| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
Click here to switch to the map view.
The map label for this gene is ilvE [H]
Identifier: 148242307
GI number: 148242307
Start: 1067088
End: 1068002
Strand: Direct
Name: ilvE [H]
Synonym: SynRCC307_1208
Alternate gene names: 148242307
Gene position: 1067088-1068002 (Clockwise)
Preceding gene: 148242305
Following gene: 148242308
Centisome position: 47.96
GC content: 62.4
Gene sequence:
>915_bases ATGCATCGCTTCCTGCCCTACGCCTGGTTCGGCGGACGCTGCGTGCCATTTGCTGAAGCCACGCTGTCGGTGGCGACCCA TGCCTTGCACTACGGCACCGGTGCCTTTGGCGGCATGCGGGCCCTGCCAAATCCTCAAGATCCCGGCGAGATCCTGCTGT TCCGGGCTGATCGCCATGCCAAGCGCCTGAGCCAGAGCGCACGCTTGCTGCTCACTGATTTGCCCGCGTCCACTGTTTTG GAGGCGGTGGAGGCTTTCCTGAAGGCCAACCAGCCCAGCTGTCCGATCTACCTGCGCCCATTCGTTTACACCTCCGATCT CGGTATCGCCCCGCGGCTGCACGACATCGAGACCGATTTTCTGATCTATGGCCTGGAACTGGGGGACTACCTCTCTCCGG AGGGCGTCAGCTGCCGGATCAGCTCCTGGACACGCCAGGAGGACCGCTCTCTCCCCCTGAGGGGCAAGATCAGTGGGGCC TACATCACCAGCTCCCTGGCCAAGACAGAGGCAGTGAAGAGCGGATTTGATGAGGCGCTGCTTCTGAACAGCCGCGGCAA GGTGAGCGAAGCCAGCGGCATGAACCTGTTCATCGTTCGCGATGGGGTGCTCTACACCCCTGGCGTCGACCAGGACATCC TGGAGGGAATCACCCGTGGCAGCGTGATCGAGCTGGCTCGCCACATGGGCTACACCGTGGTGGAACGGCCGATCGACAAG AGCGAATTATTTGTTGCCGAGGAGGTTTTCCTGACCGGCACCGCCGCCAAGGTCACCCCGGTGCGGCGCGTGGAATGCAC CGACCTGTCCTCTGATCGGCCGGTCATGGATGCCTTGCGCGAGCGCATCACCGCCATTACCGAGGGGCGAGACCCTAACT TTGAGCACTGGGTGACGCGGATTCGGATTAAGTGA
Upstream 100 bases:
>100_bases CCCCTCGCCGGGATCCCCTGGCAGTGCTGCCAATCTGTGCATGGCTTGATTCTCGCTCAGCAGAGGAGGTGAGAAGATCT GCCCAGGTCTGTGTCGCTCC
Downstream 100 bases:
>100_bases TGCACCGCTTTCTGGAGAGACTGCACGCTCCGGAGCGGCCAGTTCTCGTCTTCGATGGGGCGACGGGTACCTCGCTCCAA CAGATGGATCTTGGCCCCGA
Product: branched-chain amino acid aminotransferase
Products: NA
Alternate protein names: BCAT [H]
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MHRFLPYAWFGGRCVPFAEATLSVATHALHYGTGAFGGMRALPNPQDPGEILLFRADRHAKRLSQSARLLLTDLPASTVL EAVEAFLKANQPSCPIYLRPFVYTSDLGIAPRLHDIETDFLIYGLELGDYLSPEGVSCRISSWTRQEDRSLPLRGKISGA YITSSLAKTEAVKSGFDEALLLNSRGKVSEASGMNLFIVRDGVLYTPGVDQDILEGITRGSVIELARHMGYTVVERPIDK SELFVAEEVFLTGTAAKVTPVRRVECTDLSSDRPVMDALRERITAITEGRDPNFEHWVTRIRIK
Sequences:
>Translated_304_residues MHRFLPYAWFGGRCVPFAEATLSVATHALHYGTGAFGGMRALPNPQDPGEILLFRADRHAKRLSQSARLLLTDLPASTVL EAVEAFLKANQPSCPIYLRPFVYTSDLGIAPRLHDIETDFLIYGLELGDYLSPEGVSCRISSWTRQEDRSLPLRGKISGA YITSSLAKTEAVKSGFDEALLLNSRGKVSEASGMNLFIVRDGVLYTPGVDQDILEGITRGSVIELARHMGYTVVERPIDK SELFVAEEVFLTGTAAKVTPVRRVECTDLSSDRPVMDALRERITAITEGRDPNFEHWVTRIRIK >Mature_304_residues MHRFLPYAWFGGRCVPFAEATLSVATHALHYGTGAFGGMRALPNPQDPGEILLFRADRHAKRLSQSARLLLTDLPASTVL EAVEAFLKANQPSCPIYLRPFVYTSDLGIAPRLHDIETDFLIYGLELGDYLSPEGVSCRISSWTRQEDRSLPLRGKISGA YITSSLAKTEAVKSGFDEALLLNSRGKVSEASGMNLFIVRDGVLYTPGVDQDILEGITRGSVIELARHMGYTVVERPIDK SELFVAEEVFLTGTAAKVTPVRRVECTDLSSDRPVMDALRERITAITEGRDPNFEHWVTRIRIK
Specific function: Acts on leucine, isoleucine and valine [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI296010906, Length=319, Percent_Identity=27.8996865203762, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI38176287, Length=319, Percent_Identity=27.8996865203762, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI296010904, Length=319, Percent_Identity=27.8996865203762, Blast_Score=78, Evalue=1e-14, Organism=Escherichia coli, GI48994963, Length=305, Percent_Identity=33.1147540983607, Blast_Score=180, Evalue=1e-46, Organism=Saccharomyces cerevisiae, GI6322002, Length=327, Percent_Identity=23.8532110091743, Blast_Score=70, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6322608, Length=284, Percent_Identity=23.943661971831, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005785 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 33683; Mature: 33683
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: PS00037 MYB_1 ; PS00770 AA_TRANSFER_CLASS_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRFLPYAWFGGRCVPFAEATLSVATHALHYGTGAFGGMRALPNPQDPGEILLFRADRHA CCCCCCEEEECCEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCHHH KRLSQSARLLLTDLPASTVLEAVEAFLKANQPSCPIYLRPFVYTSDLGIAPRLHDIETDF HHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCCCCEEEECEEEECCCCCCCCCCCCCCCE LIYGLELGDYLSPEGVSCRISSWTRQEDRSLPLRGKISGAYITSSLAKTEAVKSGFDEAL EEEEEECCCCCCCCCCEEEECCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEE LLNSRGKVSEASGMNLFIVRDGVLYTPGVDQDILEGITRGSVIELARHMGYTVVERPIDK EECCCCCCCCCCCCEEEEEECCEEECCCCCHHHHHHCCCCHHHHHHHHCCCEEECCCCCH SELFVAEEVFLTGTAAKVTPVRRVECTDLSSDRPVMDALRERITAITEGRDPNFEHWVTR HHEEEEEHHEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHEEEE IRIK EECC >Mature Secondary Structure MHRFLPYAWFGGRCVPFAEATLSVATHALHYGTGAFGGMRALPNPQDPGEILLFRADRHA CCCCCCEEEECCEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCHHH KRLSQSARLLLTDLPASTVLEAVEAFLKANQPSCPIYLRPFVYTSDLGIAPRLHDIETDF HHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCCCCEEEECEEEECCCCCCCCCCCCCCCE LIYGLELGDYLSPEGVSCRISSWTRQEDRSLPLRGKISGAYITSSLAKTEAVKSGFDEAL EEEEEECCCCCCCCCCEEEECCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEE LLNSRGKVSEASGMNLFIVRDGVLYTPGVDQDILEGITRGSVIELARHMGYTVVERPIDK EECCCCCCCCCCCCEEEEEECCEEECCCCCHHHHHHCCCCHHHHHHHHCCCEEECCCCCH SELFVAEEVFLTGTAAKVTPVRRVECTDLSSDRPVMDALRERITAITEGRDPNFEHWVTR HHEEEEEHHEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHEEEE IRIK EECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]