Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148242447

Identifier: 148242447

GI number: 148242447

Start: 1194665

End: 1195450

Strand: Direct

Name: 148242447

Synonym: SynRCC307_1348

Alternate gene names: NA

Gene position: 1194665-1195450 (Clockwise)

Preceding gene: 148242445

Following gene: 148242451

Centisome position: 53.69

GC content: 63.36

Gene sequence:

>786_bases
GTGCCGCTGAGCCGCTTCCCCACTGCCATTACCGCCAGTCTGTTGGGTCTAGCCGCCCTGCTTCCGGCCACCCAACCCTG
GGAGGGTTGGAGTTTGCCGGCTGAGCCTGAGCTTCAACAACTCATGGCGGAGGGCGGGCAACCCAACCCAGCCGATTTCA
GCCCTGAAGAGCTGCAAGAGCTGCAGCGCCGCTTTGGGGTGCATGGTCCGCAGCCGGCCTTGGCTCAGCTCCTAACAGCA
GGCCTGGATCAATGGCAGCCGCTGCGGCGCAACACCCTCGAGCAGATCCAAAGCCTCGTTCCCACCATCCGCCGTGAGGC
CAGGGCTCGCACCCTCAACCCGATGCTGCTGGGGGCCATCCTTTACGACGAAATTCAACATGCCAAGCCGGGCGAAAATT
CCCCTTGGCTTGTGCATTCCGGCTTGCTGCAAACCCACGGGCCCGCTCAGCTCGGTGTTGAAGAGCTGATCCATCAAGGC
TTGCTGCCCGCCGATCCCAGCCCCGAGCAGCGTCAACAGGCCCGCGAACAACTGCTCGATCCCCAGCGCAATGTGGCCCT
CCTCGCTGGAAAGATGGCTCGGCTCTCCAGCGCCTTGGGCATCCCCAGCGGACACCTCTTGGAGGCCAGCAACGGCTACC
GCGATGCCCACTGGATCGCCACCTTGGCCTACCTGCACAACGGCAAACTCGATTATCCGGCCCGGATCTTGGGGTACATG
CAAGATCCAGCCCTGCACGCCTTGATCTACGGGCGCACCCTTCGGCTCACCAACCCGATCATCTAG

Upstream 100 bases:

>100_bases
GAAGACAGTGATCACCAAAAGCCAAGAACATTCTTGGATTGTGTAGTGATTTTGACTGGCCTTCATAAATTCAGTTTGTC
AGAGATATCTGCGAGCACCA

Downstream 100 bases:

>100_bases
CGGCTCAGCAAACCAGACCTAAGGCCGTAAGCCTGGTTTGCAGCTGCTGCCAATCAAAACTGCGTGGGTCGCTGCGGGCA
TTACCCAGATCCACATGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MPLSRFPTAITASLLGLAALLPATQPWEGWSLPAEPELQQLMAEGGQPNPADFSPEELQELQRRFGVHGPQPALAQLLTA
GLDQWQPLRRNTLEQIQSLVPTIRREARARTLNPMLLGAILYDEIQHAKPGENSPWLVHSGLLQTHGPAQLGVEELIHQG
LLPADPSPEQRQQAREQLLDPQRNVALLAGKMARLSSALGIPSGHLLEASNGYRDAHWIATLAYLHNGKLDYPARILGYM
QDPALHALIYGRTLRLTNPII

Sequences:

>Translated_261_residues
MPLSRFPTAITASLLGLAALLPATQPWEGWSLPAEPELQQLMAEGGQPNPADFSPEELQELQRRFGVHGPQPALAQLLTA
GLDQWQPLRRNTLEQIQSLVPTIRREARARTLNPMLLGAILYDEIQHAKPGENSPWLVHSGLLQTHGPAQLGVEELIHQG
LLPADPSPEQRQQAREQLLDPQRNVALLAGKMARLSSALGIPSGHLLEASNGYRDAHWIATLAYLHNGKLDYPARILGYM
QDPALHALIYGRTLRLTNPII
>Mature_260_residues
PLSRFPTAITASLLGLAALLPATQPWEGWSLPAEPELQQLMAEGGQPNPADFSPEELQELQRRFGVHGPQPALAQLLTAG
LDQWQPLRRNTLEQIQSLVPTIRREARARTLNPMLLGAILYDEIQHAKPGENSPWLVHSGLLQTHGPAQLGVEELIHQGL
LPADPSPEQRQQAREQLLDPQRNVALLAGKMARLSSALGIPSGHLLEASNGYRDAHWIATLAYLHNGKLDYPARILGYMQ
DPALHALIYGRTLRLTNPII

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28751; Mature: 28620

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLSRFPTAITASLLGLAALLPATQPWEGWSLPAEPELQQLMAEGGQPNPADFSPEELQE
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHH
LQRRFGVHGPQPALAQLLTAGLDQWQPLRRNTLEQIQSLVPTIRREARARTLNPMLLGAI
HHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LYDEIQHAKPGENSPWLVHSGLLQTHGPAQLGVEELIHQGLLPADPSPEQRQQAREQLLD
HHHHHHHCCCCCCCCEEEECCCHHCCCCHHHCHHHHHHCCCCCCCCCHHHHHHHHHHHHC
PQRNVALLAGKMARLSSALGIPSGHLLEASNGYRDAHWIATLAYLHNGKLDYPARILGYM
CCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH
QDPALHALIYGRTLRLTNPII
CCHHHHHHHHCCHHHHCCCCC
>Mature Secondary Structure 
PLSRFPTAITASLLGLAALLPATQPWEGWSLPAEPELQQLMAEGGQPNPADFSPEELQE
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHH
LQRRFGVHGPQPALAQLLTAGLDQWQPLRRNTLEQIQSLVPTIRREARARTLNPMLLGAI
HHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LYDEIQHAKPGENSPWLVHSGLLQTHGPAQLGVEELIHQGLLPADPSPEQRQQAREQLLD
HHHHHHHCCCCCCCCEEEECCCHHCCCCHHHCHHHHHHCCCCCCCCCHHHHHHHHHHHHC
PQRNVALLAGKMARLSSALGIPSGHLLEASNGYRDAHWIATLAYLHNGKLDYPARILGYM
CCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH
QDPALHALIYGRTLRLTNPII
CCHHHHHHHHCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA