Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

Click here to switch to the map view.

The map label for this gene is 148242163

Identifier: 148242163

GI number: 148242163

Start: 959094

End: 959318

Strand: Direct

Name: 148242163

Synonym: SynRCC307_1064

Alternate gene names: NA

Gene position: 959094-959318 (Clockwise)

Preceding gene: 148242162

Following gene: 148242166

Centisome position: 43.11

GC content: 44.44

Gene sequence:

>225_bases
TTGAAACTTTCCCTTGGCGGGATATTTTTTAATGTTGATCTATTCAAAGAACTCGTAAGCGTGTTTGATTTCGCCGTCGA
GTGGCCCAGAGTGGCAATTGAAATGTGTTGCGTGACGGGGGCCATTATTTTGGGTAGACGCTTTCAAGAAGCCTCGTTTT
TTGCCGCAACCTTTTTGATCGGGCTCACGATTGTTGAGTTGTTCCTCGGTTTTGTTGTTGATTGA

Upstream 100 bases:

>100_bases
TCAGGCATGGCATTGATCACAGCAGGGGTGGTGATGGTGAATATCACAGGCCAGCTCAAGGGCTGAGGTTTTGTACAATT
GCTCGTGAAACATGTAGCTT

Downstream 100 bases:

>100_bases
TCAGCTGTTGACGTCGCCTGTAGAGAGTCGTTGTTTGATCTCAGCCATGACTTGATTGGCTTGCTCGCTGATCACATGGG
CTTGCTGTGCATCAGCGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 74

Protein sequence:

>74_residues
MKLSLGGIFFNVDLFKELVSVFDFAVEWPRVAIEMCCVTGAIILGRRFQEASFFAATFLIGLTIVELFLGFVVD

Sequences:

>Translated_74_residues
MKLSLGGIFFNVDLFKELVSVFDFAVEWPRVAIEMCCVTGAIILGRRFQEASFFAATFLIGLTIVELFLGFVVD
>Mature_74_residues
MKLSLGGIFFNVDLFKELVSVFDFAVEWPRVAIEMCCVTGAIILGRRFQEASFFAATFLIGLTIVELFLGFVVD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8270; Mature: 8270

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSLGGIFFNVDLFKELVSVFDFAVEWPRVAIEMCCVTGAIILGRRFQEASFFAATFLI
CCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLTIVELFLGFVVD
HHHHHHHHHHHHCC
>Mature Secondary Structure
MKLSLGGIFFNVDLFKELVSVFDFAVEWPRVAIEMCCVTGAIILGRRFQEASFFAATFLI
CCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLTIVELFLGFVVD
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA