| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is menB [H]
Identifier: 148242240
GI number: 148242240
Start: 1007644
End: 1008519
Strand: Direct
Name: menB [H]
Synonym: SynRCC307_1141
Alternate gene names: 148242240
Gene position: 1007644-1008519 (Clockwise)
Preceding gene: 148242239
Following gene: 148242241
Centisome position: 45.29
GC content: 62.33
Gene sequence:
>876_bases ATGGTGGGAGCAGACACCAGCTCCTTGATGGCTGTGCCCGCCTACCCATGGATCCGTCAGGGCAACTACGACGACGTGCT CTTCGAGCTGTCGGCTGATGAGGGGATTGCGCGCATCAGCATCAATCGACCTGAAAAACGCAATGCTTTTCGGCCTCGCA CCGTCAGCGAGCTGTATGACGCCTTTGCCAGGGTGCGCGATAACCCCCGCATTGGCGTGGTGCTGTTCACCGGTGCCGGT CCAGCGGCCGATGGTGCCTATGCCTTTTGCGCCGGTGGTGATCAGTCGGTGCGCGGCGATGGCGGCTACCTCGATGAGGA GGGCACCCCGCGGCTGAATGTGCTCGACCTGCAGCGCTTGATCCGCAGCCTGCCGAAGGTGGTGATTGCCTTGGTGGCTG GCTACGCCATTGGTGGCGGCCAGGTGTTGCATCTCCTTTGTGATCTGAGCATTGCGGCCGACAATGCTCAATTTGGTCAA ACCGGTCCGCGGGTTGGCAGCTTTGATGGCGGCTATGGCTGCGCCCACCTCGCCCGGCTGGTGGGCCAGCGCAAGGCACG CGAAATCTGGTTCCTCTGCCGCCGTTACAACGCTGAGCAAGCCTTGGCGATGGGGCTGGTGAACACGGTGGTTCCCCTCG CTGAGCTCGAGAGTGAGGGCCTGTGCTGGGCGCGGGAGGTGCTGCAGCACAGCCCCACAGCGATCCGCTGTCTCAAAGCC GCTTTCAACGCCGACACCGATGGCATGGCCGGATTGCAGGAATTGGCCGGGCAGGCCACCCATCTCTTCTACCGAACCGA AGAGGGCCAAGAAGGACGCAATGCCTTCCTCGAAAAACGCGCTCCAGATTTCTCCGATCAGCCCTGGCTGCCTTAA
Upstream 100 bases:
>100_bases TGCAGTGGTTGCTTGAGCCTGGTGATGCGATGCGCCTGCTGCGATGCTCCACCGACCGGTCCCGTGATGCCCAGCTGCGC CAGCAGTTGCGTGACAAGCC
Downstream 100 bases:
>100_bases ACCCTGAGAAATAAATAAAGCCTGATGAGTCCAGTGAGACGCACTGGCTAGCAGAAGGGGGAATTCCCCCTCGCCAATGA AAAGTCTGCTGGTGCCCCTG
Product: Napthoate synthase
Products: NA
Alternate protein names: DHNA-CoA synthase [H]
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MVGADTSSLMAVPAYPWIRQGNYDDVLFELSADEGIARISINRPEKRNAFRPRTVSELYDAFARVRDNPRIGVVLFTGAG PAADGAYAFCAGGDQSVRGDGGYLDEEGTPRLNVLDLQRLIRSLPKVVIALVAGYAIGGGQVLHLLCDLSIAADNAQFGQ TGPRVGSFDGGYGCAHLARLVGQRKAREIWFLCRRYNAEQALAMGLVNTVVPLAELESEGLCWAREVLQHSPTAIRCLKA AFNADTDGMAGLQELAGQATHLFYRTEEGQEGRNAFLEKRAPDFSDQPWLP
Sequences:
>Translated_291_residues MVGADTSSLMAVPAYPWIRQGNYDDVLFELSADEGIARISINRPEKRNAFRPRTVSELYDAFARVRDNPRIGVVLFTGAG PAADGAYAFCAGGDQSVRGDGGYLDEEGTPRLNVLDLQRLIRSLPKVVIALVAGYAIGGGQVLHLLCDLSIAADNAQFGQ TGPRVGSFDGGYGCAHLARLVGQRKAREIWFLCRRYNAEQALAMGLVNTVVPLAELESEGLCWAREVLQHSPTAIRCLKA AFNADTDGMAGLQELAGQATHLFYRTEEGQEGRNAFLEKRAPDFSDQPWLP >Mature_291_residues MVGADTSSLMAVPAYPWIRQGNYDDVLFELSADEGIARISINRPEKRNAFRPRTVSELYDAFARVRDNPRIGVVLFTGAG PAADGAYAFCAGGDQSVRGDGGYLDEEGTPRLNVLDLQRLIRSLPKVVIALVAGYAIGGGQVLHLLCDLSIAADNAQFGQ TGPRVGSFDGGYGCAHLARLVGQRKAREIWFLCRRYNAEQALAMGLVNTVVPLAELESEGLCWAREVLQHSPTAIRCLKA AFNADTDGMAGLQELAGQATHLFYRTEEGQEGRNAFLEKRAPDFSDQPWLP
Specific function: Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) [H]
COG id: COG0447
COG function: function code H; Dihydroxynaphthoic acid synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=280, Percent_Identity=30.3571428571429, Blast_Score=115, Evalue=5e-26, Organism=Homo sapiens, GI31542718, Length=256, Percent_Identity=30.46875, Blast_Score=99, Evalue=6e-21, Organism=Homo sapiens, GI4502327, Length=265, Percent_Identity=29.811320754717, Blast_Score=75, Evalue=7e-14, Organism=Escherichia coli, GI1788597, Length=286, Percent_Identity=63.6363636363636, Blast_Score=360, Evalue=1e-101, Organism=Escherichia coli, GI1787659, Length=259, Percent_Identity=31.6602316602317, Blast_Score=98, Evalue=7e-22, Organism=Escherichia coli, GI221142681, Length=262, Percent_Identity=31.6793893129771, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI87082183, Length=258, Percent_Identity=30.2325581395349, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1787660, Length=261, Percent_Identity=30.2681992337165, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1788682, Length=196, Percent_Identity=29.5918367346939, Blast_Score=70, Evalue=1e-13, Organism=Caenorhabditis elegans, GI25145438, Length=257, Percent_Identity=31.1284046692607, Blast_Score=108, Evalue=5e-24, Organism=Caenorhabditis elegans, GI17554946, Length=257, Percent_Identity=27.6264591439689, Blast_Score=100, Evalue=7e-22, Organism=Caenorhabditis elegans, GI17540714, Length=223, Percent_Identity=30.0448430493274, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17549921, Length=202, Percent_Identity=28.2178217821782, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17560910, Length=196, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17535521, Length=210, Percent_Identity=26.1904761904762, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI20129971, Length=270, Percent_Identity=29.2592592592593, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI24653477, Length=270, Percent_Identity=29.2592592592593, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI24653139, Length=285, Percent_Identity=30.8771929824561, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI21357171, Length=213, Percent_Identity=29.1079812206573, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI19922422, Length=270, Percent_Identity=23.7037037037037, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24654903, Length=208, Percent_Identity=26.4423076923077, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24650670, Length=256, Percent_Identity=26.171875, Blast_Score=64, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 - InterPro: IPR010198 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.1.3.36 [H]
Molecular weight: Translated: 31603; Mature: 31603
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGADTSSLMAVPAYPWIRQGNYDDVLFELSADEGIARISINRPEKRNAFRPRTVSELYD CCCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCCEEEEEECCCHHCCCCCCCHHHHHHH AFARVRDNPRIGVVLFTGAGPAADGAYAFCAGGDQSVRGDGGYLDEEGTPRLNVLDLQRL HHHHHCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHH IRSLPKVVIALVAGYAIGGGQVLHLLCDLSIAADNAQFGQTGPRVGSFDGGYGCAHLARL HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH VGQRKAREIWFLCRRYNAEQALAMGLVNTVVPLAELESEGLCWAREVLQHSPTAIRCLKA HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHH AFNADTDGMAGLQELAGQATHLFYRTEEGQEGRNAFLEKRAPDFSDQPWLP HHCCCCCHHHHHHHHCCHHHEEEEECCCCCCHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MVGADTSSLMAVPAYPWIRQGNYDDVLFELSADEGIARISINRPEKRNAFRPRTVSELYD CCCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCCEEEEEECCCHHCCCCCCCHHHHHHH AFARVRDNPRIGVVLFTGAGPAADGAYAFCAGGDQSVRGDGGYLDEEGTPRLNVLDLQRL HHHHHCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHH IRSLPKVVIALVAGYAIGGGQVLHLLCDLSIAADNAQFGQTGPRVGSFDGGYGCAHLARL HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH VGQRKAREIWFLCRRYNAEQALAMGLVNTVVPLAELESEGLCWAREVLQHSPTAIRCLKA HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHH AFNADTDGMAGLQELAGQATHLFYRTEEGQEGRNAFLEKRAPDFSDQPWLP HHCCCCCHHHHHHHHCCHHHEEEEECCCCCCHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]