATCGATTGGGTGCCCATTCGACTGACCACGC AGCGGATCCCCTACGAGGAAATCGTGGCCTGGTTTGCCGCCTCCGACATCTGCTGGATCACGCCACTACGGGACGGGCTG AATCTTGTTGCCAAGGAATATGTGGCGGCCCGCAAGGGCCAAGGGGGCAGTTTGGTGCTGTCGGAGTTCACCGGTGCCTC GGTGGTTGTCGATGGCGCGATCCTCACCAACCCCTACTCCCATCGGCGCATGGACGAGGCGATCGACGCCGCGCTGATGA TGCCGATGGCCGAGCAGCGCGAGCGCATGCAGCGCATGGAGCGTGCCGTTGACACCTTGAGCGTGGCCAACTGGGCCAGT GAGCAGCTCAACGCGCTCGAGCACTAA
Upstream 100 bases:
>100_bases CGCGGGTCGATGGTGTACGAGTCGAGGTCTGGTTCATTCCTCAGCGCTCTGCGTTGGGGGCGCGAAGTTCCTCTATATCT GCCGTTTACAACCTGACTGC
Downstream 100 bases:
>100_bases GGCCCATGACGCTGCGCCGCCGGTTGCTGGGAGTGGTGCTAGCCAGCATCACCCTGCTGCTGATGGCAACAGGTGTGCCA GCAGCCACGATCCCGGTCTC
Product: glycosyltransferase of family GT20; trehalose-phosphate synthase
Products: NA
Alternate protein names: Glucosyl-glycerol-phosphate synthase; GG-phosphate synthase; GGPS [H]
Number of amino acids: Translated: 488; Mature: 487
Protein sequence:
>488_residues MPSSFVLVYHRSPFDEVIDADGNRSWQDQKSPNGIIPTLRNLFRDHPSGTWIAWRQDENNNGEDETTVIEEPLTIRLRRI PLQQQQISSFYHVTSKESAWPILHTFPSHFNVNNADWATFQEVNRRFAEAACNEAAPGACIWVHDYNLWLTPGYIRQQRP DVKVGFFHHTPFPSADVFGILPWREEIISSLLACDVVGFHIPRYAENFSRAASSLLAVERGPREEVSSHFLHHGSALAQP DCTPWLRYQGRTVQLVSTPVGTSPDVIQALRDSAPVQDLIEDIERDTKKGRKLIISASRVDYTKGNEELLLAYERLLERR PEMHGDVVLMLACVAANTGMKVYEDTQRSIEETVGRINGRFGRIDWVPIRLTTQRIPYEEIVAWFAASDICWITPLRDGL NLVAKEYVAARKGQGGSLVLSEFTGASVVVDGAILTNPYSHRRMDEAIDAALMMPMAEQRERMQRMERAVDTLSVANWAS EQLNALEH
Sequences:
>Translated_488_residues MPSSFVLVYHRSPFDEVIDADGNRSWQDQKSPNGIIPTLRNLFRDHPSGTWIAWRQDENNNGEDETTVIEEPLTIRLRRI PLQQQQISSFYHVTSKESAWPILHTFPSHFNVNNADWATFQEVNRRFAEAACNEAAPGACIWVHDYNLWLTPGYIRQQRP DVKVGFFHHTPFPSADVFGILPWREEIISSLLACDVVGFHIPRYAENFSRAASSLLAVERGPREEVSSHFLHHGSALAQP DCTPWLRYQGRTVQLVSTPVGTSPDVIQALRDSAPVQDLIEDIERDTKKGRKLIISASRVDYTKGNEELLLAYERLLERR PEMHGDVVLMLACVAANTGMKVYEDTQRSIEETVGRINGRFGRIDWVPIRLTTQRIPYEEIVAWFAASDICWITPLRDGL NLVAKEYVAARKGQGGSLVLSEFTGASVVVDGAILTNPYSHRRMDEAIDAALMMPMAEQRERMQRMERAVDTLSVANWAS EQLNALEH >Mature_487_residues PSSFVLVYHRSPFDEVIDADGNRSWQDQKSPNGIIPTLRNLFRDHPSGTWIAWRQDENNNGEDETTVIEEPLTIRLRRIP LQQQQISSFYHVTSKESAWPILHTFPSHFNVNNADWATFQEVNRRFAEAACNEAAPGACIWVHDYNLWLTPGYIRQQRPD VKVGFFHHTPFPSADVFGILPWREEIISSLLACDVVGFHIPRYAENFSRAASSLLAVERGPREEVSSHFLHHGSALAQPD CTPWLRYQGRTVQLVSTPVGTSPDVIQALRDSAPVQDLIEDIERDTKKGRKLIISASRVDYTKGNEELLLAYERLLERRP EMHGDVVLMLACVAANTGMKVYEDTQRSIEETVGRINGRFGRIDWVPIRLTTQRIPYEEIVAWFAASDICWITPLRDGLN LVAKEYVAARKGQGGSLVLSEFTGASVVVDGAILTNPYSHRRMDEAIDAALMMPMAEQRERMQRMERAVDTLSVANWASE QLNALEH
Specific function: Involved in salt tolerance by producing GG-phosphate from ADP-glucose and glycerol-3-phosphate (G3P), an intermediate in the synthesis of the osmolyte glucosylglycerol (GG) [H]
COG id: COG0380
COG function: function code G; Trehalose-6-phosphate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 20 family [H]
Homologues:
Organism=Escherichia coli, GI1788206, Length=432, Percent_Identity=29.1666666666667, Blast_Score=197, Evalue=2e-51, Organism=Caenorhabditis elegans, GI71987012, Length=438, Percent_Identity=26.2557077625571, Blast_Score=124, Evalue=2e-28, Organism=Caenorhabditis elegans, GI115533560, Length=376, Percent_Identity=26.3297872340426, Blast_Score=122, Evalue=5e-28, Organism=Caenorhabditis elegans, GI115533558, Length=376, Percent_Identity=26.3297872340426, Blast_Score=122, Evalue=6e-28, Organism=Saccharomyces cerevisiae, GI6319602, Length=463, Percent_Identity=32.1814254859611, Blast_Score=268, Evalue=2e-72, Organism=Saccharomyces cerevisiae, GI6323537, Length=402, Percent_Identity=30.3482587064677, Blast_Score=190, Evalue=4e-49, Organism=Saccharomyces cerevisiae, GI6323917, Length=400, Percent_Identity=28.5, Blast_Score=173, Evalue=6e-44, Organism=Saccharomyces cerevisiae, GI6320279, Length=406, Percent_Identity=26.3546798029557, Blast_Score=147, Evalue=3e-36, Organism=Drosophila melanogaster, GI19920676, Length=508, Percent_Identity=30.3149606299213, Blast_Score=232, Evalue=4e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012764 - InterPro: IPR001830 [H]
Pfam domain/function: PF00982 Glyco_transf_20 [H]
EC number: =2.4.1.213 [H]
Molecular weight: Translated: 55373; Mature: 55242
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSFVLVYHRSPFDEVIDADGNRSWQDQKSPNGIIPTLRNLFRDHPSGTWIAWRQDENN CCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCC NGEDETTVIEEPLTIRLRRIPLQQQQISSFYHVTSKESAWPILHTFPSHFNVNNADWATF CCCCCCEEECCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCHHHH QEVNRRFAEAACNEAAPGACIWVHDYNLWLTPGYIRQQRPDVKVGFFHHTPFPSADVFGI HHHHHHHHHHHHCCCCCCEEEEEEECEEEECCCHHHCCCCCCEEEEEECCCCCCCCEEEE LPWREEIISSLLACDVVGFHIPRYAENFSRAASSLLAVERGPREEVSSHFLHHGSALAQP CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC DCTPWLRYQGRTVQLVSTPVGTSPDVIQALRDSAPVQDLIEDIERDTKKGRKLIISASRV CCCHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCC DYTKGNEELLLAYERLLERRPEMHGDVVLMLACVAANTGMKVYEDTQRSIEETVGRINGR CCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC FGRIDWVPIRLTTQRIPYEEIVAWFAASDICWITPLRDGLNLVAKEYVAARKGQGGSLVL CCCEEEEEEEEECCCCCHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHCCCCCCEEE SEFTGASVVVDGAILTNPYSHRRMDEAIDAALMMPMAEQRERMQRMERAVDTLSVANWAS ECCCCCEEEECCHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH EQLNALEH HHHHHHCC >Mature Secondary Structure PSSFVLVYHRSPFDEVIDADGNRSWQDQKSPNGIIPTLRNLFRDHPSGTWIAWRQDENN CCCEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCC NGEDETTVIEEPLTIRLRRIPLQQQQISSFYHVTSKESAWPILHTFPSHFNVNNADWATF CCCCCCEEECCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCHHHH QEVNRRFAEAACNEAAPGACIWVHDYNLWLTPGYIRQQRPDVKVGFFHHTPFPSADVFGI HHHHHHHHHHHHCCCCCCEEEEEEECEEEECCCHHHCCCCCCEEEEEECCCCCCCCEEEE LPWREEIISSLLACDVVGFHIPRYAENFSRAASSLLAVERGPREEVSSHFLHHGSALAQP CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC DCTPWLRYQGRTVQLVSTPVGTSPDVIQALRDSAPVQDLIEDIERDTKKGRKLIISASRV CCCHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCC DYTKGNEELLLAYERLLERRPEMHGDVVLMLACVAANTGMKVYEDTQRSIEETVGRINGR CCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC FGRIDWVPIRLTTQRIPYEEIVAWFAASDICWITPLRDGLNLVAKEYVAARKGQGGSLVL CCCEEEEEEEEECCCCCHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHCCCCCCEEE SEFTGASVVVDGAILTNPYSHRRMDEAIDAALMMPMAEQRERMQRMERAVDTLSVANWAS ECCCCCEEEECCHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH EQLNALEH HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231; 9733686 [H]