| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242142
Identifier: 148242142
GI number: 148242142
Start: 946093
End: 946590
Strand: Direct
Name: 148242142
Synonym: SynRCC307_1043
Alternate gene names: NA
Gene position: 946093-946590 (Clockwise)
Preceding gene: 148242137
Following gene: 148242145
Centisome position: 42.52
GC content: 60.64
Gene sequence:
>498_bases ATGGAAGGCGTTGTGCTGGCTGTGTTGACTTCGTTGCTTGCAGCGGCGTTGCCTTGGCAACCAACTGAATTGGTGCTCGA ACGCAGCAAACGGCAACTGCGGGTGATTCAAAACGGCCGCCAAATTGCCAGTTATCCCGTGGCGGTGGGGCGCGCCACCA ATCCCACACCACTGGGCACCCACCGGGTGCATCGCCTCGAGAAAGATCCCATCTGGAGCAGCCCCTGGCGCAAAAGGCAG GTGGCGGCATCAGCCACTGGGCCCTTAGGAACCCGCTGGATTGGTTTTTGGTATCGCTGCGGCAAGCGCAGCTCCACCGA TCGCCGGCCGCCGCGGTTTGAAGCCGACAACTGCCGCGAGATTGGATTTCACGGCACCGGCAAGCTCAGCAGCATTGGCC AGGCGGCCACCTTTGGTTGCGTGCGTTTGCGCAATCAAGACGCTATTTCCCTCTTTGATCTCGTCAAAGAGGGCGACATC GTGCGTGTGGTGCCCTAG
Upstream 100 bases:
>100_bases TGATTTCTAGAGGTGCTGTTAGTCATTCCTGGAAGGAATTTCTCAGCGGTCTTTCAGCTGCCTCGACGCACAGCACTCGC ACAATCAGGCACATCACCGG
Downstream 100 bases:
>100_bases TTAGGCGGCCGCGCTGCGGCGTTGCTGCAGGCCCCAAGCCACAGCACCGGCGCTGATCACCACCAGCGCGCCACTGGTGA CCAAGAAGCTGAGGGTGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG Family; Protein ErfK/SrfK; ErfK/YbiS/YcfS/YnhG Superfamily
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MEGVVLAVLTSLLAAALPWQPTELVLERSKRQLRVIQNGRQIASYPVAVGRATNPTPLGTHRVHRLEKDPIWSSPWRKRQ VAASATGPLGTRWIGFWYRCGKRSSTDRRPPRFEADNCREIGFHGTGKLSSIGQAATFGCVRLRNQDAISLFDLVKEGDI VRVVP
Sequences:
>Translated_165_residues MEGVVLAVLTSLLAAALPWQPTELVLERSKRQLRVIQNGRQIASYPVAVGRATNPTPLGTHRVHRLEKDPIWSSPWRKRQ VAASATGPLGTRWIGFWYRCGKRSSTDRRPPRFEADNCREIGFHGTGKLSSIGQAATFGCVRLRNQDAISLFDLVKEGDI VRVVP >Mature_165_residues MEGVVLAVLTSLLAAALPWQPTELVLERSKRQLRVIQNGRQIASYPVAVGRATNPTPLGTHRVHRLEKDPIWSSPWRKRQ VAASATGPLGTRWIGFWYRCGKRSSTDRRPPRFEADNCREIGFHGTGKLSSIGQAATFGCVRLRNQDAISLFDLVKEGDI VRVVP
Specific function: Unknown
COG id: COG1376
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18369; Mature: 18369
Theoretical pI: Translated: 11.38; Mature: 11.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGVVLAVLTSLLAAALPWQPTELVLERSKRQLRVIQNGRQIASYPVAVGRATNPTPLGT CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEECCCCEEECCCCCCCCCCH HRVHRLEKDPIWSSPWRKRQVAASATGPLGTRWIGFWYRCGKRSSTDRRPPRFEADNCRE HHHHHCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEE IGFHGTGKLSSIGQAATFGCVRLRNQDAISLFDLVKEGDIVRVVP CCCCCCCCCHHCCHHHHHHHEEECCCCHHHHHHHHCCCCEEEECC >Mature Secondary Structure MEGVVLAVLTSLLAAALPWQPTELVLERSKRQLRVIQNGRQIASYPVAVGRATNPTPLGT CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEECCCCEEECCCCCCCCCCH HRVHRLEKDPIWSSPWRKRQVAASATGPLGTRWIGFWYRCGKRSSTDRRPPRFEADNCRE HHHHHCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEE IGFHGTGKLSSIGQAATFGCVRLRNQDAISLFDLVKEGDIVRVVP CCCCCCCCCHHCCHHHHHHHEEECCCCHHHHHHHHCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA