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The map label for this gene is petF [H]

Identifier: 148242438

GI number: 148242438

Start: 1186462

End: 1186746

Strand: Direct

Name: petF [H]

Synonym: SynRCC307_1339

Alternate gene names: 148242438

Gene position: 1186462-1186746 (Clockwise)

Preceding gene: 148242437

Following gene: 148242441

Centisome position: 53.33

GC content: 57.19

Gene sequence:

>285_bases
ATGGGCTCCTACACGATCTCCGTCGAGGGTGGAGGCAGCTTCAGCTGCACCGATGACACCTACATCCTTGATGCTGCTGA
AGAAGCAGGAGTCGACCTTCCCTATTCCTGCCGAGCGGGGGCTTGCTCCACCTGTGCCGGAAAATTGGTGAGCGGCTCGG
TGGATCAAGCCGATCAGAGTTTTCTAGATGACGATCAAATGGGCCAGGGCTATGCCCTGCTCTGCGTGAGCTATCCCACC
AGCGATTGCACCATCAAGACGAACGTCGAGCAGGAACTGAGCTGA

Upstream 100 bases:

>100_bases
CGCCGCTCCGATCCATCGTTAACCCTCAACCGGCTACGGCCGGTTTTTTTATGCCCACTGGTGATCGCATTGCTACCAAC
AAAGGAGGCATTGCTTTTCC

Downstream 100 bases:

>100_bases
CGCTCAGTGCAGCCGCGTGGCAGCGCCATAACCCTTAAGCCAGCGGTTCACGCGAGGCTTAAGGCTGGCGGGCACTTCAT
GCAGCAACTGATCCAATTCC

Product: ferredoxin

Products: NA

Alternate protein names: Ferredoxin I [H]

Number of amino acids: Translated: 94; Mature: 93

Protein sequence:

>94_residues
MGSYTISVEGGGSFSCTDDTYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQADQSFLDDDQMGQGYALLCVSYPT
SDCTIKTNVEQELS

Sequences:

>Translated_94_residues
MGSYTISVEGGGSFSCTDDTYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQADQSFLDDDQMGQGYALLCVSYPT
SDCTIKTNVEQELS
>Mature_93_residues
GSYTISVEGGGSFSCTDDTYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQADQSFLDDDQMGQGYALLCVSYPTS
DCTIKTNVEQELS

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1787658, Length=69, Percent_Identity=43.4782608695652, Blast_Score=60, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR010241
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 9786; Mature: 9654

Theoretical pI: Translated: 3.46; Mature: 3.46

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
6.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSYTISVEGGGSFSCTDDTYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQADQS
CCCEEEEECCCCCEEECCCCEEEECHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHH
FLDDDQMGQGYALLCVSYPTSDCTIKTNVEQELS
HCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCC
>Mature Secondary Structure 
GSYTISVEGGGSFSCTDDTYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQADQS
CCEEEEECCCCCEEECCCCEEEECHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHH
FLDDDQMGQGYALLCVSYPTSDCTIKTNVEQELS
HCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: FAD [C]

Metal ions: Iron-Sulfur [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9305771; 8590279; 8905231; 1633177; 7578051 [H]