| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is bcp [H]
Identifier: 148242441
GI number: 148242441
Start: 1187911
End: 1188366
Strand: Direct
Name: bcp [H]
Synonym: SynRCC307_1342
Alternate gene names: 148242441
Gene position: 1187911-1188366 (Clockwise)
Preceding gene: 148242438
Following gene: 148242442
Centisome position: 53.39
GC content: 58.99
Gene sequence:
>456_bases ATGCCCATCGCTGTTGGCGATCAAGCTCCTCCGTTCAAAGCCAAAGATCAAAACGGAGTGGAGCGCTGCCTCGCCGACTT GGGCGGCAAACCTCTGGTGCTGTTTTTCTATCCAAAGGACGACACGCCCGGCTGCACCATCGAGGCCTGCGGTTTCCGGG ATCAATTCGCCGCCCTGCAAGCGCTTGGCGCTGAAGTTTGGGGCGTCAGTGGTGATGGGGCCGGCAGTCACCGCCGCTTT GTGAGCAAGTTCCAGCTTCCTTACCCGTTGCTAGTGGATGAGGGCAATGCGCTGCGCGACGCCTTTGGCGTTGCCAAAAC CCTGTTTGTCATCCCAGGTCGCGTCACGTATGTGATCGATGGCGGCGGTGTAGTGCGTCTGGTGTTTGACGAGATGCTTG ATGCCAACGCCCATGTGCGCCAAGCCATGGCAACCCTGCAACAACTCAAGGGCTAA
Upstream 100 bases:
>100_bases CAGACATTGCGTACGCCCGGCTGCAGCCCATGGTCCCAGCCACCCATCCGTTGCGCCAGCGAGATGTTTATGGTCGTGCA GCGGCTTAAGGATCGATTCG
Downstream 100 bases:
>100_bases TGCCGACCTGGCGCCAGCGCGGTGAGCTGTGGACCGTGGGTCCAACCCAACCGAAGGGGGTGGTGCAGTTTCTTGGCGGC AGTGGCTTAGGCGCGAGCCC
Product: peroxiredoxin
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MPIAVGDQAPPFKAKDQNGVERCLADLGGKPLVLFFYPKDDTPGCTIEACGFRDQFAALQALGAEVWGVSGDGAGSHRRF VSKFQLPYPLLVDEGNALRDAFGVAKTLFVIPGRVTYVIDGGGVVRLVFDEMLDANAHVRQAMATLQQLKG
Sequences:
>Translated_151_residues MPIAVGDQAPPFKAKDQNGVERCLADLGGKPLVLFFYPKDDTPGCTIEACGFRDQFAALQALGAEVWGVSGDGAGSHRRF VSKFQLPYPLLVDEGNALRDAFGVAKTLFVIPGRVTYVIDGGGVVRLVFDEMLDANAHVRQAMATLQQLKG >Mature_150_residues PIAVGDQAPPFKAKDQNGVERCLADLGGKPLVLFFYPKDDTPGCTIEACGFRDQFAALQALGAEVWGVSGDGAGSHRRFV SKFQLPYPLLVDEGNALRDAFGVAKTLFVIPGRVTYVIDGGGVVRLVFDEMLDANAHVRQAMATLQQLKG
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI32189392, Length=156, Percent_Identity=34.6153846153846, Blast_Score=70, Evalue=6e-13, Organism=Escherichia coli, GI1788825, Length=144, Percent_Identity=38.1944444444444, Blast_Score=100, Evalue=4e-23, Organism=Saccharomyces cerevisiae, GI6322180, Length=107, Percent_Identity=35.5140186915888, Blast_Score=72, Evalue=5e-14,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 16197; Mature: 16066
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIAVGDQAPPFKAKDQNGVERCLADLGGKPLVLFFYPKDDTPGCTIEACGFRDQFAALQ CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEECCCHHHHHHHH ALGAEVWGVSGDGAGSHRRFVSKFQLPYPLLVDEGNALRDAFGVAKTLFVIPGRVTYVID HHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHEEEECCEEEEEEC GGGVVRLVFDEMLDANAHVRQAMATLQQLKG CCCEEEEEHHHHHCCCHHHHHHHHHHHHHCC >Mature Secondary Structure PIAVGDQAPPFKAKDQNGVERCLADLGGKPLVLFFYPKDDTPGCTIEACGFRDQFAALQ CCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEECCCHHHHHHHH ALGAEVWGVSGDGAGSHRRFVSKFQLPYPLLVDEGNALRDAFGVAKTLFVIPGRVTYVID HHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHEEEECCEEEEEEC GGGVVRLVFDEMLDANAHVRQAMATLQQLKG CCCEEEEEHHHHHCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12704232 [H]