| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
Click here to switch to the map view.
The map label for this gene is yqaB [C]
Identifier: 148242445
GI number: 148242445
Start: 1192208
End: 1192873
Strand: Direct
Name: yqaB [C]
Synonym: SynRCC307_1346
Alternate gene names: 148242445
Gene position: 1192208-1192873 (Clockwise)
Preceding gene: 148242442
Following gene: 148242447
Centisome position: 53.58
GC content: 63.51
Gene sequence:
>666_bases ATGGAGGCATTCAGTGGCAAAGCCATGCCGGCGGGCTGCCTGTTCGATCTCGATGGGTTGCTACTCGATACCGAGCCGCT GCATGGACAAGCCTGGGCGGAAGCCGTGGGCCAATTTGGCGGCTCTGCCAGCGCCGAGCTGCTGCTGGGTTTGAGGGGGC GCAACAAGTTCGACAACGCCTCAGGCCTGATTGAGGCACTGCAGTTGACGGTCTCGGTGGAGCAGCTGCTGGCGGTGCAA CAACCCTTGGCACGCGCCAAGGTGCGTCAAGCCAGGGCCATGCCGGGCGCCGAACGGTTGGTTCAGCACTTGCAGGCCGC TGGGATGCCGCTGGCCATCGCCACCAGCAGCGGTCGGGAATCAGTGGAGATCAAGCTGGCCCCACACCCGTGGCTACAAA GCATTGCCGTGCGGGTGCATGGGGATGATCCCCAGATCCAACAGGGCAAACCAGCACCAGATCTGTTCATCGAGGCGGCC CGCCGCCTCAATGTGGACCCCACGCTGTGCTGGGCCTTTGAGGATTCACAAGCGGGTGCGATAGCCGCACTTGCCGCTGG CTGCCGGGTGTTTGTGGTTCCCGCTGAAGGGCTCAACCGAAGCGACTACCCCTCAGCGGTGGACTGGCTGGGCAGCTTGA ACAAGACCCCGCTCGATCAGCTTTAG
Upstream 100 bases:
>100_bases CAGATTCGATCTGAGGGTCCGCCATCAACGGGGCCGTGCATACCAAAGGAATTAAACCCACTCCACTGCCCAGACGGGAC ACGGCTGACACGGTTGTTCA
Downstream 100 bases:
>100_bases GTCGATCAAACCTGGCGGAACTGCAGGCTCAAAGGGTCGGCCCAATCACCGCTGGCTTGAATGCCGCGTGGATTACCACT GAGGTGGCGCAGGATGAAGA
Product: phosphatase/phosphohexomutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MEAFSGKAMPAGCLFDLDGLLLDTEPLHGQAWAEAVGQFGGSASAELLLGLRGRNKFDNASGLIEALQLTVSVEQLLAVQ QPLARAKVRQARAMPGAERLVQHLQAAGMPLAIATSSGRESVEIKLAPHPWLQSIAVRVHGDDPQIQQGKPAPDLFIEAA RRLNVDPTLCWAFEDSQAGAIAALAAGCRVFVVPAEGLNRSDYPSAVDWLGSLNKTPLDQL
Sequences:
>Translated_221_residues MEAFSGKAMPAGCLFDLDGLLLDTEPLHGQAWAEAVGQFGGSASAELLLGLRGRNKFDNASGLIEALQLTVSVEQLLAVQ QPLARAKVRQARAMPGAERLVQHLQAAGMPLAIATSSGRESVEIKLAPHPWLQSIAVRVHGDDPQIQQGKPAPDLFIEAA RRLNVDPTLCWAFEDSQAGAIAALAAGCRVFVVPAEGLNRSDYPSAVDWLGSLNKTPLDQL >Mature_221_residues MEAFSGKAMPAGCLFDLDGLLLDTEPLHGQAWAEAVGQFGGSASAELLLGLRGRNKFDNASGLIEALQLTVSVEQLLAVQ QPLARAKVRQARAMPGAERLVQHLQAAGMPLAIATSSGRESVEIKLAPHPWLQSIAVRVHGDDPQIQQGKPAPDLFIEAA RRLNVDPTLCWAFEDSQAGAIAALAAGCRVFVVPAEGLNRSDYPSAVDWLGSLNKTPLDQL
Specific function: Unknown
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Homo sapiens, GI197382691, Length=204, Percent_Identity=38.7254901960784, Blast_Score=135, Evalue=2e-32, Organism=Homo sapiens, GI207113149, Length=227, Percent_Identity=34.8017621145374, Blast_Score=122, Evalue=3e-28, Organism=Homo sapiens, GI296011028, Length=181, Percent_Identity=37.0165745856354, Blast_Score=111, Evalue=5e-25, Organism=Homo sapiens, GI296011030, Length=203, Percent_Identity=33.9901477832512, Blast_Score=100, Evalue=2e-21, Organism=Escherichia coli, GI1789046, Length=183, Percent_Identity=34.9726775956284, Blast_Score=83, Evalue=1e-17, Organism=Escherichia coli, GI87082080, Length=184, Percent_Identity=31.5217391304348, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1788021, Length=189, Percent_Identity=32.2751322751323, Blast_Score=65, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17554716, Length=204, Percent_Identity=33.3333333333333, Blast_Score=104, Evalue=3e-23, Organism=Drosophila melanogaster, GI17137324, Length=205, Percent_Identity=39.0243902439024, Blast_Score=122, Evalue=1e-28, Organism=Drosophila melanogaster, GI45550911, Length=186, Percent_Identity=35.4838709677419, Blast_Score=119, Evalue=2e-27, Organism=Drosophila melanogaster, GI116008157, Length=205, Percent_Identity=36.0975609756098, Blast_Score=116, Evalue=1e-26, Organism=Drosophila melanogaster, GI24580849, Length=174, Percent_Identity=33.3333333333333, Blast_Score=98, Evalue=4e-21, Organism=Drosophila melanogaster, GI20129151, Length=208, Percent_Identity=26.9230769230769, Blast_Score=83, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010976 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 23478; Mature: 23478
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAFSGKAMPAGCLFDLDGLLLDTEPLHGQAWAEAVGQFGGSASAELLLGLRGRNKFDNA CCCCCCCCCCCCCEEECCCEEECCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCH SGLIEALQLTVSVEQLLAVQQPLARAKVRQARAMPGAERLVQHLQAAGMPLAIATSSGRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCC SVEIKLAPHPWLQSIAVRVHGDDPQIQQGKPAPDLFIEAARRLNVDPTLCWAFEDSQAGA EEEEEECCCHHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCH IAALAAGCRVFVVPAEGLNRSDYPSAVDWLGSLNKTPLDQL HHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCC >Mature Secondary Structure MEAFSGKAMPAGCLFDLDGLLLDTEPLHGQAWAEAVGQFGGSASAELLLGLRGRNKFDNA CCCCCCCCCCCCCEEECCCEEECCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCH SGLIEALQLTVSVEQLLAVQQPLARAKVRQARAMPGAERLVQHLQAAGMPLAIATSSGRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCC SVEIKLAPHPWLQSIAVRVHGDDPQIQQGKPAPDLFIEAARRLNVDPTLCWAFEDSQAGA EEEEEECCCHHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCH IAALAAGCRVFVVPAEGLNRSDYPSAVDWLGSLNKTPLDQL HHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]