| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
Click here to switch to the map view.
The map label for this gene is murI [H]
Identifier: 148242257
GI number: 148242257
Start: 1024712
End: 1025590
Strand: Direct
Name: murI [H]
Synonym: SynRCC307_1158
Alternate gene names: 148242257
Gene position: 1024712-1025590 (Clockwise)
Preceding gene: 148242256
Following gene: 148242258
Centisome position: 46.06
GC content: 64.05
Gene sequence:
>879_bases ATGACCCTGAGCTCTTCTGCTGATGCCCTGAGCCTCTCGTTGCAGCGCGTGGCCACATCGGAGTTCACCGGGTTGCGGCC TCAGGCCCTGTTGGGATTGTTCGATAGCGGTTTGGGTGGCCTAACCGTGTTGCGCCGCTTGCTGAGCCAGCGGCCAGGCC AGCGGTGCGTGTACGTGGGGGATACGGCCCGCGTTCCCTACGGCAGCCGCGACCGCGCTGAAATCCGCTGCATTGCCGCT GAGGTGGTGGGCTGGCTGCGTGAGCAAGGAGCGGAAGCCGTGGTGATGGCCTGCAACACCACCAATGCTTTGGCCCTTGA TGTGGCCCAGTCCGAAGCCGGGGTGCCGGTGTTGGGTCTGATTGATGCGGTGGCCCGTCAGGTGCAGCAACAGCGCATTG GCGTCCTTGCCACGGAAGCCACAGCCTCCAGTGGCGCCTACGGCCGCGCATTGCAGGCTCAGCGCCAGGGTTTAACCATC GTTGAGATGGGTTGTCCCGCCTTTGTTCCAGCTGTCGAGGCCCATCAGCTCGACACACCGGCCTTGCGGCGAGCAGCGCA GCGCTATCTCGAACCCCTGCTGGATGCTCGCGTCGAAGCCATCGTTTTGGGCTGCAGCCACTACCCGCTGCTCGAGCCGA TGCTGCGCGATCTGCTGCCAGCGGGCGTTGAGCTGATTGATCCAGCCCATGCTCTGGTCGATCTCACCCTGTCGCTTTTT CCTGATCAACGGCGGCCCGCCATTGAGCCAGATCTCAGTGGCTGCCGGGTTGTGGCCACGGGCGATCCCGCTGAATTTGC TGCAGGATCGGCCCGTTGGTTGGGTCAACGGCCCCCGGTTGAGCAGATTTCTCTCCAGCCAGAGGGTCACGGCCACTAG
Upstream 100 bases:
>100_bases CCGGAACCGCCGATGCTGCCGATCTGGCTGACCCTGCCCACCGTCGTCAGCTGGCACTGGCGATCGCCGTGGGAATCCTC AACTATCTGAGAGTGGCCGG
Downstream 100 bases:
>100_bases GATCGGCTCACTCAGGCGGAGCCATGTCGACGGTTGCCCAGCTTCTTCAGCCCGTCGAGTCTGACCTCGAGCAGCTTCTC AGCGATTTGCGCGCCTTAAT
Product: glutamate racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MTLSSSADALSLSLQRVATSEFTGLRPQALLGLFDSGLGGLTVLRRLLSQRPGQRCVYVGDTARVPYGSRDRAEIRCIAA EVVGWLREQGAEAVVMACNTTNALALDVAQSEAGVPVLGLIDAVARQVQQQRIGVLATEATASSGAYGRALQAQRQGLTI VEMGCPAFVPAVEAHQLDTPALRRAAQRYLEPLLDARVEAIVLGCSHYPLLEPMLRDLLPAGVELIDPAHALVDLTLSLF PDQRRPAIEPDLSGCRVVATGDPAEFAAGSARWLGQRPPVEQISLQPEGHGH
Sequences:
>Translated_292_residues MTLSSSADALSLSLQRVATSEFTGLRPQALLGLFDSGLGGLTVLRRLLSQRPGQRCVYVGDTARVPYGSRDRAEIRCIAA EVVGWLREQGAEAVVMACNTTNALALDVAQSEAGVPVLGLIDAVARQVQQQRIGVLATEATASSGAYGRALQAQRQGLTI VEMGCPAFVPAVEAHQLDTPALRRAAQRYLEPLLDARVEAIVLGCSHYPLLEPMLRDLLPAGVELIDPAHALVDLTLSLF PDQRRPAIEPDLSGCRVVATGDPAEFAAGSARWLGQRPPVEQISLQPEGHGH >Mature_291_residues TLSSSADALSLSLQRVATSEFTGLRPQALLGLFDSGLGGLTVLRRLLSQRPGQRCVYVGDTARVPYGSRDRAEIRCIAAE VVGWLREQGAEAVVMACNTTNALALDVAQSEAGVPVLGLIDAVARQVQQQRIGVLATEATASSGAYGRALQAQRQGLTIV EMGCPAFVPAVEAHQLDTPALRRAAQRYLEPLLDARVEAIVLGCSHYPLLEPMLRDLLPAGVELIDPAHALVDLTLSLFP DQRRPAIEPDLSGCRVVATGDPAEFAAGSARWLGQRPPVEQISLQPEGHGH
Specific function: Provides the (R)-glutamate required for cell wall biosynthesis [H]
COG id: COG0796
COG function: function code M; Glutamate racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate/glutamate racemases family [H]
Homologues:
Organism=Escherichia coli, GI87082355, Length=247, Percent_Identity=29.9595141700405, Blast_Score=78, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 - InterPro: IPR001920 - InterPro: IPR018187 - InterPro: IPR004391 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =5.1.1.3 [H]
Molecular weight: Translated: 31078; Mature: 30947
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSSSADALSLSLQRVATSEFTGLRPQALLGLFDSGLGGLTVLRRLLSQRPGQRCVYVG CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEC DTARVPYGSRDRAEIRCIAAEVVGWLREQGAEAVVMACNTTNALALDVAQSEAGVPVLGL CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCCHHHH IDAVARQVQQQRIGVLATEATASSGAYGRALQAQRQGLTIVEMGCPAFVPAVEAHQLDTP HHHHHHHHHHHHHCEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCHHCCHHHHCCCCH ALRRAAQRYLEPLLDARVEAIVLGCSHYPLLEPMLRDLLPAGVELIDPAHALVDLTLSLF HHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHC PDQRRPAIEPDLSGCRVVATGDPAEFAAGSARWLGQRPPVEQISLQPEGHGH CCCCCCCCCCCCCCCEEEECCCCHHHHCCCHHHCCCCCCHHHEEECCCCCCC >Mature Secondary Structure TLSSSADALSLSLQRVATSEFTGLRPQALLGLFDSGLGGLTVLRRLLSQRPGQRCVYVG CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEC DTARVPYGSRDRAEIRCIAAEVVGWLREQGAEAVVMACNTTNALALDVAQSEAGVPVLGL CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCCHHHH IDAVARQVQQQRIGVLATEATASSGAYGRALQAQRQGLTIVEMGCPAFVPAVEAHQLDTP HHHHHHHHHHHHHCEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCHHCCHHHHCCCCH ALRRAAQRYLEPLLDARVEAIVLGCSHYPLLEPMLRDLLPAGVELIDPAHALVDLTLSLF HHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHC PDQRRPAIEPDLSGCRVVATGDPAEFAAGSARWLGQRPPVEQISLQPEGHGH CCCCCCCCCCCCCCCEEEECCCCHHHHCCCHHHCCCCCCHHHEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA