| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242082
Identifier: 148242082
GI number: 148242082
Start: 902757
End: 903242
Strand: Direct
Name: 148242082
Synonym: SynRCC307_0983
Alternate gene names: NA
Gene position: 902757-903242 (Clockwise)
Preceding gene: 148242081
Following gene: 148242083
Centisome position: 40.57
GC content: 60.91
Gene sequence:
>486_bases ATGAGCGTCTGTCCGGTGCCGGCGGAACAACAACCCCTGCGCCAGTACGAGGAACTGACCGCGTCTTGGTTTTTTCGGTG GCCTTCCACCAGTTTTGCGGCCTTGAGCCGCCGGCTAGCCCAGGGTTGGTTGCTGCTGCTGCCGATCACCTTGTTGGTGG CCAGCGGCAGCATTCCGTTGCGCCACGACATGCCGCGGTTGTTTGCCGCTGGTGCCGTTTCCGCCTTGGTGCTGCCTTTG CTTCTCTTGGTGCGTCAGTGGCTGGGCTGGACCTATGTGCATCGCCGCTTGATGCGAGAGCGCATCACCTATGAGGAATC GGGTTGGTACGACGGGCAGGAGTGGGAGAAGCCCTTGGAGTGGCGTGAGAAAGATCTGTTGATTGCTCAACATCAGGTGA GGCCTGTGCTGGGCCGTTTGCTGCGGGCTATCAGTGTTTTGGCTGCGCTACTGCTGTGGGGCGCCAGCCTCTGCCAGGCT CTTTGA
Upstream 100 bases:
>100_bases AGAAGAACGCAGTTACTACGATCTGGAGGCTTTCTGGGGACACGGAACAACTGTTCCTTTTGTCTCTGCGGTGGCGTCGA CTGGATCTTCAACCTGAACC
Downstream 100 bases:
>100_bases GATCGGCACCGACGCATGACGTCATCGATGGGTCTTAGTGGTTCCAGCCTTGCGGGCCATCCCCCGCTGGAGGTGCGGCT GCTGCGCGATGGGATGACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MSVCPVPAEQQPLRQYEELTASWFFRWPSTSFAALSRRLAQGWLLLLPITLLVASGSIPLRHDMPRLFAAGAVSALVLPL LLLVRQWLGWTYVHRRLMRERITYEESGWYDGQEWEKPLEWREKDLLIAQHQVRPVLGRLLRAISVLAALLLWGASLCQA L
Sequences:
>Translated_161_residues MSVCPVPAEQQPLRQYEELTASWFFRWPSTSFAALSRRLAQGWLLLLPITLLVASGSIPLRHDMPRLFAAGAVSALVLPL LLLVRQWLGWTYVHRRLMRERITYEESGWYDGQEWEKPLEWREKDLLIAQHQVRPVLGRLLRAISVLAALLLWGASLCQA L >Mature_160_residues SVCPVPAEQQPLRQYEELTASWFFRWPSTSFAALSRRLAQGWLLLLPITLLVASGSIPLRHDMPRLFAAGAVSALVLPLL LLVRQWLGWTYVHRRLMRERITYEESGWYDGQEWEKPLEWREKDLLIAQHQVRPVLGRLLRAISVLAALLLWGASLCQAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18542; Mature: 18411
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVCPVPAEQQPLRQYEELTASWFFRWPSTSFAALSRRLAQGWLLLLPITLLVASGSIPL CCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RHDMPRLFAAGAVSALVLPLLLLVRQWLGWTYVHRRLMRERITYEESGWYDGQEWEKPLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH WREKDLLIAQHQVRPVLGRLLRAISVLAALLLWGASLCQAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SVCPVPAEQQPLRQYEELTASWFFRWPSTSFAALSRRLAQGWLLLLPITLLVASGSIPL CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RHDMPRLFAAGAVSALVLPLLLLVRQWLGWTYVHRRLMRERITYEESGWYDGQEWEKPLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH WREKDLLIAQHQVRPVLGRLLRAISVLAALLLWGASLCQAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA